Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4344029   H/ACA ribonucleoprotein complex subunit 4 
 osa-r.5   4344029   H/ACA ribonucleoprotein complex subunit 4 
 osa-m.8   4344029   H/ACA ribonucleoprotein complex subunit 4 
 osa-u.4   4332935   H/ACA ribonucleoprotein complex subunit 4 
 ath-u.4   NAP57   homologue of NAP57 
 gma-u.4   100780706   H/ACA ribonucleoprotein complex subunit 4 
 gma-u.4   100806355   H/ACA ribonucleoprotein complex subunit 4 
 sly-u.4   101255259   H/ACA ribonucleoprotein complex subunit 4 
 ppo-u.4   7473584   H/ACA ribonucleoprotein complex subunit 4 
 ppo-u.4   7458946   H/ACA ribonucleoprotein complex subunit 4 
 mtr-u.4   25492817   H/ACA ribonucleoprotein complex subunit 4 

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Top 50 coexpressed genes to 4344029 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  10 85 14.74
 osa3010   Ribosome  10 336 8.76
 osa3013   Nucleocytoplasmic transport  2 109 -

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osa:LOC4344029 (H/ACA ribonucleoprotein complex subunit 4) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4344029
osa-r.5
for
4344029
osa-m.8
for
4344029
osa-u.4
for
4332935
ath-u.4
for
NAP57
gma-u.4
for
100780706
gma-u.4
for
100806355
sly-u.4
for
101255259
ppo-u.4
for
7473584
ppo-u.4
for
7458946
mtr-u.4
for
25492817
1 LOC4332935 H/ACA ribonucleoprotein complex subunit 4 4332935 Os03g0370500 15.8 17.6
 14.0
 15.8
18.9
 18.9
22.5
 22.5
2 LOC4332851 nucleolar protein 56 4332851 Os03g0352300 12.8 14.4
 11.3
 10.6
0.9
 18.3
11.1
 11.0
10.0
 15.3
12.6
 11.6
 12.0
10.7
 12.3
10.6
 9.8
3 LOC4342750 protein SLOW WALKER 1 4342750 Os07g0224900 9.8 9.6
 10.0
 9.0
 9.2
 8.7
8.1
 10.0
8.4
 6.0
 6.9
5.7
 6.6
5.6
 9.7
4 LOC4339823 histone deacetylase HDT2 4339823 Os05g0597100 9.7 10.5
 9.0
 7.7
 10.4
10.3
 10.9
8.7
 10.9
9.0
 6.6
5.5
 6.1
4.1
 6.6
4.5
 5.4
2.1
5 LOC4332841 probable nucleolar protein 5-2 4332841 Os03g0350300 9.6 9.4
 9.7
 7.8
7.5
 20.2
13.6
 10.7
10.5
 11.0
10.6
 17.5
5.6
 12.5
10.0
 13.5
10.1
 8.7
7.9
6 LOC4332840 probable nucleolar protein 5-2 4332840 Os03g0350100 9.3 11.2
 7.5
 7.8
7.5
 20.2
13.6
 10.7
10.5
 11.0
10.6
 17.5
5.6
 12.5
10.0
 13.5
10.1
 8.7
7.9
7 LOC4344865 nucleolin 1-like 4344865 OSNPB_080192900 8.9 9.5
 8.3
 8.3
5.5
 11.1
1.5
 11.4
10.8
 13.7
13.3
 9.4
 8.7
8.7
 9.1
9.1
 8.2
8 LOC4347787 25S rRNA (cytosine-C(5))-methyltransferase nop2 4347787 Os09g0551300 8.9 9.0
 8.8
 5.8
3.1
 11.3
5.1
 9.8
6.6
 9.4
8.9
 9.4
4.3
 9.1
 8.8
 7.2
9 LOC4338508 importin subunit beta-1 4338508 Os05g0353400 8.8 8.6
 9.1
 7.1
0.7
 4.0
2.3

3.8
 3.0
1.7
 3.8
2.0
10 LOC4335968 peptidyl-prolyl cis-trans isomerase FKBP53 4335968 Os04g0446500 8.6 9.2
 8.0
 7.2
3.5
 7.2
4.5
 11.2
6.7
 10.2
8.2
 12.3
5.9
 8.8
6.7
 8.5
7.4
 8.6
5.9
11 LOC4325458 uncharacterized protein At2g39795, mitochondrial 4325458 Os01g0143300 8.4 9.1
 7.6
 7.1
 8.0
5.1
 9.7
7.8
 9.3
8.9
 7.8
 6.7
6.2
 6.4
6.1
 8.5
6.7
12 LOC4333677 acidic leucine-rich nuclear phosphoprotein 32-related protein 2-like 4333677 OSNPB_030668900 8.2 7.1
 9.3
 8.6






13 LOC4324661 RGG repeats nuclear RNA binding protein A 4324661 Os01g0721900 8.2 8.9
 7.5
 7.0
4.1
 6.1
0.8
 8.4
8.1
 8.3
7.4
 8.1
5.7
 6.8
6.4
 6.0
5.9
 7.4
5.1
14 LOC4352781 nucleolar and coiled-body phosphoprotein 1 4352781 Os12g0613500 8.2 8.9
 7.4
 7.1
 5.9
 6.8
6.4
 5.5
5.3
 6.8
 7.9
6.9
 7.6
6.2
 8.3
15 LOC4340089 protein arginine N-methyltransferase PRMT10-like 4340089 OSNPB_060142800 8.0 7.4
 8.5
 7.3
 6.9
 2.9
2.7
 3.0
2.5
 3.1
 2.3
 2.3
 6.6
16 LOC4326297 something about silencing protein 10 4326297 Os01g0104800 8.0 8.5
 7.4
 6.3
 8.1
 5.5
2.5
 6.4
3.1
 5.8
1.8
 6.1
 7.1
 4.1
17 LOC4328001 U3 small nucleolar RNA-associated protein 6 homolog 4328001 Os02g0103900 7.9 7.7
 8.1
 7.0
 5.2
 6.4
4.9
 7.7
5.9
 3.9
 6.7
 6.2
 5.2
18 LOC4342563 60S ribosomal protein L4-1 4342563 Os07g0180900 7.6 8.7
 6.5
 7.2
4.9
 8.1
6.1
 11.0
7.3
 9.4
6.9
 7.7
6.7
 5.1
4.4
 5.4
4.8
 9.3
8.0
19 LOC4341310 T-complex protein 1 subunit epsilon 4341310 Os06g0562600 7.6 8.3
 6.8
 5.9
 5.6
 10.2
9.8
 10.3
9.3
 6.6
 5.6
2.5
 5.9
3.4
 8.3
20 LOC4324671 40S ribosomal protein S24-1 4324671 Os01g0723200 7.6 8.3
 6.8
 6.6
4.7
 3.0
1.7
 8.5
6.7
 6.1
4.8
 7.6
7.1
 6.0
5.4
 5.7
5.4
 4.8
21 LOC4340741 H/ACA ribonucleoprotein complex subunit 2-like protein 4340741 Os06g0274200 7.5 6.4
 8.7
 8.1
1.1
 7.2
 5.3
4.5
 4.2
3.9
 7.4
 5.7
 6.5
 7.2
22 LOC4326038 eukaryotic translation initiation factor 3 subunit A 4326038 Os01g0120800 7.5 8.2
 6.8
 6.4
 4.9
 9.5
5.4
 6.3
4.6
 5.1
2.8
 7.9
5.8
 8.0
4.9
 6.0
23 LOC4343215 probable rRNA-processing protein EBP2 homolog 4343215 Os07g0475800 7.5 8.3
 6.7
 7.0
 10.0
 8.2
6.8
 9.5
7.7
 10.7
9.3
 8.1
 6.7
 6.6
3.3
24 LOC4328041 pentatricopeptide repeat-containing protein At2g37230 4328041 Os02g0110400 7.5 7.6
 7.4
 6.5
 6.6
 6.6
4.4
 7.8
4.7
 7.1
 5.0
 5.0
 8.2
25 LOC4324115 guanine nucleotide-binding protein subunit beta-like protein A 4324115 OSNPB_010686800 7.5 8.3
 6.6
 6.7
6.2
 7.4
6.3
 8.9
7.5
 7.8
7.5
 6.8
5.1
 5.3
4.7
 4.7
4.1
 7.6
26 LOC4329831 60S ribosomal protein L6-3 4329831 Os02g0591700 7.2 8.5
 5.9
 6.4
5.2
 5.9
4.5
 8.3
7.9
 7.0
6.4
 8.5
5.1
 4.8
4.7
 5.1
3.9
 5.5
4.7
27 LOC4329957 pentatricopeptide repeat-containing protein At1g79540 4329957 Os02g0611400 7.2 7.6
 6.8
 6.5
 5.0
 9.8
5.9
 9.1
6.1
 5.0
 4.3
 4.4
 9.2
28 LOC4344162 30S ribosomal protein S9, mitochondrial 4344162 Os07g0658200 7.1 7.1
 7.2
 5.0
 6.2
 6.3
5.2
 5.1
4.1
 4.8
 5.3
 4.9
 6.4
29 LOC4331735 TATA-binding protein-associated factor 2N 4331735 Os03g0166000 7.0 6.3
 7.8
 7.2
6.4
 4.5
2.9
 6.8
4.4
 6.8
4.0
 4.3
3.8
 4.6
4.0
 3.8
3.8
 5.0
3.7
30 LOC4340910 uncharacterized protein At2g39795, mitochondrial 4340910 Os06g0326500 7.0 6.1
 7.9
 6.4






31 LOC4343836 U3 small nucleolar RNA-associated protein 18 homolog 4343836 Os07g0603200 7.0 5.3
 8.6
 5.9
 8.6
 7.4
7.2
 8.5
7.9
 7.8
 5.4
 6.0
 4.1
3.0
32 LOC4329362 40S ribosomal protein S27 4329362 Os02g0478700 7.0 8.5
 5.5
 5.9
3.9
 2.5
2.3
 5.0
4.9
 4.6
3.1
 3.8
 3.7
3.1
 3.6
3.3
 3.7
2.1
33 LOC4327989 uncharacterized LOC4327989 4327989 Os02g0102400 6.9 7.2
 6.6
 6.3
 7.1
 4.0
3.0
 4.0
4.0
 7.2
 7.2
 8.0
 5.9
34 LOC4329832 ribosome biogenesis protein BRX1 homolog 2 4329832 Os02g0591800 6.9 7.3
 6.6
 7.3
 9.1
4.4
 4.5
3.5
 5.6
2.3
 7.1
 4.7
1.6
 4.8
1.9
 8.5
4.2
35 LOC4343842 pentatricopeptide repeat-containing protein PNM1, mitochondrial 4343842 Os07g0603900 6.9 7.3
 6.5
 5.2
 8.8
 7.5
5.4
 5.7
4.9
 5.7
 6.2
 6.4
 5.6
36 LOC4332793 60S ribosomal protein L18-3 4332793 Os03g0341100 6.9 7.4
 6.4
 6.4
4.8
 4.6
4.2
 8.2
8.0
 6.8
6.2
 6.3
4.0
 5.2
4.8
 4.9
4.1
 4.9
3.2
37 LOC4343835 ras GTPase-activating protein-binding protein 2 4343835 Os07g0603100 6.9 6.5
 7.2
 6.8






38 LOC4327779 exportin-2 4327779 Os01g0235400 6.9 7.0
 6.7
 5.8
 2.2
 5.3
4.1
 5.6
4.2
 2.9
 2.6
2.0
 2.5
1.4
 4.8
39 LOC4325442 guanine nucleotide-binding protein-like NSN1 4325442 Os01g0375000 6.8 7.9
 5.7
 6.7
 13.8
 6.6
6.6
 9.8
5.7
 11.8
5.1
 6.4
 5.6
 8.0
40 LOC4331181 mediator of RNA polymerase II transcription subunit 36a 4331181 Os02g0821800 6.7 6.1
 7.4
 6.8
6.8
 12.1
8.2
 8.5
8.4
 10.5
8.5
 11.5
 9.0
7.8
 10.1
8.5
 9.0
5.1
41 LOC4338602 nascent polypeptide-associated complex subunit alpha-like protein 1 4338602 Os05g0373700 6.7 8.0
 5.4
 5.3
3.6
 5.0
3.0
 7.3
5.5
 5.2
5.2
 5.3
4.9
 6.1
5.1
 6.1
5.4
 5.4
2.5
42 LOC4337802 T-complex protein 1 subunit zeta 1 4337802 Os05g0147400 6.7 6.8
 6.5
 4.9
 3.8
3.0
 7.0
6.7
 8.4
5.9
 5.9
4.5
 5.0
4.8
 5.0
4.5
 5.5
43 LOC4339923 60S ribosomal protein L13-1 4339923 Os06g0115500 6.7 7.1
 6.2
 6.5
3.2
 4.7
2.7
 6.5
6.4
 6.1
4.8
 7.1
5.4
 4.7
4.6
 4.9
4.8
 5.6
5.2
44 LOC4342510 uncharacterized LOC4342510 4342510 Os07g0170300 6.6 6.8
 6.4
 6.1
 7.8


2.6
 3.8
 3.2
45 LOC4339625 60S ribosomal protein L18a-like 4339625 Os05g0565000 6.6 7.3
 5.9
 6.3
4.6
 3.2
3.1
 7.4
6.9
 7.2
5.4
 6.6
5.5
 6.3
3.5
 6.5
3.7
 4.8
4.3
46 LOC4340823 39S ribosomal protein L46, mitochondrial 4340823 Os06g0300600 6.5 6.0
 7.0
 6.2
 3.6
 3.2
1.8
 2.6
1.7
 2.8
2.3
 1.5
 1.6
 1.5
1.4
47 LOC4333016 40S ribosomal protein S6 4333016 Os03g0390000 6.5 7.3
 5.7
 5.5
5.3
 5.9
4.3
 6.7
6.3
 6.5
5.0
 6.5
6.4
 4.5
3.7
 4.6
3.9
 4.5
4.4
48 LOC4338555 pentatricopeptide repeat-containing protein At1g10270 4338555 Os05g0365500 6.5 5.0
 8.0
 5.3
 5.4
1.6
 6.6
5.5
 7.1
6.6
 4.0
 3.7
2.3
 4.2
2.2
 5.2
49 LOC4337032 nucleolin 2-like 4337032 OSNPB_040620700 6.5 7.1
 5.9
 8.3
5.5
 11.1
1.5
 11.4
10.8
 13.7
13.3
 9.4
 8.7
8.7
 9.1
9.1
 8.2
50 LOC4342672 uncharacterized LOC4342672 4342672 Os07g0202900 6.5 6.2
 6.7
 5.5
 2.3
 4.0
3.8
 5.1
4.6
 2.8
 3.6
 3.5
 4.1
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