Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4344231   xylose isomerase 
 osa-r.5   4344231   xylose isomerase 
 osa-m.8   4344231   xylose isomerase 
 ath-u.4   AT5G57655   xylose isomerase family protein 
 gma-u.4   100804624   xylose isomerase 
 sly-u.4   101266649   xylose isomerase 
 ppo-u.4   7488994   xylose isomerase 
 mtr-u.4   11445818   xylose isomerase 

close


Top 50 coexpressed genes to 4344231 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa1230   Biosynthesis of amino acids  5 220 4.01
 osa511   Other glycan degradation  4 17 7.39
 osa280   Valine, leucine and isoleucine degradation  4 45 5.61
 osa220   Arginine biosynthesis  3 34 4.30
 osa52   Galactose metabolism  3 52 3.74

close


osa:LOC4344231 (xylose isomerase) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4344231
osa-r.5
for
4344231
osa-m.8
for
4344231
ath-u.4
for
AT5G57655
gma-u.4
for
100804624
sly-u.4
for
101266649
ppo-u.4
for
7488994
mtr-u.4
for
11445818
1 LOC4350617 probable alpha-mannosidase At5g13980 4350617 Os11g0525600 7.0 5.9
 8.0
 3.0
1.8
 3.4
1.8
 2.4
 6.4
3.3
 4.1
4.0
2 LOC4323975 uncharacterized LOC4323975 4323975 Os01g0518500 6.4 6.1
 6.7
 1.2
 2.5
1.3
 1.4
 1.8
-0.6
 5.6
1.6
3 LOC4332736 hydroxyacylglutathione hydrolase cytoplasmic 4332736 Os03g0332400 6.2 5.4
 7.0
 1.5
 1.8
 -0.3
 3.3
 1.8
4 LOC4328608 uncharacterized LOC4328608 4328608 Os02g0195500 5.5 4.0
 7.0
 1.9
1.8
 1.5
0.6
 -0.0
 0.5
-1.8
 0.4
5 LOC4334035 CBS domain-containing protein CBSX3, mitochondrial 4334035 Os03g0737000 5.4 5.1
 5.8
 6.1
 1.7
0.5
 2.3
 4.4
0.9
 3.5
6 LOC4348138 aldose 1-epimerase 4348138 Os10g0155500 5.4 5.0
 5.8
 0.6
 2.0
1.9
 4.4
 1.9
0.6
 2.3
7 LOC4336428 IAA-amino acid hydrolase ILR1-like 5 4336428 OSNPB_040521800 5.3 6.0
 4.5
 1.5
 -0.4
 1.6
 1.8
0.1
 0.2
8 LOC4344267 probable acyl-CoA dehydrogenase IBR3 4344267 Os07g0675000 5.1 4.4
 5.8
 2.0
 4.1
2.4
 2.3
0.8
 2.8
1.1
 1.2
9 LOC9269231 ornithine carbamoyltransferase, chloroplastic 9269231 Os02g0704800 5.0 5.5
 4.6
 -0.6
 0.6
-0.2
 1.5
0.0
 -0.6
 -0.4
-0.7
10 LOC4340612 protein CREG1 4340612 Os06g0238300 5.0 4.5
 5.6
 2.9
 0.5
 -0.2
 0.5
 1.1
11 LOC4331284 palmitoyl-protein thioesterase 1 4331284 Os03g0101100 4.9 5.0
 4.8
 2.7
 0.4
0.1
 1.3
-0.2
 1.2
0.9
 3.0
1.5
12 LOC4341424 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial 4341424 Os06g0594100 4.9 4.8
 5.0
 3.2
-0.4
 2.1
1.5
 0.3
 0.1
 -0.1
13 LOC4350245 dehydrogenase/reductase SDR family member 7 4350245 Os11g0265400 4.8 5.0
 4.6
 2.7
 0.6
-0.3
 0.3
 1.1
 2.1
14 LOC4349092 probable serine protease EDA2 4349092 Os10g0511400 4.7 4.7
 4.8
 1.5
0.2
 3.1
0.7
 2.3
 1.8
1.3
 2.3
1.4
15 LOC4341069 formate dehydrogenase 1, mitochondrial-like 4341069 OSNPB_060486800 4.7 3.6
 5.8
 4.4
 2.3
1.4
 1.9
 5.7
 2.4
16 LOC9269289 probable aldehyde dehydrogenase 9269289 Os05g0536400 4.5 4.5
 4.6
 2.1
 2.9
2.6
 4.3
 0.3
 3.5
17 LOC4326793 probable potassium transporter 2 4326793 OSNPB_010935500 4.5 4.6
 4.4
 1.2
0.6
 1.2
1.0
 2.2
-0.0
 1.3
0.3
 0.4
-0.8
18 LOC4344059 xylulose kinase 2 4344059 Os07g0640200 4.4 3.6
 5.3
 3.3
 5.5
 4.1
1.1
 5.5
 5.9
19 LOC4342610 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial 4342610 Os07g0188800 4.4 2.8
 6.1
 7.5
 0.8
0.4
 4.6
 4.4
2.0
 3.1
1.4
20 LOC4325748 beta-galactosidase 4325748 Os01g0952600 4.4 3.9
 4.8
 2.0
 6.4
 0.6
 5.3
-0.7
 0.4
21 LOC4330617 aspartyl protease APCB1 4330617 Os02g0730700 4.4 4.5
 4.2
 0.6
 0.6
-1.0
 1.5
 1.1
 -0.7
22 LOC4334774 cyclin-dependent kinase F-3-like 4334774 OSNPB_030847600 4.4 4.4
 4.3
 1.1
 1.7
1.5
 2.3
 -1.7
 1.5
23 LOC4334881 uncharacterized LOC4334881 4334881 Os03g0862100 4.3 3.0
 5.6
 0.5
-0.6
 0.3
0.0
 1.2
 1.0
0.2
 0.9
24 LOC4350785 sec-independent protein translocase protein TATB, chloroplastic-like 4350785 OSNPB_110580800 4.3 4.1
 4.5
 0.8
 2.8
0.7
 0.7
 -1.1
-1.4
 1.2
25 LOC4343286 probable (S)-ureidoglycine aminohydrolase 4343286 OSNPB_070495000 4.3 4.4
 4.1
 0.9
 1.1
0.1
 1.4
 0.1
 1.8
26 LOC4344232 probable GTP-binding protein OBGC1, chloroplastic 4344232 Os07g0669250 4.3 2.5
 6.0
 0.2
 0.8
 -0.5
 0.3
 1.8
27 LOC4330732 shikimate kinase 1, chloroplastic-like 4330732 OSNPB_020749300 4.3 4.9
 3.6
 -0.7
-0.9
 0.4
0.3
 0.6
 -0.3
-0.8
 0.2
28 LOC4352706 probable ureidoglycolate hydrolase 4352706 OSNPB_120597500 4.2 4.0
 4.4
 2.1
 0.9
0.3
 3.3
 2.0
 1.1
29 LOC4347733 uncharacterized LOC4347733 4347733 Os09g0541700 4.2 2.7
 5.7
 -0.5
 -0.0
 -0.0
 2.1
 -1.8
30 LOC4330107 thioredoxin M1, chloroplastic-like 4330107 OSNPB_020639900 4.2 3.2
 5.2
 -0.4
-0.5
 -0.3
-0.6
 1.2
0.5
 1.2
1.0
 -0.3
-0.3
31 LOC4326595 protein INVOLVED IN DE NOVO 2 4326595 Os01g0633200 4.2 5.1
 3.3
 0.7
0.7
 1.0
0.9
 1.1
0.2
 0.2
-0.1
 1.7
0.8
32 LOC4339457 beta-galactosidase 8-like 4339457 OSNPB_050539400 4.2 4.6
 3.8
 0.9
 1.3
 -0.2
 -0.0
-0.5
 0.7
33 LOC4351401 alpha-L-arabinofuranosidase 1 4351401 Os12g0128700 4.1 4.1
 4.1
 7.6
 0.3
-0.1
 4.0
 3.8
0.9
 7.9
0.9
34 LOC4347885 monodehydroascorbate reductase 3, cytosolic-like 4347885 Os09g0567300 4.1 4.8
 3.4
 1.0
0.1
 0.5
-0.1
 1.2
 2.4
 0.7
35 LOC4352110 beta-galactosidase 15-like 4352110 OSNPB_120429200 4.1 2.8
 5.4
 1.1
3.9
 3.7
 4.8
36 LOC4346012 aminoacylase-1 4346012 Os08g0511900 4.1 3.9
 4.3
 1.2
 2.0
 1.3
 0.9
0.6
 0.7
-0.4
37 P5CS1 delta-1-pyrroline-5-carboxylate synthase 1-like 4338979 OSNPB_050455500 4.1 4.4
 3.8
 2.1
0.3
 1.3
1.1
 1.9
1.1
 1.5
1.2
 0.2
-0.0
38 LOC4331017 aspartate aminotransferase, chloroplastic 4331017 Os02g0797500 4.0 4.8
 3.3
 0.5
 -0.2
-0.8
 4.1
 0.4
0.1
 1.5
39 LOC4325804 plastidic glucose transporter 4 4325804 Os01g0133400 4.0 4.7
 3.4
 3.9
 2.0
1.3
 2.7
 3.3
0.6
 1.4
0.3
40 LOC4349589 uncharacterized LOC4349589 4349589 Os11g0112800 4.0 4.5
 3.4
 5.3
-0.1
 0.5
0.1
 0.4
-1.0
 1.8
1.6
 -0.2
41 LOC4329339 cysteine proteinase 1 4329339 Os02g0469600 4.0 3.5
 4.5
 4.4
1.7
 2.1
2.0
 1.3
1.2
 2.7
1.6
 1.7
1.5
42 LOC4326503 glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a 4326503 Os01g0348600 4.0 4.1
 3.9
 2.6
 3.2
2.6
 5.8
1.1
 1.9
-0.8
 2.4
1.2
43 LOC4333280 purple acid phosphatase 18 4333280 Os03g0568900 4.0 4.3
 3.6
 1.3
 1.6
1.4
 1.2
-0.2
 1.5
0.4
 4.4
-1.5
44 LOC4328139 NADP-dependent D-sorbitol-6-phosphate dehydrogenase 4328139 Os02g0123500 3.9 4.1
 3.8
 1.2
0.4
 1.8
 1.6
 0.5
 0.1
45 LOC4352741 methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like 4352741 OSNPB_120605800 3.8 3.0
 4.7
 7.7
 2.1
0.9
 8.6
 5.9
 6.7
46 LOC4348080 alpha-mannosidase 4348080 Os10g0140200 3.8 3.3
 4.3
1.0
0.6
 -0.6
1.7
47 LOC4346369 triacylglycerol lipase 1 4346369 Os09g0103100 3.8 4.8
 2.8
 1.2
 1.7
0.3
 0.6
 2.2
 1.7
48 LOC4327800 protein usf 4327800 Os01g0531500 3.8 3.9
 3.6
 1.3
 1.8
-0.2
 -0.3
 1.1
 0.1
49 LOC4348359 cellulose synthase-like protein H1 4348359 OSNPB_100341700 3.8 3.3
 4.2
 0.5
0.4
 1.5
0.8
 0.5
 0.1
 1.7
0.6
50 LOC9267109 succinate-semialdehyde dehydrogenase, mitochondrial-like 9267109 OSNPB_020173900 3.8 2.8
 4.7
 2.5
 3.8
2.1
 3.4
 3.8
 0.4
The preparation time of this page was 1.4 [sec].