Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4344238   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 osa-r.5   4344238   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 osa-m.8   4344238   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 ath-u.4   AT4G32430   Pentatricopeptide repeat (PPR) superfamily protein 
 sly-u.4   101257644   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 mtr-u.4   11439884   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 

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Top 50 coexpressed genes to 4344238 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa240   Pyrimidine metabolism  2 62 2.12
 osa220   Arginine biosynthesis  1 36 -
 osa260   Glycine, serine and threonine metabolism  1 67 -
 osa1230   Biosynthesis of amino acids  2 234 -
 osa1240   Biosynthesis of cofactors  2 248 -

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osa:LOC4344238 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4344238
osa-r.5
for
4344238
osa-m.8
for
4344238
ath-u.4
for
AT4G32430
sly-u.4
for
101257644
mtr-u.4
for
11439884
1 LOC4352058 serine hydroxymethyltransferase 4 4352058 Os12g0409000 3.6 4.4
 2.8
 -0.2
-0.5
 -0.6
-1.7
 0.2
-1.2
2 LOC9267687 pentatricopeptide repeat-containing protein At5g43790 9267687 Os12g0128200 3.5 2.6
 4.4
 4.6
 3.7
 2.8
3 LOC9268026 pentatricopeptide repeat-containing protein At5g66631 9268026 Os01g0167750 3.4 5.2
3.7
 3.7
4 LOC4344190 putative pentatricopeptide repeat-containing protein At5g40405 4344190 Os07g0662700 3.4 3.0
 3.7


5 LOC4330860 pentatricopeptide repeat-containing protein At1g05750, chloroplastic 4330860 Os02g0769900 3.3 2.4
 4.3
 4.5
 4.6
 1.1
0.5
6 LOC4336084 uncharacterized LOC4336084 4336084 Os04g0464600 3.3 2.5
 4.1
 4.1
 -1.3
 1.2
7 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 3.3 2.4
 4.2


8 LOC4344262 pentatricopeptide repeat-containing protein At3g18020 4344262 Os07g0674300 3.3 2.9
 3.6
 6.2
 2.7
 3.3
9 LOC4334286 pentatricopeptide repeat-containing protein At2g22070 4334286 Os03g0775400 3.2 2.8
 3.6
 5.9
 3.3
10 LOC4337804 pentatricopeptide repeat-containing protein At3g05340 4337804 Os05g0147600 3.2 3.2
 3.2
 4.0
 3.0
 1.7
11 LOC4334929 pentatricopeptide repeat-containing protein At3g29230 4334929 Os04g0110500 3.2 3.7
 2.7


12 LOC4336910 putative peptidyl-tRNA hydrolase PTRHD1 4336910 Os04g0605200 3.2 3.7
 2.7
 -0.8
 0.4
 -1.1
13 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600 3.1 2.2
 4.1
0.4
 4.2
14 LOC4341594 nuclear intron maturase 4, mitochondrial 4341594 Os06g0634100 3.1 2.7
 3.5
2.4
 1.8
15 LOC9272023 pentatricopeptide repeat-containing protein At4g02820, mitochondrial 9272023 Os12g0527900 3.1 3.4
 2.8
 2.7
 2.7
 0.6
16 LOC4327605 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 4327605 Os01g0819800 3.1 2.4
 3.7
 6.1
 4.8
 5.0
17 LOC4337151 uncharacterized LOC4337151 4337151 Os04g0637500 3.0 2.4
 3.6


18 LOC4327814 pentatricopeptide repeat-containing protein At3g16610 4327814 Os01g0977400 3.0 2.2
 3.8

1.7
19 LOC4331425 pentatricopeptide repeat-containing protein At3g04760, chloroplastic 4331425 Os03g0119700 3.0 4.4

-0.5
 0.2
20 LOC4343346 ribosomal RNA small subunit methyltransferase, mitochondrial 4343346 Os07g0509600 2.9 2.2
 3.6
 1.6
 2.6
 1.8
21 LOC9268630 pentatricopeptide repeat-containing protein At2g20540 9268630 Os05g0439300 2.9 4.1
6.2
 3.6
 4.9
2.4
22 LOC4339829 protein-lysine methyltransferase METTL21D 4339829 Os06g0101100 2.8 3.7
 2.0
 1.5
 0.8
 1.0
23 LOC4351584 pentatricopeptide repeat-containing protein At4g15720 4351584 Os12g0163600 2.8 2.2
 3.5

3.3
24 LOC4334088 pentatricopeptide repeat-containing protein At3g22670, mitochondrial 4334088 Os03g0746400 2.8 2.8
 2.8
1.6
 2.5
25 LOC4334236 pentatricopeptide repeat-containing protein At5g46460, mitochondrial 4334236 Os03g0767700 2.8 1.4
 4.2
 0.8

26 LOC4333679 deoxyuridine 5'-triphosphate nucleotidohydrolase-like 4333679 Os03g0669100 2.8 3.4
 2.2
 -0.2
 0.5
0.3
 0.1
27 LOC4326542 uncharacterized tRNA/rRNA methyltransferase MRA_3618 4326542 Os01g0742000 2.8 3.9
2.1
 2.7
 1.3
28 LOC4329382 uncharacterized LOC4329382 4329382 Os02g0489500 2.7 2.7
 2.7
 0.8
 0.8
 2.7
29 LOC4342149 coiled-coil domain-containing protein 12 4342149 Os06g0730800 2.7 3.3
 2.1
 0.8
 0.0
 1.7
30 LOC4340253 proteasome subunit alpha type-4-2-like 4340253 OSNPB_060167600 2.7 1.9
 3.5
 0.3
 0.5
 -1.1
-1.5
31 LOC4346770 L-type lectin-domain containing receptor kinase IX.1 4346770 Os09g0334800 2.7 2.7
 2.7


32 LOC4330030 pentatricopeptide repeat-containing protein At3g29230 4330030 Os02g0625100 2.7 3.4



33 LOC4345374 uncharacterized LOC4345374 4345374 Os08g0360000 2.7 3.5
 1.9
 3.5
 1.7
 0.3
34 LOC4336590 acetylglutamate kinase 4336590 Os04g0550500 2.6 1.6
 3.7
 -0.6
 0.7
 1.7
35 LOC4325739 uridine 5'-monophosphate synthase-like 4325739 OSNPB_010951200 2.6 3.4
 1.9
 -0.0
 0.8
 1.8
0.7
36 LOC4327891 uncharacterized LOC4327891 4327891 Os01g0776300 2.6 3.8
 1.5


37 LOC4336211 uncharacterized LOC4336211 4336211 Os04g0485700 2.6 2.4
 2.9
 1.4
 1.4
 0.5
38 LOC4326435 L-type lectin-domain containing receptor kinase IX.1 4326435 Os01g0779300 2.6 3.4
 1.8


39 LOC4332647 pentatricopeptide repeat-containing protein At1g05750, chloroplastic 4332647 Os03g0314400 2.6 2.0
 3.1
4.3
 2.7
40 LOC4343048 uncharacterized LOC4343048 4343048 Os07g0423000 2.6 1.5
 3.7
 1.7
0.4
 -0.2
 2.1
1.6
41 LOC4350437 short integuments 2, mitochondrial 4350437 Os11g0447300 2.6 1.9
 3.2
 1.7
 2.5
1.1
 0.7
42 LOC4324326 pentatricopeptide repeat-containing protein At1g05600 4324326 Os01g0913800 2.5 2.9
 2.1
 1.8
 2.0
 0.7
-1.0
43 LOC4327795 F-box only protein 7 4327795 Os01g0530500 2.5 2.6
 2.4


44 LOC4328126 pentatricopeptide repeat-containing protein At1g02060, chloroplastic 4328126 Os02g0121900 2.5 1.9
 3.1
 2.2
 1.2
 1.0
45 LOC9272097 50S ribosomal protein L18 9272097 Os09g0549700 2.5 3.4
3.2
 -0.1
 0.6
46 LOC9268091 protein NRT1/ PTR FAMILY 8.3 9268091 Os06g0706400 2.5 2.1
 2.8


47 LOC4351951 oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 4351951 Os12g0270100 2.5 2.1
 2.8
 5.1
 4.3
 2.8
48 LOC4350212 ankyrin repeat-containing protein At5g02620 4350212 Os11g0251250 2.5 3.7

0.4
0.3
49 LOC4332866 probable diphthine methyl ester synthase 4332866 Os03g0355800 2.5 2.6
 2.4
 0.8
 1.4
 0.0
50 LOC4324450 pentatricopeptide repeat-containing protein At4g02750 4324450 Os01g0589400 2.5 3.3



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