Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   9268660   pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 osa-r.5   9268660   pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 ath-u.4   AT4G16835   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.4   100793742   pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 sly-u.4   101254512   pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 ppo-u.4   7461997   pentatricopeptide repeat-containing protein At4g16835, mitochondrial 

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Top 50 coexpressed genes to 9268660 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4136   Autophagy - other  1 42 -
 osa562   Inositol phosphate metabolism  1 64 -
 osa4070   Phosphatidylinositol signaling system  1 66 -
 osa3040   Spliceosome  1 196 -
 osa3010   Ribosome  1 353 -

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osa:LOC9268660 (pentatricopeptide repeat-containing protein At4g16835, mitochondrial) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
9268660
osa-r.5
for
9268660
ath-u.4
for
AT4G16835
gma-u.4
for
100793742
sly-u.4
for
101254512
ppo-u.4
for
7461997
1 LOC4337507 increased DNA methylation 1 4337507 Os04g0691700 4.4 5.7
 0.7
 3.0
2.1
 0.4
 0.0
2 LOC4339828 uncharacterized LOC4339828 4339828 Os06g0101000 3.8 4.9
 0.3
0.2
 1.7
1.4
 1.2
0.4
 2.3
1.5
3 LOC4334563 uncharacterized LOC4334563 4334563 Os03g0816300 3.7 4.8



4 LOC9272503 uncharacterized LOC9272503 9272503 Os06g0468400 3.4 4.8

-0.1
5 LOC4328144 uncharacterized LOC4328144 4328144 Os02g0124700 3.4 4.2
 0.6
 1.0
0.6
 0.8
 0.8
-0.9
6 LOC4340922 uncharacterized LOC4340922 4340922 Os06g0331300 3.4 4.2
 -0.1
 2.0
1.9
 1.3
 1.3
1.2
7 LOC4331732 uncharacterized LOC4331732 4331732 Os03g0165600 3.3 3.9
 2.3
0.3
 3.2
2.9
 0.8
-0.0
 1.7
0.7
8 LOC4336512 uncharacterized LOC4336512 4336512 OSNPB_040535000 3.3 3.9



9 LOC4329505 uncharacterized LOC4329505 4329505 Os02g0522700 3.3 4.7



10 LOC107279219 uncharacterized LOC107279219 107279219 3.3 4.5



11 LOC4342978 pentatricopeptide repeat-containing protein At1g63330 4342978 Os07g0300200 3.3 4.1
 0.9
0.9
 0.4
12 LOC4330309 uncharacterized LOC4330309 4330309 Os02g0677800 3.2 4.2



13 LOC4337547 vacuolar sorting protein 3 4337547 Os05g0104100 3.2 4.1
 -0.3
 2.1
1.3
 0.8
 1.6
1.0
14 LOC4324149 DNA ligase 6 4324149 Os01g0685500 3.2 4.5
 0.8
 1.0
 -0.7
 1.7
15 LOC4325848 uncharacterized LOC4325848 4325848 Os01g0552000 3.2 4.3
 0.4
 2.1
0.5
 -0.1
 1.1
16 LOC4324294 uncharacterized LOC4324294 4324294 Os01g0974300 3.2 4.1
 0.2
 2.5
2.0
 0.3
 1.1
0.4
17 LOC4343904 uncharacterized LOC4343904 4343904 Os07g0616000 3.2 4.4
 0.8
-0.2
 1.7
1.5
 0.0
-0.6
 0.7
0.4
18 LOC9266235 uncharacterized LOC9266235 9266235 3.2 4.4



19 LOC4350304 uncharacterized LOC4350304 4350304 Os11g0292050 3.2 4.4
 0.7
0.0
 0.7
0.2
 0.6
 0.7
0.4
20 LOC9266524 SWI/SNF complex subunit SWI3C 9266524 Os12g0176700 3.2 4.1
 -0.1
 1.1
-0.4
 0.7
 1.7
1.3
21 LOC4341090 pentatricopeptide repeat-containing protein At4g13650 4341090 Os06g0493801 3.2 4.4



22 LOC4329202 uncharacterized LOC4329202 4329202 3.2 4.3



23 LOC4326018 putative pentatricopeptide repeat-containing protein At3g01580 4326018 Os01g0357800 3.1 4.0



24 LOC4342524 uncharacterized LOC4342524 4342524 Os07g0173400 3.1 4.2
 0.6
0.6
 2.2
1.3
 1.5
1.2
 1.9
1.8
25 LOC4335104 uncharacterized protein KIAA0930 homolog 4335104 Os04g0183100 3.1 4.2
 -1.0
 -1.1
-1.4
 -1.3
 -2.3
26 LOC4337825 probable chromatin-remodeling complex ATPase chain 4337825 Os05g0150300 3.1 4.1
 -0.4
-1.2
 1.3
0.9
 1.9
0.5
 1.1
1.1
27 LOC4342011 protein DETOXIFICATION 16 4342011 Os06g0707100 3.1 3.8
 0.2
 1.4
1.0
 0.8
-0.3
 -0.9
-1.3
28 LOC4328044 uncharacterized LOC4328044 4328044 Os02g0110700 3.1 3.6
 -0.7
 1.9
1.8
 1.0
0.6
 1.4
0.8
29 LOC4330879 protein NRDE2 homolog 4330879 Os02g0772500 3.1 3.6
 1.1
-0.4
 1.0
0.6
 0.8
 0.4
30 LOC4326258 uncharacterized LOC4326258 4326258 Os01g0650800 3.1 4.1
-0.1

31 LOC4352326 disease resistance protein RGA2 4352326 Os12g0511400 3.1 4.1



32 LOC9267215 uncharacterized LOC9267215 9267215 3.1 4.3



33 LOC4346453 uncharacterized LOC4346453 4346453 3.0 3.7



34 LOC4332056 uncharacterized LOC4332056 4332056 Os03g0214900 3.0 3.8
 1.0
 1.5
1.5
 1.2
 3.2
0.6
35 LOC4345232 phosphatidylinositol 3-kinase, root isoform 4345232 Os08g0307540 3.0 3.5



36 LOC4348528 uncharacterized LOC4348528 4348528 Os10g0391100 3.0 3.6
 -0.1
 1.2
0.7
 1.4
 1.5
0.7
37 LOC9267502 uncharacterized LOC9267502 9267502 Os05g0422300 3.0 4.4


-0.1
38 LOC4333229 uncharacterized LOC4333229 4333229 3.0 4.5



39 LOC107275761 protein RRP6-like 3 107275761 Os07g0513100 3.0 4.0
 0.5
 0.8
 1.3
 0.2
40 LOC9271383 uncharacterized LOC9271383 9271383 3.0 3.6



41 LOC4329138 uncharacterized LOC4329138 4329138 3.0 4.0



42 LOC4330137 pentatricopeptide repeat-containing protein At2g26790, mitochondrial 4330137 Os02g0644600 3.0 4.5



43 LOC107276755 probable LRR receptor-like serine/threonine-protein kinase At3g47570 107276755 Os12g0620000 2.9 4.0
 1.5
0.8
 0.7
0.1
 -0.2
-0.5
 -0.0
-0.1
44 LOC9271545 pentatricopeptide repeat-containing protein At1g09410, mitochondrial 9271545 2.9 4.2



45 LOC4331556 splicing factor U2af large subunit B-like 4331556 Os03g0138100 2.9 3.5
 0.6
 2.8
0.2
 2.5
 0.2
46 LOC4337571 uncharacterized LOC4337571 4337571 Os05g0107300 2.9 3.4
 0.2
 1.2
1.1
 -0.6
 2.0
1.3
47 LOC4337365 uncharacterized LOC4337365 4337365 Os04g0672200 2.9 3.8



48 LOC4332164 probable E3 ubiquitin-protein ligase ARI2 4332164 Os03g0233500 2.9 3.8
 -0.3
-1.1
 -0.7
-1.4
 1.0
 -1.1
49 LOC4336550 uncharacterized LOC4336550 4336550 Os04g0543200 2.9 4.1
 -0.2
 2.4
1.9
 1.3
0.9
 -0.4
-1.0
50 LOC9267988 uncharacterized LOC9267988 9267988 2.9 3.7



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