Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4  4344695  vesicle-associated protein 1-2 
 osa-r.5  4344695  vesicle-associated protein 1-2 
 osa-m.8  4344695  vesicle-associated protein 1-2 
 osa-u.4  4336509  vesicle-associated protein 1-2 
 osa-u.4  4344689  vesicle-associated protein 1-3 
 ath-u.4  AT4G00170  Plant VAMP (vesicle-associated membrane protein) family protein 
 ath-u.4  PVA12  plant VAP homolog 12 
 ath-u.4  VAP27-1  vesicle associated protein 
 gma-u.4  100305725  uncharacterized LOC100305725 
 gma-u.4  100779655  vesicle-associated protein 1-2 
 gma-u.4  100798247  vesicle-associated protein 1-2 
 sly-u.4  101244994  vesicle-associated protein 1-1 
 sly-u.4  101244532  vesicle-associated protein 1-2 
 sly-u.4  101264447  vesicle-associated protein 1-2-like 
 ppo-u.4  18105191  vesicle-associated protein 1-2 
 ppo-u.4  7453954  vesicle-associated protein 1-2 
 ppo-u.4  18094564  vesicle-associated protein 1-2 
 mtr-u.4  120577098  vesicle-associated protein 1-2-like 
 mtr-u.4  11426935  vesicle-associated protein 1-2 
 mtr-u.4  11412003  vesicle-associated protein 1-2 

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Top 50 coexpressed genes to 4344695 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4141   Protein processing in endoplasmic reticulum  7 191 6.84
 osa3050   Proteasome  6 62 8.45
 osa510   N-Glycan biosynthesis  3 39 4.12
 osa4144   Endocytosis  3 144 2.46
 osa20   Citrate cycle (TCA cycle)  2 58 2.18

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osa:LOC4344695 (vesicle-associated protein 1-2) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.4
for
4344695


osa-r.5
for
4344695


osa-m.8
for
4344695


osa-u.4
for
4336509


osa-u.4
for
4344689


ath-u.4
for
AT4G00170


ath-u.4
for
PVA12


ath-u.4
for
VAP27-1


gma-u.4
for
100305725


gma-u.4
for
100779655


gma-u.4
for
100798247


sly-u.4
for
101244994


sly-u.4
for
101244532


sly-u.4
for
101264447


ppo-u.4
for
18105191


ppo-u.4
for
7453954


ppo-u.4
for
18094564


mtr-u.4
for
120577098


mtr-u.4
for
11426935


mtr-u.4
for
11412003

1 LOC4346652 ubiquitin-conjugating enzyme E2 variant 1C 4346652 Os09g0297100 6.4 6.6
6.2
1.2
1.0
2.1
1.9
2.8
2.7
3.8
3.1
4.9
4.8
2.6
2.0
2.7
2.4
0.1
-0.2
2.0
0.6
1.4
-0.2
0.9
-0.2
2.8
2.5
1.9
1.5
2.4
1.5
2.9
1.9
3.3
2 LOC4334494 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like 4334494 OSNPB_030805300 5.8 6.2
5.5
2.8
1.7
4.9
4.5
2.7
2.6
4.2
3.9
10.4
5.8
3.7
3.0
4.6
4.1
1.6
1.4
2.5
0.9
2.9
2.0
0.5
0.4
2.9
1.3
1.0
0.9
3.3
2.5
4.1
2.7
3.9
2.3
6.3
5.9
3 LOC4351755 AP-2 complex subunit sigma 4351755 Os12g0207300 5.6 5.5
5.6
2.5
4.7
3.5
4.8
1.9
1.5
1.0
2.1
1.4
1.7
0.9
1.6
3.0
-0.8
2.1
1.8
2.4
-0.6
1.7
1.4
2.8
4.1
3.0
4 LOC4343341 SH3 domain-containing protein 3 4343341 Os07g0508300 5.5 5.1
6.0
1.5
3.4
0.0
0.0
0.5
-0.1
-0.2
0.3
-0.3
0.5
-0.1
0.5
-0.2
0.5
2.2
1.2
2.1
1.4
3.0
1.6
2.8
3.6
3.3
5 LOC4334823 probable ADP-ribosylation factor GTPase-activating protein AGD9 4334823 Os03g0854100 5.4 5.1
5.6
1.3
-0.4
5.4
-0.3
2.8
0.8
4.1
1.7
2.4
2.0
2.3
1.3
3.2
2.8
0.7
0.6
1.7
1.0
2.8
-0.7
-0.3
-0.7
2.2
1.5
1.3
-0.3
2.2
1.8
4.8
-0.0
1.0
0.2
1.5
0.1
6 LOC4346507 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A 4346507 Os09g0249700 5.2 6.5
4.0
2.7
5.9
2.5
0.2
4.3
1.8
2.9
2.1
3.8
3.0
3.0
2.2
0.6
0.3
1.7
0.3
1.7
0.1
1.1
-0.2
2.1
2.0
1.4
0.7
1.2
0.9
2.0
1.6
2.7
1.0
3.5
0.9
7 LOC4332016 vesicle transport protein GOT1 4332016 Os03g0209400 5.2 6.0
4.4
2.0
1.7
4.1
3.4
5.0
1.7
3.8
0.8
2.2
2.1
3.2
2.7
1.6
0.1
2.2
1.3
1.0
1.9
1.7
1.3
0.9
1.4
0.2
1.9
1.5
1.8
0.7
3.0
1.6
8 LOC4344968 uncharacterized LOC4344968 4344968 Os08g0224200 5.2 6.5
3.9
2.3
0.4
3.8
3.3
-1.4
2.0
2.5
3.1
1.9
2.4
1.8
1.2
0.6
0.5
-0.6
-0.6
0.3
0.2
0.7
0.0
1.4
0.3
1.5
0.8
0.5
9 LOC4326797 GTP-binding protein SAR1A 4326797 Os01g0338000 5.2 3.8
6.5
1.1
0.3
6.4
2.1
2.4
1.7
4.1
2.2
4.1
0.7
2.5
2.2
3.0
2.4
1.0
1.0
2.6
1.3
3.0
2.6
0.1
-0.4
2.7
2.2
2.1
2.0
1.5
1.4
3.0
3.0
4.5
2.1
3.3
1.6
10 LOC4342827 protein transport protein SEC13 homolog B 4342827 5.1 3.9
6.3
1.9
1.5
4.6
2.9















11 LOC4332055 26S proteasome non-ATPase regulatory subunit 13 homolog B 4332055 Os03g0214600 5.0 5.0
5.0
2.3
1.8
2.6
2.4
2.2
1.6
4.6
3.7
2.7
1.3
4.7
3.2
5.8
3.4
-0.1
-0.2
2.5
0.6
1.9
0.5
-1.0
-1.7
2.4
1.8
2.2
2.0
0.9
0.7
3.3
1.6
3.3
12 LOC4338222 protein kish 4338222 Os05g0251500 5.0 6.1
3.9
1.4
3.0
2.5
5.2
3.7
2.2
-0.1
2.5
0.2
0.6
0.3
2.9
-1.0
2.7
-0.3
1.4
-0.2
1.7
1.6
0.5
0.2
1.9
0.4
2.5
1.7
2.5
13 LOC4325192 autophagy-related protein 18d 4325192 Os01g0168500 4.9 3.8
6.0
-0.4
1.9
1.1
-0.2
1.1
-0.1
-0.4
-0.9
2.5
2.5
2.8
1.8
0.3
-0.8
1.3
-0.1
0.1
3.0
2.3
0.7
0.3
2.0
1.6
1.1
-0.8
-0.3
14 LOC4327710 uncharacterized LOC4327710 4327710 Os01g0254200 4.9 4.5
5.3
1.1
2.5















15 LOC4338816 PHD finger protein ALFIN-LIKE 5-like 4338816 OSNPB_050419100 4.9 6.7
3.0
2.9
1.9
1.2
1.2
2.8
2.5
4.6
3.4
5.7
4.7
5.2
4.5
4.4
4.4
1.0
0.6
3.5
1.7
2.5
2.1
1.8
0.6
2.6
2.1
2.1
0.9
2.3
1.8
3.3
3.2
2.7
-0.2
3.9
1.8
16 LOC4330673 pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial-like 4330673 OSNPB_020739600 4.9 4.4
5.3
0.5
0.2
-0.0
-0.1
1.8
-2.3
1.9
-0.6
1.8
1.6
1.3
0.2
1.5
1.2
0.6
0.3
1.3
-0.1
-0.0
-1.1
-0.1
-0.8
0.5
0.5
0.4
-0.1
1.7
-0.1
1.2
0.9
1.7
0.3
2.7
1.7
17 LOC4350403 protein transport protein SEC23 4350403 Os11g0433500 4.9 2.5
7.2
1.0
4.9
1.2
0.5
3.5
1.4
1.5
1.5
1.5
0.6
2.3
1.1
0.8
0.6
1.0
-1.0
0.6
-0.3
0.0
-0.8
0.0
-0.1
-0.6
-0.8
1.2
1.0
2.5
1.3
3.4
18 LOC4325047 protein YIPF6 homolog 4325047 Os01g0867700 4.8 4.0
5.7
1.8
0.1
3.8
2.2
1.0
0.8
3.6
3.6
4.2
3.1
0.9
0.4
1.3
0.9
0.8
0.5
-0.3
-0.5
1.0
0.6
1.2
-0.1
1.6
1.2
0.4
0.0
1.3
0.1
2.1
1.1
2.5
19 LOC4333265 probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 4333265 OSNPB_030565100 4.8 5.0
4.6
1.2
1.8
0.7
2.1
2.0
0.7
0.1
-0.7
-1.5
-0.4
-1.0
1.2
-0.7
2.8
0.9
0.8
-1.6
-0.2
1.1
0.5
1.5
2.0
2.1
20 LOC4348493 ras-related protein Rab11D 4348493 Os10g0377400 4.8 4.2
5.4
2.8
3.0
3.4
1.7
4.5
2.8
2.8
1.4
0.1
-1.2
0.3
-0.0
0.1
0.0
2.3
2.3
1.6
0.6
-0.8
-1.4
1.0
-0.4
1.7
-0.6
3.3
2.1
2.4
1.0
3.4
1.3
3.5
0.7
21 LOC4329484 probable magnesium transporter NIPA8 4329484 Os02g0518100 4.8 4.6
4.9
0.8
4.2
1.1
3.4
1.1
0.4
-0.4
1.1
1.1
0.3
0.2
0.4
0.9
-1.0
1.0
0.3
1.6
0.8
1.0
1.6
22 LOC4327451 ubiquitin-conjugating enzyme E2-17 kDa 4327451 Os01g0819500 4.8 6.9

1.3
1.0
2.9
2.5
3.1
2.3
3.8
3.3
7.1
5.7
3.9
3.7
5.1
3.6
1.4
1.3
1.8
1.5
1.3
1.0
1.0
0.7
2.9
1.9
2.0
1.8
2.8
2.5
3.4
2.9
1.2
0.7
2.9
1.5
23 LOC4348925 uncharacterized LOC4348925 4348925 Os10g0481400 4.7 3.1
6.4
0.3
1.7
1.5
0.9
-0.4
2.4
-0.4
1.5
-0.4
0.3
0.2
1.6
-0.2
1.2
1.2
-0.2
0.5
3.2
0.3
1.6
24 LOC4337877 Golgi apparatus membrane protein-like protein ECHIDNA 4337877 Os05g0159100 4.7 5.5
3.9
1.6
1.5
5.5
1.6
2.9
3.1
2.0
2.1
2.5
-0.1
1.0
1.5
-1.2
2.1
1.4
1.6
0.9
1.6
1.0
3.0
2.4
2.0
25 LOC4330181 GTP-binding protein YPTM2 4330181 Os02g0653800 4.7 4.6
4.8
1.3
0.8
3.2
2.5
3.0
1.6
5.5
5.0
3.3
2.3
5.2
4.6
7.3
6.4
1.0
0.7
3.6
2.0
1.6
0.4
0.9
0.5
3.8
2.9
2.3
1.7
3.9
3.3
4.5
3.0
2.6
2.5
4.7
2.4
26 LOC4346428 CCR4-NOT transcription complex subunit 10 4346428 Os09g0123100 4.7 5.6
3.8
1.0
2.1
3.5
1.9
-0.1
1.7
1.5
1.9
1.4
-0.3
-1.1
1.0
0.7
-1.3
1.4
-0.3
-1.3
-1.9
1.7
1.4
0.3
-0.1
0.8
27 LOC4334331 AP-1 complex subunit sigma-1 4334331 Os03g0783700 4.7 5.8
3.6
1.7
2.7
2.1
1.2
3.9
2.1
6.7
0.9
1.2
1.0
3.1
1.3
0.5
-0.6
1.5
0.8
-0.3
2.5
2.5
3.4
1.0
1.7
1.0
3.4
3.5
2.8
28 LOC4344971 26S proteasome non-ATPase regulatory subunit 1 homolog A 4344971 Os08g0224700 4.7 6.1
3.2
1.3
0.7
2.1
1.8
0.7
0.1
1.1
0.1
0.9
0.7
1.9
1.9
2.0
2.0
0.1
0.0
-0.4
-0.6
0.4
0.1
-0.8
-1.3
1.2
0.3
0.9
-0.2
1.0
0.1
1.6
1.4
1.0
0.4
0.9
0.8
29 LOC4347735 probable 26S proteasome non-ATPase regulatory subunit 3 4347735 Os09g0541900 4.7 4.0
5.3
2.1
0.6
3.5
2.6
2.3
0.5
4.1
3.8
1.7
1.7
2.6
2.5
2.7
2.6
0.3
0.2
2.3
1.0
-0.1
2.2
1.6
0.7
-0.2
1.9
1.7
3.0
2.2
2.0
1.9
3.0
2.0
30 LOC4325777 ATP-citrate synthase beta chain protein 1-like 4325777 OSNPB_010300200 4.6 5.4
3.9
0.8
3.9
-1.4
-1.4
2.0
1.3
2.2
1.7
0.8
0.7
2.3
1.7
0.5
0.2
2.5
0.4
2.4
2.3
-0.1
-1.0
1.0
0.7
0.5
0.2
1.4
-0.4
1.0
1.1
3.6
31 LOC4331050 26S proteasome regulatory subunit 6A homolog 4331050 OSNPB_020803700 4.6 7.3
1.9
2.1
1.6
3.6
2.7
1.5
1.3
3.6
1.3
5.7
-0.4
3.1
2.6
3.9
3.4
-0.3
-0.6
2.9
-0.0
-0.9
2.9
1.6
2.3
1.7
0.1
-0.7
1.8
0.6
1.1
-0.2
2.1
0.7
32 LOC4330363 probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase 4330363 Os02g0688500 4.6 3.4
5.8
1.3
4.1
-1.2
0.6
1.2
2.1
1.4
-0.1
2.9
0.6
-0.4
0.5
0.4
-0.1
1.4
0.7
0.4
-0.3
1.6
0.9
33 LOC9271232 heat shock factor-binding protein 9271232 Os09g0375100 4.6 6.3

3.4
1.7



0.0
-2.1
1.0
-0.7
0.3
0.2
-1.6
-0.2
0.4
-0.3
-0.4
-0.9
-0.2
-0.4
-1.4
34 LOC4328228 protein transport protein SEC13 homolog B 4328228 Os02g0135800 4.6 4.6
4.5
0.5
1.8
2.4
2.1
3.5
3.0
3.3
2.5
3.1
2.3
4.6
3.5
-0.7
-0.7
3.0
1.4
1.7
0.7
-0.1
-0.7
2.1
1.8
0.9
0.4
3.1
2.8
4.5
2.1
3.7
35 LOC4346143 transmembrane emp24 domain-containing protein p24beta2 4346143 Os08g0532900 4.6 5.5
3.6
2.9
1.5
3.1
2.2
2.8
3.9
3.6
1.5
0.5
1.1
0.7
-0.1
-0.7
-0.5
0.8
-0.8



2.8
1.5
3.4
36 LOC4352423 conserved oligomeric Golgi complex subunit 8 4352423 Os12g0538300 4.5 3.6
5.5
3.3
4.3
0.7
2.0
2.0
0.8
0.3
1.1
0.2
-0.0
-0.4
2.5
1.2
0.1
0.7
-0.2
1.7
2.5
5.0
2.1
37 LOC4345680 Golgi SNAP receptor complex member 1-1 4345680 Os08g0440000 4.5 5.7
3.4
1.5
0.9
3.7
2.7
-0.9
2.5
6.1
2.3
1.4
2.1
0.7
1.0
0.5
0.4
1.5
0.7
0.4
0.2
-0.0
-0.4
0.6
-0.1
3.2
0.7
0.2
-0.1
1.4
-0.0
38 LOC4339088 PRA1 family protein B2 4339088 Os05g0474400 4.5 3.4
5.7
1.6
1.8
2.1
0.7
6.1
2.8
2.9
2.6
1.3
1.2
1.7
1.4
1.5
0.7
1.2
0.8
1.8
1.3
-0.2
-0.3
1.6
1.6
1.2
1.0
1.6
1.3
2.2
0.8
1.7
0.5
4.8
2.5
39 LOC4329636 transmembrane 9 superfamily member 1 4329636 Os02g0552000 4.5 2.9
6.1
2.7
1.6
4.7
4.0
-0.9
1.4
3.1
0.5
-0.7
1.2
-0.4
0.3
-0.0
1.5
1.4
1.6
1.3
0.3
-0.9
1.4
-0.3
0.4
-0.3
2.8
2.5
3.0
2.4
3.9
2.3
3.9
2.9
40 LOC9266581 WD repeat-containing protein 26 homolog 9266581 Os02g0294600 4.5 4.9
4.1
0.5
1.4
0.0
3.3
1.9
2.1
1.7
2.1
1.6
0.5
0.3
2.2
0.1
-0.3
-0.8
1.2
0.7
1.5
1.3
0.2
-0.2
1.9
1.6
1.0
0.9
1.1
-0.4
0.2
0.1
41 LOC4335701 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1-like 4335701 OSNPB_040397000 4.5 6.5
2.5
2.2
2.2
0.5
0.3
2.1
1.4
1.7
0.5
0.7
0.6
-0.0
1.5
2.1
-0.8
1.1
0.7
1.2
0.8
0.3
-0.7
5.1
3.4
2.5
42 LOC4339020 coatomer subunit zeta-1-like 4339020 OSNPB_050461000 4.4 4.6
4.2
2.3
1.5
4.2
3.2
1.1
-0.5
2.5
-1.1
1.7
0.4
1.3
1.2
2.8
1.8
1.7
1.3
3.4
1.7
2.8
1.2
0.9
0.3
2.1
1.5
1.0
0.9
2.2
1.6
4.3
3.4
3.3
0.6
2.5
0.5
43 LOC4333749 uncharacterized protein C6C3.02c 4333749 Os03g0685500 4.4 4.8
4.1
1.2
0.8
0.2
0.3
0.0
3.0
2.8
4.4
2.1
-0.5
-0.6
0.4
-0.0
1.7
1.3
0.6
0.9
0.9
0.5
0.4
2.5
-0.6
2.8
44 LOC4341448 26S proteasome regulatory subunit 8 homolog A 4341448 Os06g0600100 4.4 4.5
4.4
1.4
1.2
3.0
1.5
1.9
1.8
3.3
3.2
1.4
0.5
4.1
3.0
3.6
3.5
-0.4
-0.5
1.9
1.6
-0.1
-0.7
-1.5
-2.3
2.1
1.3
1.5
1.0
1.2
0.1
4.4
1.0
4.3
45 LOC4342669 DEAD-box ATP-dependent RNA helicase 52B-like 4342669 OSNPB_070202100 4.4 3.7
5.2
2.4
1.4
2.4
-0.1
3.8
1.5
1.7
1.5
0.0
-0.1
2.0
1.6
2.7
2.1
0.3
0.2
-0.2
-3.5
-0.2
-1.1
1.7
-2.2
0.6
0.5
-0.1
-0.2
0.4
0.4
1.8
1.7
2.9
1.4
3.2
1.8
46 LOC4343960 UMP-CMP kinase 3-like 4343960 OSNPB_070624700 4.4 4.7
4.2
1.0
0.6
5.0
3.5
0.8
0.3
1.3
0.7
1.8
-0.3
0.7
0.3
1.9
1.7
2.2
1.6
1.7
-1.1
2.5
-0.7
0.4
0.1
2.0
0.6
0.8
0.3
2.1
1.7
1.9
2.5
4.1
47 LOC4339566 dynamin-related protein 5A 4339566 Os05g0556100 4.4 4.7
4.1
2.0
1.8
6.0
5.6
1.6
0.9
3.9
3.2
3.9
3.7
2.6
2.1
3.1
2.9
1.3
1.0
3.2
2.6
2.7
2.1
-0.2
-0.3
1.9
1.7
1.0
0.8
3.1
2.2
3.0
2.7
4.8
3.0
3.8
2.7
48 LOC4328286 eukaryotic initiation factor 4A-3-like 4328286 OSNPB_020146600 4.4 4.5
4.3
0.6
0.5
2.9
0.4
1.6
1.1
2.6
1.9
2.9
1.1
2.4
2.1
2.6
2.4
0.6
0.4
1.4
0.4
1.7
0.7
0.7
0.3
1.5
1.4
1.4
1.0
0.7
0.3
2.7
2.6
1.3
1.0
3.6
3.0
49 LOC4330861 proteasome subunit beta type-6 4330861 Os02g0770000 4.3 5.1
3.5
2.7
1.6
1.6
1.0
3.9
4.9
0.9
4.6
3.4
3.0
2.5
-0.2
-0.7
1.3
1.3
-1.4
2.4
1.8
1.8
4.9
2.5
2.5
50 LOC4344525 probable calcium-binding protein CML7 4344525 OSNPB_080117400 4.3 3.7
4.9
1.8
2.6
0.9
4.0
2.0
0.1
-0.3
0.8
-0.4
1.0
0.4
2.0
0.5
2.6
2.0
0.4
-0.4
1.9
1.5
1.8
0.1
2.0
1.6
3.8
2.7
4.7
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