Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4344854   phosphoribosylamine--glycine ligase 
 osa-r.5   4344854   phosphoribosylamine--glycine ligase 
 osa-m.8   4344854   phosphoribosylamine--glycine ligase 
 osa-u.4   4351721   phosphoribosylamine--glycine ligase 
 ath-u.4   PUR2   Glycinamide ribonucleotide (GAR) synthetase 
 gma-u.4   PURD   phosphoribosylamine--glycine ligase 
 sly-u.4   101265372   phosphoribosylamine--glycine ligase 
 ppo-u.4   18098330   phosphoribosylamine--glycine ligase 
 ppo-u.4   112327301   phosphoribosylamine--glycine ligase-like 

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Top 50 coexpressed genes to 4344854 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa1230   Biosynthesis of amino acids  12 220 13.58
 osa230   Purine metabolism  7 89 9.15
 osa250   Alanine, aspartate and glutamate metabolism  5 50 7.18
 osa3010   Ribosome  5 336 3.16
 osa300   Lysine biosynthesis  4 13 7.91

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osa:LOC4344854 (phosphoribosylamine--glycine ligase) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4344854
osa-r.5
for
4344854
osa-m.8
for
4344854
osa-u.4
for
4351721
ath-u.4
for
PUR2
gma-u.4
for
PURD
sly-u.4
for
101265372
ppo-u.4
for
18098330
ppo-u.4
for
112327301
1 LOC4344931 bifunctional purine biosynthesis protein PurH 4344931 Os08g0206600 7.4 5.4
 9.4
 0.1
 6.2
 6.4
4.9
 6.6
 3.1
 2.4
2 LOC4324899 probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 4324899 Os01g0888500 7.1 7.0
 7.1
 0.3
-0.7
 4.4
 7.6
6.1
 4.5
 3.2
1.3
 3.2
0.9
3 LOC4332596 argininosuccinate lyase, chloroplastic 4332596 Os03g0305500 6.6 7.8
 5.5
 1.2
 3.7
 3.9
2.0
 3.1
 1.2
 0.6
4 LOC4332563 probable LL-diaminopimelate aminotransferase, chloroplastic 4332563 OSNPB_030299900 6.0 7.3
 4.8
 0.8
 2.9
0.3
 4.0
3.8
 4.2
-0.4
 2.6
-1.0
 3.0
-1.1
5 LOC4352058 serine hydroxymethyltransferase 4 4352058 Os12g0409000 5.4 4.6
 6.1
 1.1
-0.5
 1.6
1.1
 1.4
0.0
 0.7
-0.1
 0.9
0.5
 0.6
0.5
6 LOC4330585 tRNA (guanine(9)-N1)-methyltransferase 4330585 Os02g0725600 5.2 4.7
 5.7
 0.2
 0.2
 1.9
1.9
 2.9
 2.1
1.0
 1.7
0.6
7 LOC4344241 60S ribosome subunit biogenesis protein NIP7 homolog 4344241 Os07g0670600 5.2 4.3
 6.1
 -0.2
 3.5
 3.2
2.4
 3.1
 0.9
 0.2
8 LOC4324030 uncharacterized LOC4324030 4324030 Os01g0511200 5.2 4.8
 5.5
 0.2
 3.2
2.3
 2.7
0.6
 3.1
 4.6
 3.7
9 LOC4330066 pentatricopeptide repeat-containing protein At4g36680, mitochondrial 4330066 Os02g0633200 5.0 4.8
 5.3
 1.3
0.5
 2.6
2.4
 5.1
4.1
 3.3
3.1
 3.8
2.8
 3.3
2.2
10 LOC4325333 probable U3 small nucleolar RNA-associated protein 7 4325333 Os01g0183100 5.0 4.4
 5.5
 0.9
 3.0
 4.2
2.9
 3.6
 1.6
0.6
 1.0
0.3
11 LOC4342620 bifunctional phosphatase IMPL2, chloroplastic 4342620 Os07g0191000 5.0 4.5
 5.4
 1.1
 2.7
 -0.6
 1.8
 1.6
 1.0
12 LOC4327989 uncharacterized LOC4327989 4327989 Os02g0102400 4.9 5.3
 4.5
 0.3
 3.9
 5.0
3.3
 4.7
 3.0
 2.5
13 LOC4348843 54S ribosomal protein L19, mitochondrial 4348843 Os10g0466200 4.9 4.6
 5.2
 0.1
 1.2
 0.3
0.2
 1.7
 1.7
 1.7
14 LOC4342672 uncharacterized LOC4342672 4342672 Os07g0202900 4.9 4.7
 5.0
 -0.2
 2.7
 5.0
3.5
 3.3
 1.6
 1.6
15 LOC4331792 adenylosuccinate synthetase 1, chloroplastic-like 4331792 OSNPB_030174500 4.8 4.1
 5.5
 1.7
1.1
 7.1
 4.2
3.9
 6.9
4.2
 3.2
 2.8
16 LOC4343836 U3 small nucleolar RNA-associated protein 18 homolog 4343836 Os07g0603200 4.8 4.5
 5.0
 0.4
 2.4
 3.4
3.1
 3.6
 2.3
 1.9
17 LOC4343020 uncharacterized LOC4343020 4343020 Os07g0415200 4.8 3.5
 6.1
 0.8
 2.3
 5.9
1.4
 1.4
 3.6
 3.8
18 LOC4329234 probable diaminopimelate decarboxylase, chloroplastic 4329234 OSNPB_020440000 4.7 4.9
 4.5
 0.7
 6.4
3.7
 3.1
2.4
 4.6
 3.2
3.0
 2.9
2.7
19 LOC4343842 pentatricopeptide repeat-containing protein PNM1, mitochondrial 4343842 Os07g0603900 4.7 3.6
 5.8
 1.0
 2.5
 3.8
3.1
 4.4
 4.6
 3.2
20 LOC4334671 phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic 4334671 Os03g0831500 4.7 4.8
 4.5
 0.4
 6.6
 5.9
4.2
 5.0
 2.6
1.3
 1.8
1.0
21 LOC4339677 ketol-acid reductoisomerase, chloroplastic-like 4339677 OSNPB_050573700 4.6 5.2
 4.0
 -0.0
-0.3
 4.2
 7.5
6.0
 2.2
1.7
 2.3
0.2
 1.8
0.2
22 LOC4338152 eukaryotic translation initiation factor 3 subunit L 4338152 Os05g0227700 4.6 3.7
 5.5
 0.2
-0.6
 3.2
2.9
 4.3
3.8
 3.5
 2.1
0.4
 1.8
0.3
23 LOC4347318 phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic 4347318 Os09g0467100 4.6 3.3
 5.9
 1.8
 4.8
 8.6
7.4
 3.4
 2.5
 1.7
24 LOC4346318 dihydroxy-acid dehydratase, chloroplastic 4346318 Os08g0559600 4.5 4.7
 4.4
 0.5
 3.7
 6.3
 2.5
2.1
 1.9
1.9
 2.0
1.9
25 LOC9271204 zinc finger CCCH domain-containing protein 24 9271204 Os04g0105000 4.5 4.3
 4.8
 0.4
 0.6
 2.2
0.5
 1.5
 2.1
 1.4
26 LOC4334188 aspartate-semialdehyde dehydrogenase 4334188 Os03g0760700 4.5 4.4
 4.6
 2.4
 3.5
 4.2
2.4
 4.3
 1.7
 1.2
27 LOC4346920 leucine--tRNA ligase, cytoplasmic 4346920 Os09g0378300 4.5 3.4
 5.5
 0.5
0.4
 2.1
 3.7
2.9
 4.4
 0.7
0.4
 0.4
0.4
28 LOC4346941 DEAD-box ATP-dependent RNA helicase 22-like 4346941 OSNPB_090383400 4.4 4.6
 4.2
 1.3
 4.7
 3.1
 5.4
 4.7
 4.2
29 LOC4336463 uncharacterized LOC4336463 4336463 Os04g0527800 4.4 3.3
 5.5
 0.1
 1.4
 5.1
3.7
 4.7
 3.2
 3.1
30 LOC4337293 U3 small nucleolar ribonucleoprotein protein IMP3 4337293 Os04g0662100 4.4 4.4
 4.5
 0.1
 1.3
 2.1
0.9
 1.7
 2.3
1.4
 2.1
0.7
31 LOC4324282 histidinol dehydrogenase, chloroplastic-like 4324282 OSNPB_010232700 4.4 4.0
 4.8
 0.6
 4.6
 1.6
0.6
 4.0
 3.5
0.2
 3.2
-0.1
32 LOC4336098 uncharacterized LOC4336098 4336098 Os04g0466700 4.4 4.0
 4.8
 -0.2
 1.2
 0.8
0.0
 1.9
 1.0
0.2
 0.9
0.2
33 LOC4330474 carbamoyl-phosphate synthase small chain, chloroplastic-like 4330474 OSNPB_020708100 4.4 4.5
 4.3
 -0.2
 4.6
 3.8
2.9
 4.1
 2.9
2.0
 2.4
2.0
34 LOC4338571 40S ribosomal protein S4-like 4338571 Os05g0368300 4.4 4.3
 4.5
 0.3
0.1
 2.2
1.7
 5.3
5.1
 5.3
5.0
 3.1
2.3
 2.5
1.9
35 LOC4332531 DNA-directed RNA polymerases I and III subunit rpac1 4332531 Os03g0295400 4.4 3.4
 5.4
 0.0
 2.0
1.5
 3.0
1.9
 3.6
 3.0
 2.1
36 LOC4332296 imidazole glycerol phosphate synthase hisHF, chloroplastic 4332296 Os03g0256400 4.4 4.0
 4.8
 1.4
 3.5
 4.7
4.0
 4.2
 2.0
2.0
 1.7
1.6
37 LOC4328064 RNA-binding protein NOB1 4328064 Os02g0114700 4.4 5.3
 3.5
 -0.4
 2.0
 4.2
3.3
 0.9
 2.1
 1.4
38 LOC4329224 probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4329224 OSNPB_020436400 4.4 5.0
 3.7
 1.2
0.4
 1.2
0.6
 4.8
3.0
 5.3
 1.2
 0.8
39 LOC4332642 adenylosuccinate lyase 4332642 Os03g0313600 4.3 5.3
 3.4
 -0.2
 3.0
1.9
 6.6
4.9
 5.9
 2.0
 1.7
40 LOC4347950 notchless protein homolog 4347950 Os10g0104500 4.3 3.2
 5.4
 1.3
-1.0
 3.0
 3.0
2.3
 4.9
 3.9
 3.3
41 LOC4352669 cytoplasmic tRNA 2-thiolation protein 2-like 4352669 OSNPB_120588900 4.3 4.1
 4.5
 0.6
 0.3
 0.3
 2.9
 0.9
 0.2
42 LOC4340255 mitochondrial outer membrane import complex protein METAXIN 4340255 Os06g0168150 4.3 3.8
 4.7
 0.4
 0.2
 3.0
3.0
 2.5
 3.0
 2.2
43 LOC4339570 T-complex protein 1 subunit beta 4339570 Os05g0556700 4.2 4.5
 3.9
 0.4
-0.1
 1.4
 5.9
5.7
 4.1
 4.5
3.4
 3.9
3.2
44 LOC4327851 putative exosome complex component rrp40 4327851 Os01g0661400 4.2 3.5
 4.9
 -0.3
-0.6
 3.0
2.6
 3.1
0.7
 2.2
 1.0
 0.6
45 LOC4352048 40S ribosomal protein S3a-like 4352048 Os12g0406200 4.2 4.4
 4.0
 0.7
0.4
 3.0
0.6
 6.6
5.1
 3.7
2.6
 2.2
2.1
 2.0
2.0
46 LOC4333283 polyadenylate-binding protein RBP45 4333283 Os03g0569900 4.2 4.1
 4.3
 0.3
0.3
 3.0
1.6
 1.7
1.5
 1.8
1.0
 0.2
0.1
 0.5
0.0
47 LOC4351847 argininosuccinate synthase, chloroplastic 4351847 Os12g0235800 4.2 3.1
 5.3
 0.9
 4.0
 5.6
4.9
 6.2
 4.3
3.6
 3.5
3.3
48 LOC4336329 2,3-dimethylmalate lyase 4336329 Os04g0504600 4.2 3.7
 4.6
 1.2
0.9
 1.9
 1.1
1.1
 2.5
 1.7
 1.3
49 LOC4345281 GMP synthase [glutamine-hydrolyzing] 4345281 Os08g0326600 4.2 4.5
 3.9
 0.2
 3.4
 3.4
2.9
 3.8
 2.9
 2.5
50 LOC4337830 histidine--tRNA ligase, cytoplasmic-like 4337830 OSNPB_050150900 4.2 3.4
 5.0
 -0.0
 1.3
 3.9
3.1
 5.5
 2.4
 2.2
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