Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4345225   formamidopyrimidine-DNA glycosylase 
 osa-r.5   4345225   formamidopyrimidine-DNA glycosylase 
 osa-m.8   4345225   formamidopyrimidine-DNA glycosylase 
 osa-u.4   4341640   formamidopyrimidine-DNA glycosylase 
 ath-u.4   MMH-1   MUTM homolog-1 
 gma-u.4   100806161   formamidopyrimidine-DNA glycosylase 
 sly-u.4   101258844   formamidopyrimidine-DNA glycosylase 
 ppo-u.4   18096694   formamidopyrimidine-DNA glycosylase 
 mtr-u.4   11435290   formamidopyrimidine-DNA glycosylase 

close


Top 50 coexpressed genes to 4345225 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa30   Pentose phosphate pathway  1 57 -
 osa52   Galactose metabolism  1 59 -
 osa51   Fructose and mannose metabolism  1 64 -
 osa10   Glycolysis / Gluconeogenesis  1 143 -
 osa1240   Biosynthesis of cofactors  2 248 -

close


osa:LOC4345225 (formamidopyrimidine-DNA glycosylase) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4345225
osa-r.5
for
4345225
osa-m.8
for
4345225
osa-u.4
for
4341640
ath-u.4
for
MMH-1
gma-u.4
for
100806161
sly-u.4
for
101258844
ppo-u.4
for
18096694
mtr-u.4
for
11435290
1 LOC4337316 cell division protein FtsZ homolog 1, chloroplastic 4337316 Os04g0665400 3.8 3.1
 4.5
 1.0
 0.7
 0.4
0.3
 1.6
1.0
 0.5
 2.1
0.7
2 LOC9267860 uncharacterized LOC9267860 9267860 Os01g0590700 3.8 3.3
 4.2





3 LOC4334546 probable DNA gyrase subunit A, chloroplastic/mitochondrial 4334546 OSNPB_030812000 3.6 3.0
 4.2
 0.4
 1.7
 1.2
 2.6
 0.9
 3.6
4 LOC4337213 crossover junction endonuclease EME1-like 4337213 OSNPB_040648700 3.6 3.0
 4.2
 0.9
 1.7
0.9
 0.5
-0.4
 1.1
 0.2
 2.7
5 LOC4325601 protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic-like 4325601 Os01g0769900 3.5 3.1
 3.9
 1.7
 1.5
 1.3
 0.7
 2.3
 0.5
6 LOC4341990 protein PHOSPHATE STARVATION RESPONSE 3-like 4341990 Os06g0703900 3.4 3.0
 3.8
 1.6
-0.7
 0.4

0.7
0.3
7 LOC4341008 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic 4341008 Os06g0367100 3.4 2.8
 4.0
 0.1
 0.7
 0.5
 2.6
 1.0
 1.0
8 LOC4334299 uncharacterized LOC4334299 4334299 Os03g0778000 3.4 3.0
 3.8
 0.0




9 LOC4327229 protein DEK 4327229 Os01g0924900 3.3 4.0
 2.7
 1.1
 4.5
2.8
 1.4
1.3
 1.8
1.0
 1.9
1.3
 2.6
10 LOC4336345 DNA mismatch repair protein MSH1, mitochondrial 4336345 Os04g0507016 3.2 3.6
 2.8
 1.8
 3.4
 2.0
1.7
 2.8
 1.9
 0.6
11 LOC4346609 dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase 4346609 Os09g0280300 3.2 2.9
 3.4
 0.4
 0.0
 -0.6
 1.5
 0.0
 2.3
12 LOC4348184 chloride conductance regulatory protein ICln 4348184 Os10g0170000 3.2 3.4
 2.9
 1.5
1.4
 2.1
 2.2
2.2
 0.6
 0.2
-0.0
 2.5
13 LOC4338660 UDP-sulfoquinovose synthase, chloroplastic 4338660 Os05g0387200 3.2 2.6
 3.8
 -0.4
 -0.9
 0.9
-0.3
 1.5
 0.1
 -1.2
14 LOC4325731 probable chromatin-remodeling complex ATPase chain 4325731 OSNPB_010367900 3.2 3.4
 2.9
 1.7
0.8
 4.6
1.8
 1.7
1.5
 2.9
1.2
 3.1
2.7
 1.9
1.1
15 LOC4329188 nucleoplasmin-2-like 4329188 3.2 3.8
 2.5
 0.9
 0.3
 0.1
-0.6
 1.8
 0.8
 -0.0
16 LOC4338271 DNA mismatch repair protein MSH2 4338271 Os05g0274200 3.1 1.7
 4.6
 1.4
 3.0
 0.8
 1.1
 0.6
 1.8
17 LOC4343276 ATP-dependent DNA helicase SRS2-like protein At4g25120 4343276 Os07g0492100 3.1 4.4
 1.8
 1.6
 3.6
 -1.2
 2.3
2.0
18 LOC9272594 guanine nucleotide-binding protein alpha-1 subunit 9272594 Os05g0341300 3.0 2.3
 3.8





19 LOC4325215 uncharacterized LOC4325215 4325215 Os01g0148400 3.0 0.5
 5.5
 0.4




20 LOC4331292 phosphatidylserine decarboxylase proenzyme 1, mitochondrial-like 4331292 OSNPB_030101900 3.0 2.5
 3.5
 2.0
 3.3
 1.7
 1.1
 2.0
 1.2
21 LOC4326401 probable dual-specificity RNA methyltransferase RlmN 4326401 Os01g0973400 3.0 2.5
 3.4
 0.6
 0.4
 1.8
1.0
 -1.0
 1.0
 0.4
22 LOC4332866 probable diphthine methyl ester synthase 4332866 Os03g0355800 3.0 3.1
 2.8
 -0.3
 0.3
 1.2
-0.1
 -1.1
 0.2
 1.2
23 LOC4337146 prostatic spermine-binding protein 4337146 Os04g0636800 3.0 3.4
 2.5
 1.0




24 LOC4329646 RNA polymerase II transcriptional coactivator KIWI 4329646 Os02g0553600 3.0 3.0
 2.9
 1.7
 2.5
0.8
 2.0
1.2
 1.6
 0.9
 2.3
25 LOC4343013 poly [ADP-ribose] polymerase 1-like 4343013 OSNPB_070413700 2.9 2.5
 3.4
 1.9
 2.4
 2.5
0.3
 1.8
 1.7
 0.5
26 LOC4326620 chitinase domain-containing protein 1 4326620 Os01g0619800 2.9 2.7
 3.2
 0.1
 0.4
 3.2
 1.7
 -0.2
 1.3
27 LOC4345071 aspartate carbamoyltransferase, chloroplastic-like 4345071 OSNPB_080248800 2.9 2.8
 3.0
 -0.1
 1.5
 1.7
1.4
 2.1
 0.7
 2.0
-0.4
28 LOC9269322 O-fucosyltransferase 6 9269322 Os09g0548100 2.9 4.0
1.6
0.9
 1.2
0.8
 0.5
0.0
 0.9
-0.1
 0.5
0.5
 0.6
-0.6
29 LOC4330356 UPF0160 protein C694.04c 4330356 Os02g0686600 2.9 3.5
 2.3
 1.1
 1.2
0.1
 2.4
2.3
 1.2
 -0.7
 2.2
30 LOC4344464 chromatin assembly factor 1 subunit FAS2 homolog 4344464 OSNPB_080108200 2.9 3.1
 2.7
 0.6
 1.8
 1.5
0.2
 3.4
3.1
31 LOC4345835 uncharacterized LOC4345835 4345835 Os08g0477800 2.9 2.7
 3.0
 3.2
2.4
1.1
 1.8
 2.5
 2.7
32 LOC4340927 uncharacterized LOC4340927 4340927 Os06g0332600 2.9 1.2
 4.5
 0.9
-0.4




33 LOC4327826 WD-40 repeat-containing protein MSI4 4327826 Os01g0710000 2.9 2.2
 3.6
 2.4
 1.6
-0.0
 3.9
3.7
 2.8
0.8
 1.0
0.8
 4.3
3.5
34 LOC4336998 probable LRR receptor-like serine/threonine-protein kinase At1g56130 4336998 Os04g0616400 2.8 3.4
 2.2
 1.9
1.3
 2.3
0.9
 0.3
0.0
 0.4
 0.5
-1.1
 1.0
-0.1
35 LOC4329080 sirohydrochlorin ferrochelatase, chloroplastic 4329080 Os02g0296800 2.8 2.1
 3.6
 0.8
 -1.1
 2.6
 -1.7
 0.2
 0.9
36 LOC4332547 malonyl CoA-acyl carrier protein transacylase 4332547 Os03g0297400 2.8 1.8
 3.8
 1.2
 -0.3
 0.7
-0.1
 0.9
 0.4
 0.2
37 LOC4332038 SNAP25 homologous protein SNAP33 4332038 Os03g0212400 2.8 2.7
 2.9
 -0.4




38 LOC4342196 uncharacterized LOC4342196 4342196 Os07g0106000 2.8 2.3
 3.3
 0.4
0.3
 0.8
-0.7
 0.7
-0.0
 -1.7
-2.0
 0.2
 -2.2
39 LOC4329684 putative 12-oxophytodienoate reductase 8 4329684 OSNPB_020559400 2.8 1.9
 3.6





40 LOC4324297 glycine-rich RNA-binding protein 2, mitochondrial 4324297 Os01g0974701 2.8 2.3
 3.3
 1.2
1.6
0.5
 0.5
1.9
41 LOC4350378 protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like 4350378 Os11g0425300 2.8 2.6
 2.9
 0.4
 1.5
 1.2
0.5
 3.9
 0.7
 1.7
42 LOC4337151 uncharacterized LOC4337151 4337151 Os04g0637500 2.8 2.1
 3.5
 0.3




43 LOC4345311 L10-interacting MYB domain-containing protein 4345311 Os08g0338000 2.7 1.7
 3.8
 1.6
1.0


1.8
0.2
 1.0
0.7
44 LOC4325020 structural maintenance of chromosomes protein 2-1 4325020 Os01g0904400 2.7 2.4
 3.1
 0.9
 1.4
1.2
 0.4
-0.4
 2.7
 -0.2
-0.4
 2.3
45 LOC4343080 tryptophan decarboxylase 2-like 4343080 OSNPB_070437500 2.7 1.8
 3.6
 -0.0
 0.7
-0.4
 -0.7
 -0.3
 0.5
 0.6
-0.3
46 LOC4327196 ATP-dependent 6-phosphofructokinase 6 4327196 Os01g0738800 2.7 2.6
 2.9
 0.8
0.6
 -0.1
-0.1
 1.7
0.7
 -0.1
-1.8
 2.0
1.5
 1.7
0.7
47 LOC4352612 probable inactive purple acid phosphatase 1 4352612 Os12g0576600 2.7 2.5
 2.9
 1.4
0.6
 -0.9
-1.4
 0.0
-0.0
 0.2
-0.2
 0.9
0.4
 0.9
0.6
48 LOC4344413 uncharacterized LOC4344413 4344413 Os08g0100800 2.7 3.0
 2.4
 2.9
0.1
 0.8
0.0
 2.4
1.9
 0.6
-0.1
 1.4
0.7
 0.7
-1.0
49 LOC4340482 uncharacterized LOC4340482 4340482 Os06g0215300 2.7 1.5
 3.9
 1.2
0.6
 0.8
 0.0
-0.5
 0.9
-0.7
 1.1
 2.2
50 LOC4336659 putative tRNA pseudouridine synthase Pus10 4336659 Os04g0561700

1.7
 2.4
 2.9
 0.7
 1.5
 -0.4
The preparation time of this page was 3.1 [sec].