Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4345533   tRNA modification GTPase MnmE 
 osa-r.5   4345533   tRNA modification GTPase MnmE 
 osa-m.8   4345533   tRNA modification GTPase MnmE 
 ath-u.4   AT1G78010   tRNA modification GTPase 
 gma-u.4   100779193   tRNA modification GTPase MnmE 
 gma-u.4   100818096   tRNA modification GTPase MnmE 
 sly-u.4   101246529   tRNA modification GTPase MnmE 
 ppo-u.4   7495139   tRNA modification GTPase MnmE 
 mtr-u.4   25489409   tRNA modification GTPase MnmE 

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Top 50 coexpressed genes to 4345533 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa970   Aminoacyl-tRNA biosynthesis  8 70 11.74
 osa450   Selenocompound metabolism  1 19 -
 osa220   Arginine biosynthesis  1 36 -
 osa330   Arginine and proline metabolism  1 58 -
 osa480   Glutathione metabolism  1 114 -

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osa:LOC4345533 (tRNA modification GTPase MnmE) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4345533
osa-r.5
for
4345533
osa-m.8
for
4345533
ath-u.4
for
AT1G78010
gma-u.4
for
100779193
gma-u.4
for
100818096
sly-u.4
for
101246529
ppo-u.4
for
7495139
mtr-u.4
for
25489409
1 LOC4325344 DEAD-box ATP-dependent RNA helicase 39-like 4325344 OSNPB_010184500 6.0 6.0
 6.1
 3.0
 4.3
 3.1
 4.0
 4.5
 3.2
2 LOC4328072 uncharacterized LOC4328072 4328072 Os02g0115600 5.9 5.0
 6.8
 1.8
 1.2
 1.7
 2.7
 3.0
 1.0
3 LOC4331652 putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic 4331652 Os03g0152700 5.8 5.3
 6.2
 2.5
 4.9
 2.9
 4.4
 2.0
 2.4
4 LOC4334030 putative rRNA methyltransferase YlbH 4334030 Os03g0736400 5.6 4.5
 6.8
 1.6
 2.0
 2.3
 2.9
 2.5
 1.7
5 LOC4342497 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 4342497 OSNPB_070168000 5.6 7.1
 4.1
 4.9
 2.7
 2.6
 2.9
 4.4
3.5
 2.1
6 LOC4337150 DNA polymerase I A, chloroplastic-like 4337150 Os04g0637400 5.5 4.4
 6.7
 4.3
2.6
 2.1
1.0
 2.5
1.8
 2.7
 3.2
1.8
 1.5
1.5
7 LOC4334649 DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like 4334649 OSNPB_030827700 5.2 5.4
 4.9
 4.8
 2.6
2.0
 2.7
1.7
 3.7
 2.5
2.1
 2.8
8 LOC4324505 aspartate--tRNA ligase, chloroplastic/mitochondrial 4324505 Os01g0153400 5.1 4.4
 5.8
 4.6
 2.7
2.6
 3.9
3.8
 3.4
 5.0
2.5
 3.0
2.2
9 LOC4348255 uncharacterized LOC4348255 4348255 Os10g0198600 5.0 4.3
 5.6
 3.5
 2.4
2.3
 2.1
1.7
 2.4
 3.2
0.7
 1.5
10 WP1 white panicle1 4342467 Os07g0163500 5.0 4.8
 5.2
 4.6
 2.3
 2.3
 2.3
 4.5
 1.0
11 LOC4339764 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 4339764 Os05g0587200 5.0 4.6
 5.4
 3.6
 3.3
2.1
 2.3
2.3
 4.0
 2.5
 1.6
12 LOC4325010 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 4325010 Os01g0901900 4.9 5.7
 4.1
 3.6
 4.0
2.8
 4.8
3.6
 2.3
 3.6
 3.1
13 LOC9269203 tRNase Z TRZ2, chloroplastic 9269203 Os09g0482680 4.9 4.7
 5.1
 2.5
0.4
 2.6
1.8
 2.6
2.2
 2.4
0.5
 3.2
-0.1
 2.9
1.1
14 LOC4325601 protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic-like 4325601 Os01g0769900 4.8 4.6
 4.9
 2.9
 4.1
 3.1
 3.7
 2.7
 1.4
15 LOC4328994 proteinaceous RNase P 1, chloroplastic/mitochondrial 4328994 Os02g0273800 4.7 4.6
 4.9
0.5
 0.8
 1.8
 1.0
 2.6
16 LOC4339632 uncharacterized LOC4339632 4339632 Os05g0566300 4.7 4.7
 4.6
 3.7
 3.0
2.4
 2.9
2.0
 2.3
 0.9
 2.6
17 LOC4324676 uncharacterized LOC4324676 4324676 Os01g0558800 4.6 5.2
 4.1
 2.1
 1.7
1.1
 1.8
1.6
 4.3
 2.1
 1.7
18 LOC4350906 serine--tRNA ligase, chloroplastic/mitochondrial 4350906 Os11g0610900 4.6 4.1
 5.2
 2.9
 4.0
 4.0
 2.6
 2.2
 2.1
19 LOC4327311 uncharacterized RNA methyltransferase BH0687 4327311 Os01g0193600 4.6 5.5
 3.8
 3.5
 4.2
 3.5
 2.0
 4.2
 1.9
20 LOC4330908 isoleucine--tRNA ligase, chloroplastic/mitochondrial 4330908 Os02g0778200 4.6 4.2
 4.9
 1.4
 2.6
 1.3
 3.4
 3.2
 2.2
21 LOC4331719 glutathione reductase, chloroplastic 4331719 Os03g0163300 4.5 2.8
 6.3
 -0.1
 3.5
3.3
 2.7
1.5
 1.6
 3.5
 2.0
22 LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like 4326614 OSNPB_010618400 4.5 4.4
 4.7
 3.3
2.6
 2.5
1.9
 3.6
2.8
 1.6
 3.4
2.7
 3.9
1.5
23 LOC4341695 DNA-directed RNA polymerase 3B, chloroplastic 4341695 Os06g0652000 4.5 3.8
 5.2
 4.1
1.3
 2.2
2.0
 3.5
2.6
 2.2
1.4
 3.4
2.9
 2.6
2.2
24 LOC4337177 glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial-like 4337177 4.5 3.7
 5.2
 2.6
 2.7
 2.1
 3.1
 1.5
 2.1
25 LOC4342296 plastid division protein PDV2 4342296 Os07g0123300 4.5 5.5
 3.4
 1.0
 0.4
-0.4
 0.5
-0.3
 1.3
 1.8
1.0
 -0.1
-0.1
26 LOC4350646 ATP-dependent DNA helicase At3g02060, chloroplastic 4350646 Os11g0533100 4.4 5.2
 3.6
 4.9
 2.3
1.0
 2.5
1.4
 3.1
 1.7
1.5
 3.8
27 LOC4325304 pentatricopeptide repeat-containing protein At4g21190 4325304 Os01g0757700 4.4 4.7
 4.2
 5.6
 1.9
1.3
 2.5
2.4
 2.5
 1.6
 1.3
28 LOC9270576 maf-like protein DDB_G0281937 9270576 Os03g0229600 4.4 3.7
 5.1
 1.0
0.4
 1.4
0.6
 1.4
0.3
 2.0
1.5
 1.9
 1.3
0.8
29 LOC4343250 asparagine--tRNA ligase, chloroplastic/mitochondrial 4343250 Os07g0485400 4.4 4.3
 4.5
 0.8
 4.2
3.7
 4.1
3.7
 4.1
 3.6
3.0
 1.7
30 LOC9269607 uncharacterized LOC9269607 9269607 Os02g0266500 4.4 4.0
 4.7
 2.7
 2.8
 4.3
 0.2
 2.7
 1.1
31 LOC4327567 Ribonuclease III domain-containing protein RNC1, chloroplastic 4327567 OSNPB_010810100 4.4 3.4
 5.4
 2.0
 2.3
1.5
 2.1
1.7
 2.4
 2.8
 1.3
32 LOC4345863 RNA-binding protein CP33, chloroplastic 4345863 Os08g0483200 4.3 4.0
 4.7
 3.0
 1.1
0.9
 0.8
-0.0
 2.4
 1.6
 0.7
33 LOC4345271 ribonuclease E/G-like protein, chloroplastic 4345271 Os08g0323600 4.3 4.4
 4.2
 5.6
 1.2
1.0
 2.9
2.3
 4.5
 2.9
 2.4
34 LOC4350378 protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like 4350378 Os11g0425300 4.3 4.0
 4.6
 2.0
 1.1
0.9
 1.8
0.5
 3.3
 2.5
 1.6
35 LOC4325168 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 4325168 Os01g0271400 4.3 4.2
 4.4
 2.0
 3.4
2.7
 2.6
2.0
 5.0
 2.1
 1.1
36 LOC9271035 DNA topoisomerase 1 9271035 Os06g0281400 4.2 4.1
 4.4
 1.8
 2.1
1.8
 2.5
2.1
 2.9
 3.1
 2.6
37 LOC4340049 probable ribosome-binding factor A, chloroplastic 4340049 Os06g0137600 4.2 4.6
 3.9
 0.0
 2.8
 1.5
 1.6
 1.1
 2.1
38 LOC4350988 GTPase Der 4350988 Os11g0638000 4.2 4.0
 4.5
 6.0
 2.2
 2.8
 2.4
 3.4
 2.6
39 LOC4332899 uncharacterized LOC4332899 4332899 Os03g0363400 4.2 3.2
 5.3
 4.1
 3.4
 3.0
 1.4
 2.2
 1.2
-0.0
40 LOC9270395 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial 9270395 Os12g0485000 4.2 3.4
 5.0
 3.5
 3.6
 3.7
 2.1
 2.5
 2.7
41 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 4.2 4.2
 4.2
 2.8
 3.5
2.3
 2.5
2.2
 3.3
 3.4
 1.7
42 LOC4347821 cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial-like 4347821 Os09g0556500 4.1 3.3
 4.9
 2.8
 2.9
2.8
 2.3
2.0
 2.9
 1.3
 2.5
43 wsl6 white stripe leaf6 9271571 OSNPB_050567300 4.1 4.7
 3.5
 3.3
 4.0
0.6
 3.1
0.1
 3.6
 2.7
 0.5
44 LOC4332018 methionine--tRNA ligase, chloroplastic/mitochondrial 4332018 Os03g0209600 4.1 4.2
 4.0
 1.9
 2.5
1.8
 3.2
1.6
 2.9
 2.6
 1.4
45 LOC4337429 endonuclease MutS2 4337429 Os04g0680700 4.1 4.9
 3.3
 3.5
 4.5
 2.9
 1.3
 1.6
 1.3
46 LOC4336345 DNA mismatch repair protein MSH1, mitochondrial 4336345 Os04g0507016 4.1 4.1
 4.1
 1.7
 3.4
0.5
 3.0
0.5
 0.4
 2.6
 1.9
47 LOC4351050 peptide chain release factor APG3, chloroplastic 4351050 Os11g0657100 4.1 4.6
 3.5
 5.1
 3.3
3.1
 3.0
1.6
 2.4
 2.0
 2.1
48 LOC4345983 putative tRNA (cytidine(34)-2'-O)-methyltransferase 4345983 Os08g0506500 4.0 5.4
2.6
 2.9
 2.8
 4.1
 2.9
 2.6
49 LOC4341108 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic 4341108 Os06g0498900 4.0 4.4
 3.7
 2.6
 1.4
 1.2
 2.0
 3.5
 1.5
50 LOC4328006 putative nitric oxide synthase 4328006 OSNPB_020104700 4.0 3.4
 4.7





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