Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4345655   pentatricopeptide repeat-containing protein At3g47530 
 osa-r.5   4345655   pentatricopeptide repeat-containing protein At3g47530 
 osa-m.8   4345655   pentatricopeptide repeat-containing protein At3g47530 
 ath-u.4   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.4   100788135   pentatricopeptide repeat-containing protein At3g47530 
 sly-u.4   101263802   pentatricopeptide repeat-containing protein At3g47530 
 mtr-u.4   120580098   pentatricopeptide repeat-containing protein At3g47530 

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Top 50 coexpressed genes to 4345655 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa380   Tryptophan metabolism  1 60 -
 osa3008   Ribosome biogenesis in eukaryotes  1 90 -

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osa:LOC4345655 (pentatricopeptide repeat-containing protein At3g47530) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4345655
osa-r.5
for
4345655
osa-m.8
for
4345655
ath-u.4
for
AT3G47530
gma-u.4
for
100788135
sly-u.4
for
101263802
mtr-u.4
for
120580098
1 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 4.4 4.1
 4.6
 6.6
 4.7
 2.4
 5.2
2 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 4.3 3.9
 4.6
 5.0
 4.5
 3.8
 3.6
3.6
3 LOC4346364 probable transcription factor At2g01370 4346364 Os09g0100800 4.1 3.5
 4.7



4 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 4.1 3.7
 4.5



5 LOC4339672 pentatricopeptide repeat-containing protein At5g39680 4339672 Os05g0572900 4.0 3.2
 4.8
 4.7
 4.1
 3.0
 2.5
6 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 3.8 4.2
 3.4



7 LOC4327598 putative pentatricopeptide repeat-containing protein At5g40405 4327598 Os01g0814300 3.8 4.1
 3.5

4.1
8 LOC4338264 putative pentatricopeptide repeat-containing protein At1g10330 4338264 Os05g0271900 3.8 5.0
 2.5
 2.3
 3.5
 -0.9
9 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 3.7 2.7
 4.7
 5.9
 3.3
 2.5
10 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300 3.7 3.6
 3.9
 1.3
 -0.5
 -0.6
 0.6
11 LOC4334929 pentatricopeptide repeat-containing protein At3g29230 4334929 Os04g0110500 3.6 3.5
 3.7



12 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 3.6 2.2
 5.0
4.6
 3.9
 2.9
13 LOC4344262 pentatricopeptide repeat-containing protein At3g18020 4344262 Os07g0674300 3.6 4.3
 2.8
 5.9
 5.5
 2.1
 6.1
14 LOC4344353 pentatricopeptide repeat-containing protein At1g13040, mitochondrial 4344353 Os07g0688100 3.5 3.5
 3.5
 2.5
 3.3
 2.4
 4.3
15 LOC4340651 pentatricopeptide repeat-containing protein At3g61520, mitochondrial 4340651 Os06g0249500 3.4 3.2
 3.7
 6.4
6.4
 4.4
 4.3
 2.0
16 LOC4348019 putative FBD-associated F-box protein At1g78730 4348019 Os10g0126600 3.4 2.4
 4.4



17 LOC4328019 putative pentatricopeptide repeat-containing protein At1g68930 4328019 Os02g0106300 3.4 2.7
 4.1
 5.7
 3.6
 2.4
 2.8
0.8
18 LOC107275716 pentatricopeptide repeat-containing protein At5g41170, mitochondrial 107275716 Os12g0615600 3.4 4.5
2.4
 2.0
1.2
 -0.5
 1.6
19 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 3.3 2.7
 4.0
6.1
4.7
 3.2
20 LOC4344035 pentatricopeptide repeat-containing protein At5g48910 4344035 Os07g0636900 3.3 3.8
 2.8



21 LOC107278606 pentatricopeptide repeat-containing protein At5g39350 107278606 Os02g0663900 3.3 4.6
6.9
 0.9
 2.8
 3.5
22 LOC4350640 uncharacterized LOC4350640 4350640 Os11g0532000 3.3 3.2
 3.4



23 LOC4339896 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4339896 Os06g0112000 3.3 3.9
 2.7
 3.5
 4.9
3.4
 2.8
 4.3
0.3
24 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600 3.3 3.4
 3.1
4.5
 0.1
 4.2
25 LOC4327814 pentatricopeptide repeat-containing protein At3g16610 4327814 Os01g0977400 3.2 3.4
 3.1
3.3
2.6
26 LOC4351677 pentatricopeptide repeat-containing protein At2g33760 4351677 Os12g0181900 3.2 1.6
 4.8
3.7

27 LOC4337713 pentatricopeptide repeat-containing protein At3g48810 4337713 Os05g0132000 3.2 4.2
0.7
 4.1
 1.0
 1.5
28 LOC4337840 pentatricopeptide repeat-containing protein At2g13600 4337840 Os05g0153400 3.2 3.6
 2.7



29 LOC107278384 pentatricopeptide repeat-containing protein At4g02750 107278384 Os04g0432800 3.2 4.1




30 LOC4335337 uncharacterized LOC4335337 4335337 3.1 2.7
 3.5



31 LOC107277521 putative pentatricopeptide repeat-containing protein At1g56570 107277521 Os01g0299200 3.1 4.1
3.6
4.3
 4.1
32 LOC4348716 UPF0434 protein RPE_0408 4348716 Os10g0438700 3.1 2.4
 3.8
 -0.9
 0.9
0.0
 -0.1
 0.7
33 LOC107277967 putative pentatricopeptide repeat-containing protein At5g09950 107277967 Os01g0589900 3.1 4.0
4.1
 5.0
 1.7
 3.3
34 LOC4325056 uncharacterized LOC4325056 4325056 Os01g0858700 3.1 3.0
 3.1
 1.2
 1.0
0.2
 -0.8
 -0.1
35 LOC9270751 putative disease resistance protein RGA1 9270751 Os01g0149350 3.0 2.8
 3.3



36 LOC9271256 importin-11 9271256 Os03g0292900 3.0 1.1
 4.9
 -0.3
 1.7
1.3
 0.3
 0.4
37 LOC9269859 uncharacterized LOC9269859 9269859 3.0 3.8




38 LOC9268866 uncharacterized LOC9268866 9268866 Os04g0479700 3.0 2.8
 3.1



39 LOC4324511 putative disease resistance protein RGA1 4324511 Os01g0149500 2.9 4.1




40 LOC107278543 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 107278543 Os07g0203900 2.9 3.7


1.2
41 LOC4331709 probable indole-3-pyruvate monooxygenase YUCCA7 4331709 Os03g0162000 2.8 3.3
 2.4



42 LOC4338370 pentatricopeptide repeat-containing protein At2g34400 4338370 Os05g0307200 2.8 3.7
4.8
 5.2
2.8
 2.7
43 LOC4333574 GTPase LSG1-2 4333574 Os03g0647500 2.8 2.7
 3.0
 1.3
1.1
 2.9
2.4
 0.1
 0.5
44 LOC4334193 pentatricopeptide repeat-containing protein At1g77360, mitochondrial 4334193 Os03g0761300 2.8 1.7
 3.9
 4.3
 0.9
 2.4
 0.8
45 LOC4351121 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4351121 Os11g0680200 2.8 1.5
 4.1
 4.7
 5.1
 3.5
46 LOC9267933 uncharacterized LOC9267933 9267933 Os11g0549610 2.8 3.6




47 LOC4350039 F-box protein At4g22280 4350039 Os11g0208400 2.8 3.6




48 LOC4329581 protein ILITYHIA 4329581 Os02g0538400 2.8 3.5




49 LOC4346745 pentatricopeptide repeat-containing protein At4g02750 4346745 Os09g0327200 2.8 3.6
6.1
 5.1
3.6
 3.8
 5.5
1.7
50 LOC4349873 uncharacterized LOC4349873 4349873 Os11g0167300 2.8 4.1
 1.4
 2.7
2.6
 3.3
2.9
 2.7
 4.2
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