Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4345863   RNA-binding protein CP33, chloroplastic 
 osa-r.5   4345863   RNA-binding protein CP33, chloroplastic 
 osa-m.8   4345863   RNA-binding protein CP33, chloroplastic 
 ath-u.4   AT4G09040   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.4   100806480   28 kDa ribonucleoprotein, chloroplastic 
 gma-u.4   100790439   RNA-binding protein CP31B, chloroplastic 
 sly-u.4   101266507   28 kDa ribonucleoprotein, chloroplastic 
 ppo-u.4   7486573   28 kDa ribonucleoprotein, chloroplastic 
 mtr-u.4   11431177   28 kDa ribonucleoprotein, chloroplastic 

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Top 50 coexpressed genes to 4345863 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4712   Circadian rhythm - plant  1 41 -
 osa30   Pentose phosphate pathway  1 57 -
 osa3018   RNA degradation  1 112 -
 osa480   Glutathione metabolism  1 114 -
 osa1200   Carbon metabolism  1 273 -

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osa:LOC4345863 (RNA-binding protein CP33, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4345863
osa-r.5
for
4345863
osa-m.8
for
4345863
ath-u.4
for
AT4G09040
gma-u.4
for
100806480
gma-u.4
for
100790439
sly-u.4
for
101266507
ppo-u.4
for
7486573
mtr-u.4
for
11431177
1 LOC4329441 uncharacterized LOC4329441 4329441 Os02g0507400 9.6 8.7
 10.4
 0.6
 3.8
3.2
 2.2
1.5
 1.9
 2.3
1.6
 1.1
2 LOC4344632 multiple organellar RNA editing factor 9, chloroplastic 4344632 Os08g0139100 9.2 10.2
 8.2
 6.2
0.8
 5.5
3.8
 5.8
5.0
 4.4
 4.9
1.7
 3.7
0.9
3 LOC4327567 Ribonuclease III domain-containing protein RNC1, chloroplastic 4327567 OSNPB_010810100 9.1 9.3
 8.9
 7.7
 6.2
5.1
 5.8
5.2
 3.8
 3.9
 2.9
4 LOC4350646 ATP-dependent DNA helicase At3g02060, chloroplastic 4350646 Os11g0533100 8.4 7.2
 9.7
 5.0
 3.8
2.7
 2.6
1.1
 3.3
 1.7
1.5
 2.2
5 LOC4344860 pentatricopeptide repeat-containing protein At3g59040 4344860 Os08g0191900 7.3 7.9
 6.7
 6.8
 4.3
3.7
 3.9
2.2
 5.0
 3.3
 2.0
6 LOC4333513 protein OSB2, chloroplastic 4333513 Os03g0633900 7.3 5.8
 8.7
 0.0
 2.9
1.9
 3.4
2.8
 3.0
0.1
 2.6
1.8
 2.4
0.3
7 LOC4341453 protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 4341453 Os06g0601000 7.2 6.5
 7.9
 4.6
 4.5
2.8
 6.0
1.1
 1.5
 1.8
 2.1
8 LOC4329586 ribonuclease J 4329586 Os02g0539600 7.0 7.1
 6.9
 5.4
 7.5
4.1
 5.7
1.5
 5.0
 3.7
2.1
 1.7
0.7
9 LOC9268627 carboxymethylenebutenolidase homolog 9268627 Os05g0429500 6.5 6.2
 6.9
 0.1
 1.4
 2.6
 1.7
 0.3
 0.9
10 LOC4332686 uncharacterized LOC4332686 4332686 Os03g0322600 6.5 4.9
 8.1
 6.3
 3.1
2.1
 4.2
3.9
 4.3
 1.5
 2.5
11 LOC4344001 29 kDa ribonucleoprotein A, chloroplastic 4344001 Os07g0631900 6.5 7.1
 5.9
 5.4
5.1
 6.6
6.0
 5.3
5.3
 6.1
5.0
 5.1
2.8
 4.6
12 LOC4328440 pentatricopeptide repeat-containing protein At2g35130 4328440 Os02g0170000 6.5 5.0
 7.9
 1.4
 2.2
 2.2
 2.6
 0.7
 1.5
13 LOC4325906 protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic 4325906 Os01g0673800 6.4 6.6
 6.2
 0.3
 2.8
 2.1
 3.4
0.9
 2.6
 0.6
14 LOC4339664 protein WHAT'S THIS FACTOR 1 homolog 4339664 Os05g0571100 6.4 8.0
 4.8
 3.9
 3.3
2.2
 3.5
2.0
 2.5
 3.2
2.0
 3.3
15 LOC4339536 CRM-domain containing factor CFM3, chloroplastic/mitochondrial 4339536 Os05g0551900 6.3 8.9
7.6
 3.2
3.2
 3.4
2.8
 4.0
 2.4
 4.5
-0.3
16 LOC4326442 light-regulated protein, chloroplastic-like 4326442 OSNPB_010102900 6.2 6.3
 6.1
 1.4
 2.6
1.5
 0.9
0.3
 0.8
 0.9
 2.2
17 LOC4340049 probable ribosome-binding factor A, chloroplastic 4340049 Os06g0137600 6.1 6.3
 5.9
 5.2
 3.6
 3.2
 3.6
 3.8
 2.1
18 LOC4335654 uncharacterized LOC4335654 4335654 Os04g0386500 6.0 4.6
 7.5
 0.6
 3.8
3.2
 2.2
1.5
 1.9
 2.3
1.6
 1.1
19 LOC4334623 pentatricopeptide repeat-containing protein At1g74850, chloroplastic 4334623 Os03g0824100 6.0 6.8
 5.2
 6.0
 3.7
3.1
 4.3
2.4
 5.0
 4.0
 3.4
20 LOC4337512 uncharacterized LOC4337512 4337512 Os04g0692200 6.0 6.3
 5.6
 3.2
 3.8
3.3
 4.4
3.2
 1.5
 1.0
 2.5
1.0
21 LOC4336948 methionine aminopeptidase 1B, chloroplastic 4336948 Os04g0610500 5.8 6.6
 4.9
 4.5
 3.6
3.4
 4.2
3.5
 4.3
 4.5
 3.0
22 LOC4327403 pentatricopeptide repeat-containing protein At5g39980, chloroplastic 4327403 Os01g0833000 5.8 4.1
 7.4
 4.2
 4.1
2.5
 4.5
2.7
 4.1
 3.1
 2.7
23 LOC4333103 glucose-6-phosphate 1-dehydrogenase, chloroplastic 4333103 Os03g0412800 5.7 4.0
 7.5
 2.8
0.0
 2.8
1.2
 1.6
1.5
 2.5
-0.1
 1.5
-1.0
 0.7
0.5
24 LOC4337691 uncharacterized LOC4337691 4337691 Os05g0128100 5.7 6.1
 5.4
 0.4
 2.4
2.4
 1.9
1.8
1.8
 2.8
25 LOC4338807 thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic 4338807 Os05g0417200 5.7 6.7
 4.7
 4.7
 5.4
 3.1
 4.2
 3.1
 1.9
26 LOC4347448 protein Iojap, chloroplastic 4347448 Os09g0493600 5.6 5.6
 5.6
 7.5
 5.6
4.9
 5.7
3.0
 5.5
 2.7
1.0
 3.0
27 LOC4330883 uncharacterized LOC4330883 4330883 Os02g0773500 5.6 5.3
 5.9





28 LOC4327742 uncharacterized RNA methyltransferase pc1998 4327742 Os01g0920300 5.6 5.2
 5.9
 5.3
 4.5
 3.0
 3.7
 1.9
 1.3
29 LOC9270258 protease Do-like 2, chloroplastic 9270258 Os05g0147500 5.5 5.8
 5.3
 5.0
 5.7
3.5
 8.3
4.9
 6.6
3.8
 2.8
0.2
 3.7
30 LOC4343652 chaperonin-like RbcX protein 2, chloroplastic 4343652 Os07g0569600 5.5 4.4
 6.7
 -0.8
 0.9
0.5
 -0.0
-0.3
 2.5
1.2
 0.8
-1.1
 -0.5
31 LOC4326612 probable aldo-keto reductase 1 4326612 Os01g0618100 5.4 4.5
 6.3
-0.4
-0.9
 -0.1
-0.5
 1.2
-0.3
 0.8
0.3
 1.1
0.1
32 LOC112936010 sec-independent protein translocase protein TATA, chloroplastic 112936010 5.2 7.4
3.5
 2.2
2.1
 1.2
1.0
 1.5
 3.2
2.9
 2.5
1.5
33 LOC4334030 putative rRNA methyltransferase YlbH 4334030 Os03g0736400 5.2 5.0
 5.4
 5.9
 3.3
 2.8
 3.9
 2.2
 3.3
34 LOC4327482 zinc finger protein VAR3, chloroplastic 4327482 Os01g0815700 5.2 3.2
 7.1
 1.0
 2.1
1.5
 4.3
1.6
 1.8
 3.0
 1.2
35 LOC4332471 pentatricopeptide repeat-containing protein At5g02830, chloroplastic 4332471 Os03g0284900 5.1 2.8
 7.5
 1.3
 2.0
 3.2
 1.1
 1.6
 1.4
36 LOC4331652 putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic 4331652 Os03g0152700 5.1 4.3
 5.8
 6.4
 3.9
 4.1
 2.8
 1.2
 4.8
37 LOC4327790 probable 2-carboxy-D-arabinitol-1-phosphatase 4327790 Os01g0237100 5.1 4.3
 5.9
1.9
0.9
 3.5
2.4
 1.0
 0.4
 1.5
38 LOC4345334 phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like 4345334 OSNPB_080344600 5.1 6.1
 4.1
 -0.3
-0.3
 1.2
0.9
 3.0
0.7
 0.9
0.6
 0.7
0.6
 1.4
0.1
39 LOC107279834 chaperonin 60 subunit beta 4, chloroplastic-like 107279834 5.0 7.0
5.2
3.2
 3.8
3.8
 5.1
4.0
 6.9
3.9
 3.5
3.2
 4.0
3.3
40 LOC4326994 CRS2-associated factor 2, chloroplastic 4326994 OSNPB_010323300 5.0 4.2
 5.9
 2.2
 3.1
 2.2
 4.1
 1.7
 1.6
41 LOC4347659 rhodanese-like domain-containing protein 14, chloroplastic 4347659 Os09g0530000 5.0 3.3
 6.6
 1.2
 2.4
1.1
 1.4
0.2
 1.3
 1.6
1.4
42 LOC4349444 uncharacterized LOC4349444 4349444 Os10g0569000 5.0 5.7
 4.2
 2.9
 3.2
1.9
 3.0
1.7
 0.3
 2.4
 0.1
43 LOC4325329 protein GIGANTEA-like 4325329 OSNPB_010182600 4.9 4.3
 5.6
 -1.2
 0.9
0.9
 0.7
0.6
 0.5
0.4
 -0.4
-0.5
44 LOC4333802 uncharacterized LOC4333802 4333802 Os03g0695500 4.9 5.1
 4.8
 0.4
 1.2
 1.2
 4.3
 0.3
 1.1
45 LOC4348654 pentatricopeptide repeat-containing protein At4g31850, chloroplastic 4348654 Os10g0421800 4.9 4.3
 5.6
 3.8
 2.2
 1.5
 4.3
2.2
46 LOC4343532 pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic-like 4343532 OSNPB_070548300 4.9 5.1
 4.7
 2.8
 2.4
1.2
 3.2
2.7
 1.2
 2.3
1.0
 2.8
47 LOC4339778 RNA polymerase sigma factor sigC 4339778 Os05g0589200 4.9 5.1
 4.6
 0.5
 1.4
 1.8
 3.3
 -0.2
 3.2
48 LOC4341695 DNA-directed RNA polymerase 3B, chloroplastic 4341695 Os06g0652000 4.8 4.2
 5.4
 3.1
-0.1
 1.1
0.3
 1.0
-0.8
 2.1
-0.5
 1.3
1.1
 1.0
-0.2
49 LOC4334387 probable zinc metalloprotease EGY1, chloroplastic 4334387 OSNPB_030792400 4.8 4.7
 4.9
 5.1
 3.5
2.8
 4.0
3.7
 3.3
 1.5
 2.3
50 LOC4336846 UV-B-induced protein At3g17800, chloroplastic 4336846 Os04g0596300 4.8 3.7
 5.8
 0.6
 0.4
-0.6
 0.1
-1.0
1.2
 3.6
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