Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4345875   uncharacterized LOC4345875 
 osa-r.5   4345875   uncharacterized LOC4345875 
 osa-m.8   4345875   uncharacterized LOC4345875 
 ath-u.4   AT5G65250   uncharacterized protein 
 gma-u.4   100809936   uncharacterized LOC100809936 
 gma-u.4   100790782   uncharacterized LOC100790782 
 sly-u.4   101259600   uncharacterized LOC101259600 
 ppo-u.4   7479185   uncharacterized LOC7479185 
 ppo-u.4   7490199   uncharacterized LOC7490199 
 mtr-u.4   25501879   uncharacterized LOC25501879 

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Top 50 coexpressed genes to 4345875 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa450   Selenocompound metabolism  1 19 -
 osa860   Porphyrin metabolism  1 42 -
 osa970   Aminoacyl-tRNA biosynthesis  1 117 -
 osa270   Cysteine and methionine metabolism  1 122 -
 osa1230   Biosynthesis of amino acids  1 234 -

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osa:LOC4345875 (uncharacterized LOC4345875) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4345875
osa-r.5
for
4345875
osa-m.8
for
4345875
ath-u.4
for
AT5G65250
gma-u.4
for
100809936
gma-u.4
for
100790782
sly-u.4
for
101259600
ppo-u.4
for
7479185
ppo-u.4
for
7490199
mtr-u.4
for
25501879
1 LOC4334445 probable GTP-binding protein OBGC2 4334445 OSNPB_030799700 6.2 6.0
 6.5
2.8
1.2
 2.6
0.6
 1.9
 0.8
 1.8
 2.1
2 LOC4326401 probable dual-specificity RNA methyltransferase RlmN 4326401 Os01g0973400 5.4 4.0
 6.7
 2.1
 1.9
1.4
 1.4
1.2
 0.6
 1.0
 0.9
 1.8
3 LOC4328239 ribosomal RNA small subunit methyltransferase H 4328239 Os02g0137600 5.2 2.7
 7.7
 1.9
 2.1
1.8
 3.2
2.5
 0.7
 1.7
 2.9
 2.0
4 LOC4334251 cytochrome c biogenesis protein CCS1, chloroplastic-like 4334251 OSNPB_030769600 5.0 6.0
 4.1
 -1.0
 1.9
 1.1
 0.9
 -0.0
 1.0
 -0.0
5 LOC4332158 GTP-binding protein At2g22870 4332158 Os03g0232500 4.9 2.9
 6.8
 -0.0
 3.4
2.0
 3.4
2.2
 1.0
 2.5
 1.7
 2.2
6 LOC4332811 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 4332811 Os03g0344900 4.7 4.0
 5.5
 2.5
 3.6
 4.3
 -0.4
 2.8
 2.2
 2.2
7 LOC4334778 arginine decarboxylase 4334778 Os03g0848100 4.6 4.0
 5.2
0.6
 0.6
 3.0
0.5
 1.0
 -0.1
 0.5
-1.0
8 LOC4328108 pentatricopeptide repeat-containing protein At2g17033 4328108 Os02g0120000 4.4 3.5
 5.4
 1.6
 2.9
 2.6
 2.5
 2.4
 2.0
 3.1
9 LOC4349151 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic 4349151 Os10g0522500 4.4 2.8
 6.0
 4.4
 2.3
 2.4
 1.1
 0.5
 1.4
 0.4
10 LOC4332899 uncharacterized LOC4332899 4332899 Os03g0363400 4.4 4.7
 4.2
 1.7
 2.1
 1.5
 0.8
 0.3
 1.0
 -0.1
-0.2
11 LOC4325801 chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like 4325801 OSNPB_010132800 4.3 3.4
 5.3
 1.7
0.1
 2.0
 1.8
 1.6
 -0.3
 1.4
 -0.3
-1.0
12 LOC4346858 CRM-domain containing factor CFM3, chloroplastic/mitochondrial 4346858 Os09g0363100 4.3 4.5
 4.2
 0.8
 2.0
 0.4
 1.7
 -0.6
 1.6
 2.4
13 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 4.2 3.5
 4.9
 0.6
 3.0
2.6
 3.4
2.9
 1.6
 0.2
 2.1
 1.5
14 LOC4327479 cysteine synthase-like 4327479 Os01g0814800 4.2 4.1
 4.3
 0.9


-0.1
 0.5
 0.9
15 LOC4342744 KHG/KDPG aldolase 4342744 Os07g0222900 4.2 4.2
 4.1
-0.1
 0.0
 -0.0
 0.2
 0.7
16 LOC9266673 proteinaceous RNase P 1, chloroplastic/mitochondrial-like 9266673 4.1 2.3
 6.0
 -0.3
 2.8
1.2
 2.7
2.6
 1.5
 0.6
-0.1
 2.1
0.6
 1.4
17 LOC4331537 ankyrin repeat domain-containing protein, chloroplastic 4331537 Os03g0135600 4.0 4.1
 4.0
 5.6
 6.3
3.5
 3.6
2.8
 3.1
 1.4
0.9
 2.2
1.3
 1.4
0.1
18 LOC4339896 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4339896 Os06g0112000 4.0 3.2
 4.9
 0.0
 2.4
0.6
 1.5
1.0
 -0.0
 0.5
 0.9
 1.7
0.3
19 wsl white stripe leaf 4324682 Os01g0559500 4.0 2.5
 5.5
 0.7
 1.4
 1.0
 -0.2
 0.4
0.3
 1.4
1.3
 0.3
20 LOC4332354 OTU domain-containing protein At3g57810 4332354 Os03g0266000 3.9 4.0
 3.9
 2.5
 1.2
 0.8
 1.8
 1.5
 2.7
 1.1
21 LOC4334649 DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like 4334649 OSNPB_030827700 3.9 4.1
 3.8
 1.3
 2.8
2.6
 3.5
1.7
 2.1
 0.9
-0.1
 2.4
0.7
 2.2
22 LOC4327311 uncharacterized RNA methyltransferase BH0687 4327311 Os01g0193600 3.9 4.1
 3.8
 0.3
 2.1
 1.8
 2.4
 0.9
 2.5
 3.0
23 LOC4334030 putative rRNA methyltransferase YlbH 4334030 Os03g0736400 3.9 4.4
 3.4
 1.3
 0.5
 1.2
 1.3
 2.1
 1.7
 1.7
24 LOC4338725 protein ABCI12, chloroplastic 4338725 Os05g0400600 3.9 2.8
 5.0
 1.8
 4.2
 4.5
 3.1
 0.9
 0.2
 1.8
25 LOC4346941 DEAD-box ATP-dependent RNA helicase 22-like 4346941 OSNPB_090383400 3.9 2.5
 5.3
 -0.0
 1.6
 0.4
 1.1
 0.7
 0.5
 1.2
26 LOC4330083 DEAD-box ATP-dependent RNA helicase 47A-like 4330083 OSNPB_020636300 3.9 4.4
 3.4
 1.7
 2.6
1.4
 1.8
0.3
 1.1
 2.2
 1.0
 1.5
27 LOC4325947 branchpoint-bridging protein 4325947 Os01g0715000 3.9 3.8
 3.9
 0.2
 -0.6
 0.3
 0.5
 0.6
 1.5
 -1.3
28 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 3.9 4.0
 3.8
 0.4
 3.7
3.4
 5.0
2.4
 1.8
 1.2
0.8
 1.7
1.7
 1.4
29 LOC4324049 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 4324049 Os01g0507900 3.9 4.2
 3.5
 1.8
 3.6
2.8
 3.9
2.4
 2.0
 2.5
 2.1
 1.7
30 LOC4342081 RNA pseudouridine synthase 2, chloroplastic-like 4342081 OSNPB_060717400 3.8 3.4
 4.2
 3.0
 2.6
 -0.2
 0.5
 0.1
 2.5
 1.4
31 LOC4338498 chlorophyll synthase, chloroplastic-like 4338498 OSNPB_050349700 3.8 3.2
 4.5
 2.0
 2.8
1.5
 2.5
1.2
 2.3
 -0.8
-0.8
 2.5
-0.9
 1.4
32 LOC4329168 motile sperm domain-containing protein 2 4329168 Os02g0321500 3.8 4.8
 2.8
 0.5
 2.0
-0.4
 2.8
0.3
 1.3
 0.9
 2.8
 1.9
33 LOC4341808 twinkle homolog protein, chloroplastic/mitochondrial 4341808 Os06g0671700 3.7 4.3
 3.2
 -0.2
 1.3
0.8
 1.5
1.2
 -0.2
 -0.9
 0.9
 -0.6
34 LOC4339686 pentatricopeptide repeat-containing protein At1g15510, chloroplastic 4339686 Os05g0574800 3.7 5.2
-0.1
 0.1
 0.7
 0.7
 -0.6
 1.0
 0.4
35 LOC4325344 DEAD-box ATP-dependent RNA helicase 39-like 4325344 OSNPB_010184500 3.7 3.8
 3.6
 1.7
 3.5
 4.1
 2.0
 0.4
 0.3
 1.4
36 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 3.7 3.8
 3.6
 1.9
1.5
 3.4
3.2
 1.8
1.7
 2.2
1.6
 0.9
0.6
 2.2
1.6
 2.2
37 LOC4330165 U6 snRNA phosphodiesterase 4330165 Os02g0651000 3.7 2.2
 5.2
 1.6
 -0.4
 0.6
 -1.7
 -0.5
-0.5
 -0.0
-0.4
 0.1
-0.4
38 LOC4350988 GTPase Der 4350988 Os11g0638000 3.7 4.6
 2.7
 2.2
 2.4
 2.1
 0.3
 0.7
 0.3
 0.7
39 LOC4332018 methionine--tRNA ligase, chloroplastic/mitochondrial 4332018 Os03g0209600 3.7 4.0
 3.3
 1.6
 3.3
2.8
 3.1
2.6
 3.2
 2.3
 1.4
 0.4
40 LOC4332127 uncharacterized LOC4332127 4332127 Os03g0226700 3.6 2.0
 5.3
 -0.1
 4.9
3.4
 3.8
2.3
 1.0
 1.0
 2.6
 1.9
41 LOC4349809 signal recognition particle 54 kDa protein, chloroplastic 4349809 Os11g0153700 3.6 3.6
 3.7
 1.6
 3.0
0.8
 3.2
1.4
 2.1
 0.8
0.1
 0.9
0.8
 2.2
42 LOC4326542 uncharacterized tRNA/rRNA methyltransferase MRA_3618 4326542 Os01g0742000 3.6 4.8
1.5
 1.6
 1.7
 0.8
 0.1
 1.1
 3.0
43 LOC4326265 Holliday junction resolvase MOC1, chloroplastic 4326265 Os01g0268900 3.6 4.5
 2.8
 0.6
 1.1
0.9
 2.4
2.3
 2.1
 2.5
 2.7
 1.0
44 LOC4337150 DNA polymerase I A, chloroplastic-like 4337150 Os04g0637400 3.6 3.9
 3.3
 -0.1
-0.3
 2.8
1.7
 3.0
1.4
 2.1
 1.0
0.0
 2.2
1.0
 2.0
1.6
45 wsl4 white stripe leaf4 4329703 Os02g0565400 3.6 3.1
 4.1






46 LOC4324676 uncharacterized LOC4324676 4324676 Os01g0558800 3.6 3.7
 3.5
 0.7
 2.1
1.4
 2.2
1.2
 1.4
 1.5
 1.1
 2.6
47 LOC4349098 uncharacterized LOC4349098 4349098 Os10g0512500 3.5 4.4
 2.6
 2.7
 2.3
 2.5
 2.4
 2.4
 3.1
 3.7
48 LOC4334412 pentatricopeptide repeat-containing protein At2g02980, chloroplastic 4334412 Os03g0795200 3.5 1.6
 5.4
 -0.3
 1.7
 0.5
 1.1

1.8
49 LOC4327755 uncharacterized protein At4g37920 4327755 Os01g0306800 3.5 5.0
 2.0
 1.9
 2.2
2.1
 2.2
1.6
 1.1
 1.6
 2.6
 1.2
50 LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like 4326614 OSNPB_010618400 3.5 4.0
 2.9
 1.7
0.8
 2.5
2.0
 3.2
2.3
 -0.1
 0.2
-0.7
 0.9
0.1
 1.7
1.6
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