Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4345972   uncharacterized LOC4345972 
 osa-r.5   4345972   uncharacterized LOC4345972 
 osa-m.8   4345972   uncharacterized LOC4345972 
 osa-u.4   9266635   uncharacterized LOC9266635 
 ath-u.4   AT3G12640   RNA binding (RRM/RBD/RNP motifs) family protein 
 gma-u.4   100817963   nucleolin 2 
 gma-u.4   100787464   uncharacterized LOC100787464 
 sly-u.4   101267843   uncharacterized LOC101267843 
 ppo-u.4   7480090   uncharacterized LOC7480090 
 ppo-u.4   7482274   uncharacterized LOC7482274 
 mtr-u.4   11425456   nucleolin 2 
 mtr-u.4   11446344   uncharacterized LOC11446344 

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Top 50 coexpressed genes to 4345972 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3040   Spliceosome  4 177 3.28
 osa3013   Nucleocytoplasmic transport  3 109 2.80
 osa3250   Viral life cycle - HIV-1  2 32 2.68
 osa3022   Basal transcription factors  2 41 2.47
 osa3015   mRNA surveillance pathway  2 115 -

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osa:LOC4345972 (uncharacterized LOC4345972) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4345972
osa-r.5
for
4345972
osa-m.8
for
4345972
osa-u.4
for
9266635
ath-u.4
for
AT3G12640
gma-u.4
for
100817963
gma-u.4
for
100787464
sly-u.4
for
101267843
ppo-u.4
for
7480090
ppo-u.4
for
7482274
mtr-u.4
for
11425456
mtr-u.4
for
11446344
1 LOC4342361 uncharacterized LOC4342361 4342361 Os07g0137900 6.0 4.3
 7.6
 1.6
 3.8
 4.6
4.3
 3.9
3.3
 4.1
 1.4
 1.7
 2.2
 2.7
2 LOC9270554 transcription elongation factor SPT6-like 9270554 Os05g0494900 5.5 4.6
 6.4
 2.0
 2.0
0.5
 5.1
3.5
 4.5
4.4
 5.4
 1.1
0.7
 2.9
2.5
 3.4
0.9
 2.6
-0.4
3 LOC9266475 transcription initiation factor TFIID subunit 1-like 9266475 Os06g0645901 5.4 5.2
 5.6
 2.1
 4.0
 2.4
1.9
 3.5
2.9
 4.2
 2.2
2.0
 3.8
3.0
 4.4
 2.2
4 LOC4334344 uncharacterized LOC4334344 4334344 Os03g0785300 5.4 4.3
 6.4
 2.7
0.8
 1.2
 4.2
3.7
 4.1
3.7
 3.7
 2.1
 3.9
 4.7
 2.4
5 LOC4335542 cell division cycle 5-like protein 4335542 Os04g0348300 5.4 4.6
 6.1
 2.1
 4.0
 5.0
3.4
 2.2
2.1
 2.4
 2.9
2.0
 3.6
2.0
 2.8
1.6
 2.8
0.7
6 LOC4344250 uncharacterized LOC4344250 4344250 Os07g0672500 5.3 6.8
 3.8
 1.1
0.9







7 LOC4348695 E3 ubiquitin ligase PQT3-like 4348695 Os10g0431000 5.2 3.5
 7.0
 2.2
 3.3
3.1
 5.5
4.0
 5.2
3.6
 4.9
 3.3
2.7
 2.8
2.5
 1.8
1.3
 2.6
1.5
8 LOC4324336 THO complex subunit 2 4324336 Os01g0916800 4.9 5.0
 4.8
 3.6
 3.3
 3.3
2.6
 4.0
2.9
 6.0
 2.9
2.9
 3.8
3.5
 4.3
3.0
 2.9
2.0
9 LOC4326133 paired amphipathic helix protein Sin3-like 3 4326133 Os01g0109700 4.8 5.0
 4.5
 2.3
0.7
 2.8
2.7
 4.0
3.6
 3.8
3.4
 5.0
3.7
 2.1
1.9
 3.6
3.0
 4.4
3.2
 2.7
1.8
10 LOC4333093 uncharacterized LOC4333093 4333093 Os03g0411000 4.7 2.7
 6.7
 1.3







11 LOC4330687 nuclear-pore anchor 4330687 Os02g0741500 4.5 5.9
 3.0
 3.0
 3.7
 3.6
3.5
 4.9
4.3
 4.4
 1.5
 4.2
 2.8
 2.8
12 LOC4348694 serine/threonine-protein kinase EDR1 4348694 Os10g0430900 4.4 4.0
 4.9
 2.4
2.3
 1.2
 1.2
0.6
 1.2
0.9
 2.1
 3.5
-0.3
 2.8
2.1
 2.8
 1.8
13 LOC4349371 uncharacterized LOC4349371 4349371 Os10g0559700 4.4 5.2
 3.6
 1.5
 2.6
 2.3
1.9
 2.7
2.7
 4.4
 0.7
-0.3
 2.6
2.1
 2.8
1.3
 2.5
1.4
14 LOC4340053 uncharacterized LOC4340053 4340053 Os06g0138200 4.4 1.9
 7.0
 3.2
 0.2
0.1
 3.8
2.3
 3.8
0.8
 2.5
1.6
 3.1
0.9
 1.8
0.2
 2.1
-0.4
 1.9
-1.3
15 LOC4323885 uncharacterized LOC4323885 4323885 Os01g0694400 4.4 6.2
3.9
 3.5
 2.5
2.1
 1.7
1.6
 5.1
 1.5
 3.8
 2.3
 2.9
16 LOC4350166 CCR4-NOT transcription complex subunit 11 4350166 Os11g0240900 4.4 3.4
 5.4
 0.9
0.3
 4.1
 2.5
2.1
 0.1
0.0
 3.9
 0.7
0.4
 1.1
1.0
 1.3
 1.5
17 LOC4334099 uncharacterized LOC4334099 4334099 Os03g0747600 4.3 5.5
 3.2
 3.6
1.4
 3.3
1.5
 5.9
1.7
 3.8
3.5
 4.7
3.7
 1.5
0.8
 2.3
2.1
 2.2
1.9
 4.5
3.0
18 LOC4325002 ubinuclein-1 4325002 Os01g0883200 4.3 4.3
 4.3
 2.0
1.1
 4.5
1.7
 3.9
2.7
 2.8
2.5
 3.2
 1.7
0.8
 2.1
0.9
 3.4
0.7
 2.2
1.4
19 LOC4342696 CTD small phosphatase-like protein 2 4342696 Os07g0207700 4.2 4.1
 4.3
 1.8
0.0
 1.2
 1.6
0.0
 2.0
0.3
 2.4
 0.6
-0.1
 1.7
0.8
 0.5
 3.3
20 LOC4337785 serine/threonine-protein phosphatase BSL1 homolog 4337785 OSNPB_050144400 4.2 4.5
 4.0
 1.5
 0.3
 2.4
0.5
 2.2
0.4
 1.4
 2.7
0.8
 1.3
1.0
 1.3
 1.1
21 LOC4341213 uncharacterized LOC4341213 4341213 Os06g0535300 4.2 5.5
 2.9
 1.9
1.6
 2.2
2.2
 3.9
3.6
 4.7
4.2
 4.9
3.1
 3.6
3.0
 1.9
1.8
 4.0
3.7
 3.9
2.3
22 LOC4332999 RNA helicase aquarius 4332999 Os03g0387000 4.2 5.0
 3.4
 1.7
 0.8
 3.8
3.7
 2.4
2.2
 2.8
 4.8
 3.5
 1.5
 2.2
23 LOC4327802 pre-mRNA-processing protein 40A 4327802 Os01g0532200 4.2 4.9
 3.5
 1.7
 1.6
 3.2
2.6
 1.2
1.0
 4.3
2.3
 3.0
1.4
 3.0
2.9
 1.9
-0.4
 2.8
2.6
24 LOC4345840 ubiquitin carboxyl-terminal hydrolase 17 4345840 Os08g0478566 4.2 5.7
 2.6
 1.8
0.9
 3.1
0.7
 4.5
3.8
 3.3
2.9
 2.5
 2.4
1.7
 2.3
2.2
 3.7
3.6
 4.0
3.3
25 LOC4344183 DDT domain-containing protein PTM 4344183 Os07g0661550 4.1 5.4
1.3
 3.0
 4.1
2.6
 4.0
2.9
 5.3
 1.5
1.3
 2.4
2.2
 2.9
 2.8
26 LOC4341311 uncharacterized LOC4341311 4341311 Os06g0562700 4.1 5.3
 2.9
 2.2
 4.4
 3.5
3.4
 1.8
1.2
 3.9
 2.0
 3.5
 3.2
 2.4
27 LOC4335928 regulator of nonsense transcripts UPF3 4335928 Os04g0440100 4.1 4.4
 3.7
 3.1
 4.1
 3.9
1.9
 1.9
1.5
 5.8
4.7
 2.1
1.9
 2.2
1.7
 2.2
2.1
 2.7
1.5
28 LOC4335478 FACT complex subunit SPT16-like 4335478 OSNPB_040321600 4.1 4.4
 3.8
 0.9
 4.8
 2.6
2.0
 2.4
1.2
 3.4
3.1
 3.2
3.0
 2.2
1.7
 3.1
0.6
 2.5
1.1
29 LOC9268967 uncharacterized LOC9268967 9268967 Os05g0117864 4.0 4.0
 4.0
 2.3
 3.2
 4.5
 4.9
 5.0
 2.7
1.9
 4.4
3.9
 3.4
 3.0
30 LOC4328210 structural maintenance of chromosomes protein 3 4328210 Os02g0133300 4.0 5.3
 2.7
 1.1
1.0
 1.0
 2.5
2.4
 2.6
0.5
 2.0
 0.6
 2.8
 2.5
 2.8
31 LOC4326280 auxilin-related protein 1 4326280 Os01g0355500 4.0 3.8
 4.3
 1.2
1.1
 2.9
2.5
 3.0
2.8
 3.8
2.3
 4.1
3.0
 2.8
2.7
 3.1
2.2
 3.1
1.0
 1.6
1.4
32 LOC4328058 ATP-dependent helicase BRM 4328058 Os02g0114033 4.0 3.7
 4.3
 3.4
 3.3
 2.5
2.3
 2.4
2.2
 4.3
 1.8
1.4
 3.4
3.3
 1.5
1.2
 3.1
1.6
33 LOC4324616 ubiquitin carboxyl-terminal hydrolase 13 4324616 Os01g0771400 4.0 4.7
 3.2
 2.1
1.4
 3.8
3.2
 4.6
4.2
 2.7
2.6
 3.8
3.6
 2.8
1.5
 3.7
2.9
 1.9
1.8
 3.0
2.7
34 LOC4330479 histone-lysine N-methyltransferase SUVR5 4330479 Os02g0708600 4.0 4.3
 3.7
 0.7
 2.6
 2.4
2.4
 1.8
1.3
 3.2
 3.9
3.3
 3.5
3.0
 2.1
 2.9
35 LOC4332044 hornerin 4332044 Os03g0213300 3.9 4.3
 3.5
 2.1
0.7
 4.2
1.9
 4.7
4.3
 4.5
3.9
 4.3
3.4
 4.1
1.2
 3.1
3.0
 3.4
3.1
 2.7
1.8
36 LOC4334470 DDT domain-containing protein DDR4 4334470 Os03g0802800 3.9 5.4
 2.5
 3.4
3.3
 4.1
 3.9
3.4
 1.3
1.1
 3.5
 4.3
1.4
 2.5
1.3
 0.0
 1.9
37 LOC4327886 TNF receptor-associated factor homolog 1a 4327886 Os01g0775300 3.9 4.5
 3.3
 1.7







38 LOC4333737 E3 ubiquitin-protein ligase UPL7 4333737 Os03g0683900 3.9 2.8
 5.0
 0.9
 2.9
 0.7
-0.0
 -0.4
-0.5
 2.5
 0.4
 0.7
 2.0
 1.4
39 LOC4326687 beta-adaptin-like protein A 4326687 Os01g0626200 3.9 2.8
 5.0
 1.6
 1.1
 1.4
0.1
 0.3
-0.2
 1.2
 2.3
 2.5
 3.2
 2.2
40 LOC4337825 probable chromatin-remodeling complex ATPase chain 4337825 Os05g0150300 3.9 3.6
 4.2
 1.5
0.5
 4.7
2.8
 4.5
4.4
 4.9
4.5
 3.9
2.7
 1.4
1.4
 4.3
3.6
 3.0
0.7
 2.0
1.4
41 LOC4328238 probable histone acetyltransferase HAC-like 1 4328238 Os02g0137450 3.9 3.9
 3.9
 1.7
 3.4
1.4
 3.8
3.7
 5.1
3.8
 3.6
3.4
 2.2
1.3
 3.6
2.6
 2.8
 1.9
42 LOC4325055 transcription initiation factor TFIID subunit 12 4325055 Os01g0858500 3.9 2.4
 5.3
 1.4
 1.4
 2.1
0.9
 2.4
0.8
 1.1
 1.8
 1.2
 0.8
 2.0
43 LOC4349005 uncharacterized LOC4349005 4349005 Os10g0497000 3.8 6.8
 0.9
 1.4
 4.1
2.9
 4.4
4.2
 4.6
4.5
 4.8
 2.5
1.8
 4.0
2.4
 3.0
 2.3
44 LOC4345630 uncharacterized LOC4345630 4345630 Os08g0430000 3.8 3.5
 4.2
 2.4







45 LOC4334396 casein kinase 1-like protein HD16 4334396 OSNPB_030793500 3.8 1.8
 5.8
 2.7
1.9
 5.7
4.3
 6.7
6.2
 8.2
5.1
 5.4
3.5
 2.7
1.5
 3.0
2.7
 3.2
3.2
 3.0
2.4
46 LOC4352229 cyclin-T1-4-like 4352229 OSNPB_120485400 3.8 4.3
 3.3
 4.1
1.5
 5.4
3.5
 4.4
3.1
 3.0
1.9
 4.1
 2.7
1.8
 3.9
2.4
 3.1
0.6
 2.3
1.9
47 LOC4343217 protein CTR9 homolog 4343217 Os07g0476200 3.8 4.4
 3.2
 2.8
 1.9
 3.1
2.9
 3.4
3.0
 3.2
 1.9
 4.3
 3.5
 2.3
48 LOC4333889 probable serine/threonine protein kinase IREH1 4333889 Os03g0711800 3.8 4.6
 3.0
 3.0
 2.0
1.8
 3.6
2.0
 3.1
2.6
 4.2
3.3
 2.7
1.1
 3.1
2.5
 3.5
 2.4
49 LOC4352775 uncharacterized LOC4352775 4352775 Os12g0612400

-0.2
 -0.7
-1.2
 2.3
2.1
 1.3
0.5
 2.3
 1.2
-1.2
 3.3
1.7
 1.8
 0.6
50 LOC4327229 protein DEK 4327229 Os01g0924900 3.8 3.8
 3.8








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