Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4346006   putative pentatricopeptide repeat-containing protein At3g05240 
 osa-r.5   4346006   putative pentatricopeptide repeat-containing protein At3g05240 
 osa-m.8   4346006   putative pentatricopeptide repeat-containing protein At3g05240 
 mtr-u.4   11405487   putative pentatricopeptide repeat-containing protein At3g05240 

close


Top 50 coexpressed genes to 4346006 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3013   Nucleocytoplasmic transport  1 109 -
 osa3018   RNA degradation  1 112 -

close


osa:LOC4346006 (putative pentatricopeptide repeat-containing protein At3g05240) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4346006
osa-r.5
for
4346006
osa-m.8
for
4346006
mtr-u.4
for
11405487
1 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 4.7 3.9
 5.4
 2.0
2 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 4.7 3.0
 6.3
3 LOC4339896 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4339896 Os06g0112000 4.2 3.6
 4.8
 2.7
-0.1
4 LOC4337840 pentatricopeptide repeat-containing protein At2g13600 4337840 Os05g0153400 4.1 4.1
 4.0
5 LOC9267687 pentatricopeptide repeat-containing protein At5g43790 9267687 Os12g0128200 3.8 4.0
 3.6
 2.6
6 LOC4339437 glucan endo-1,3-beta-glucosidase 8 4339437 Os05g0535100 3.7 3.3
 4.1
 0.6
-0.7
7 LOC4348029 uncharacterized LOC4348029 4348029 Os10g0128800 3.6 3.6
 3.6
8 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 3.6 3.4
 3.8
9 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600 3.6 2.0
 5.1
 2.2
10 LOC4334286 pentatricopeptide repeat-containing protein At2g22070 4334286 Os03g0775400 3.6 2.1
 5.0
11 LOC4339741 zinc finger BED domain-containing protein RICESLEEPER 3-like 4339741 OSNPB_050583200 3.5 3.6
 3.5
 2.1
1.6
12 LOC4339672 pentatricopeptide repeat-containing protein At5g39680 4339672 Os05g0572900 3.4 1.9
 5.0
 3.8
13 LOC4331821 tubulin--tyrosine ligase-like protein 12 4331821 Os03g0179000 3.4 4.1
 2.8
 1.0
14 LOC4340491 pentatricopeptide repeat-containing protein At3g29230 4340491 Os06g0216400 3.4 3.1
 3.7
15 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300 3.4 2.5
 4.2
 0.6
16 LOC4351584 pentatricopeptide repeat-containing protein At4g15720 4351584 Os12g0163600 3.4 2.7
 4.0
 3.4
17 LOC4327605 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 4327605 Os01g0819800 3.3 3.1
 3.6
 2.8
18 LOC4350437 short integuments 2, mitochondrial 4350437 Os11g0447300 3.3 3.3
 3.3
 1.8
19 LOC4334193 pentatricopeptide repeat-containing protein At1g77360, mitochondrial 4334193 Os03g0761300 3.3 2.0
 4.6
 0.8
20 LOC4334236 pentatricopeptide repeat-containing protein At5g46460, mitochondrial 4334236 Os03g0767700 3.3 2.3
 4.3
21 LOC4344519 exosome complex component RRP41-like 4344519 Os08g0116800 3.2 3.4
 3.1
 0.8
22 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 3.2 3.8
 2.7
23 LOC4348962 putative pentatricopeptide repeat-containing protein At5g52630 4348962 Os10g0488900 3.2 2.6
 3.8
24 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 3.2 2.2
 4.1
 3.6
25 LOC4330986 putative pentatricopeptide repeat-containing protein At4g17915 4330986 Os02g0793200 3.1 2.0
 4.3
 1.0
26 LOC4343927 homeobox-DDT domain protein RLT3 4343927 Os07g0619600 3.1 2.7
 3.5
 2.7
27 LOC4341594 nuclear intron maturase 4, mitochondrial 4341594 Os06g0634100 3.1 2.1
 4.1
 0.4
28 LOC4333891 zinc finger protein VAR3, chloroplastic 4333891 Os03g0712200 3.1 3.1
 3.0
 2.3
29 LOC4343805 pentatricopeptide repeat-containing protein At4g21705, mitochondrial 4343805 Os07g0598500 3.0 3.6
 2.4
 1.1
1.0
30 LOC4348019 putative FBD-associated F-box protein At1g78730 4348019 Os10g0126600 3.0 4.0
 2.0
31 LOC4352793 protein DETOXIFICATION 41 4352793 Os12g0615700 3.0 4.0
 1.9
32 LOC4348020 MEIOTIC F-BOX protein MOF-like 4348020 Os10g0126700 3.0 3.6
 2.4
33 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 3.0 1.6
 4.3
 2.8
1.9
34 LOC4333330 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4333330 Os03g0582100 2.9 2.7
 3.2
35 LOC4327598 putative pentatricopeptide repeat-containing protein At5g40405 4327598 Os01g0814300 2.9 1.8
 4.1
36 LOC4350065 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4350065 Os11g0213500 2.9 4.4
2.1
37 LOC4337804 pentatricopeptide repeat-containing protein At3g05340 4337804 Os05g0147600 2.9 2.0
 3.9
 2.0
38 LOC4340339 pentatricopeptide repeat-containing protein At2g03380, mitochondrial 4340339 Os06g0185700 2.9 4.1
2.7
39 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 2.9 1.9
 3.9
40 LOC4332118 nuclear pore complex protein NUP133 4332118 Os03g0225500 2.9 1.9
 3.8
 1.9
41 LOC4329384 U-box domain-containing protein 73-like 4329384 OSNPB_020490000 2.8 3.1
 2.6
42 LOC4351313 pentatricopeptide repeat-containing protein At4g18840 4351313 Os12g0114400 2.8 2.0
 3.7
43 LOC4327814 pentatricopeptide repeat-containing protein At3g16610 4327814 Os01g0977400 2.8 2.5
 3.1
 1.8
44 LOC9270751 putative disease resistance protein RGA1 9270751 Os01g0149350 2.8 3.5
 2.2
45 LOC107278606 pentatricopeptide repeat-containing protein At5g39350 107278606 Os02g0663900 2.8 3.9
3.1
46 LOC4327795 F-box only protein 7 4327795 Os01g0530500 2.8 1.7
 3.9
47 LOC107280019 putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial 107280019 2.7 3.8

48 LOC4329167 pentatricopeptide repeat-containing protein At1g09900 4329167 Os02g0321000 2.7 3.6
 1.8
 0.5
49 LOC4345851 pentatricopeptide repeat-containing protein At1g09410, mitochondrial 4345851 Os08g0481000 2.7 3.4
2.6
50 LOC4343346 ribosomal RNA small subunit methyltransferase, mitochondrial 4343346 Os07g0509600 2.7 1.8
 3.6
 1.9
The preparation time of this page was 1.3 [sec].