Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4346294   28 kDa ribonucleoprotein, chloroplastic 
 osa-r.5   4346294   28 kDa ribonucleoprotein, chloroplastic 
 osa-m.8   4346294   28 kDa ribonucleoprotein, chloroplastic 
 osa-u.4   4347871   28 kDa ribonucleoprotein, chloroplastic 
 ath-u.4   CP31B   chloroplast RNA-binding protein 31B 
 ath-u.4   RBP31   31-kDa RNA binding protein 
 gma-u.4   100790280   31 kDa ribonucleoprotein, chloroplastic-like 
 gma-u.4   100810381   RNA recognition motif (RRM) domain-containing protein 
 gma-u.4   100811487   RNA recognition motif-containing protein 
 sly-u.4   101250878   28 kDa ribonucleoprotein, chloroplastic 
 ppo-u.4   7484435   28 kDa ribonucleoprotein, chloroplastic 
 ppo-u.4   7467664   28 kDa ribonucleoprotein, chloroplastic 
 ppo-u.4   7457790   28 kDa ribonucleoprotein, chloroplastic 
 mtr-u.4   25489530   28 kDa ribonucleoprotein, chloroplastic 
 mtr-u.4   25493685   28 kDa ribonucleoprotein, chloroplastic 

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Top 50 coexpressed genes to 4346294 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  10 336 8.76
 osa3060   Protein export  2 49 2.32
 osa195   Photosynthesis  1 77 -
 osa3018   RNA degradation  2 112 -
 osa3015   mRNA surveillance pathway  1 115 -

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osa:LOC4346294 (28 kDa ribonucleoprotein, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4346294
osa-r.5
for
4346294
osa-m.8
for
4346294
osa-u.4
for
4347871
ath-u.4
for
CP31B
ath-u.4
for
RBP31
gma-u.4
for
100790280
gma-u.4
for
100810381
gma-u.4
for
100811487
sly-u.4
for
101250878
ppo-u.4
for
7484435
ppo-u.4
for
7467664
ppo-u.4
for
7457790
mtr-u.4
for
25489530
mtr-u.4
for
25493685
1 LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like 4326614 OSNPB_010618400 8.0 6.1
 9.8
 3.8
0.3
 2.1
0.8
 3.8
0.6
 5.4
5.1
 5.1
4.2
 4.6
3.1
 3.2
 5.6
2.9
 0.1
-2.1
 4.7
2.3
 3.7
3.4
 3.6
0.3
2 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 7.5 7.2
 7.7
 3.0
 5.1
 3.6
 5.7
5.0
 6.6
5.9
 5.6
4.0
 7.2
 4.0
 1.6
 5.0
 4.8
 4.7
3 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 7.2 7.8
 6.5
 2.8
 7.9
 7.8
 7.2
5.4
 7.4
4.7
 8.0
5.1
7.9
 1.9
 7.9
 2.5
 5.8
4 LOC4350988 GTPase Der 4350988 Os11g0638000 7.0 6.2
 7.9
 3.5
 4.1
 5.4
 4.7
 4.7
 5.0
 4.0
 2.6
 1.2
 3.5
 1.5
 2.1
5 LOC4342438 RNA-binding protein CP33, chloroplastic 4342438 Os07g0158300 7.0 6.3
 7.8
 5.3
 7.3
 7.5
 6.3
4.9
 5.0
4.8
 5.9
4.3
 4.8
 7.8
4.6
 2.1
1.2
 6.6
4.6
 2.3
1.7
 3.9
2.8
6 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 7.0 5.9
 8.0
 3.6
 5.7
 9.2
 3.6
 3.9
 6.3
 5.5
 2.8
 -0.0
 2.7
 1.2
 5.2
7 LOC4328072 uncharacterized LOC4328072 4328072 Os02g0115600 7.0 6.0
 7.9
 2.3
 4.7
 4.3
 5.9
 5.8
 3.6
 5.3
 3.4
 -0.7
 3.8
 0.5
 1.5
8 LOC4349098 uncharacterized LOC4349098 4349098 Os10g0512500 6.9 7.2
 6.6
 2.5
 6.6
 7.2
 4.4
 5.7
 5.1
 7.5
 4.5
 3.2
 4.6
 3.3
 2.4
9 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 6.8 5.0
 8.6
 4.4
 4.5
 9.9
 7.2
6.7
 5.9
5.8
 7.9
7.5
 9.0
 6.6
 0.8
 7.1
 1.8
 4.0
10 LOC4332348 50S ribosomal protein L4, chloroplastic 4332348 Os03g0265400 6.7 5.9
 7.5
 3.6
 4.2
 15.6
 7.3
5.6
 8.1
6.3
 7.4
5.9
 10.9
 7.2
 0.4
 3.8
 3.2
 4.2
11 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 6.6 6.4
 6.8
 4.5
 4.8
 5.4
 3.5
3.1
 5.1
3.0
 4.4
3.6
 4.6
 3.8
0.7
 1.0
0.5
 4.1
1.2
 0.8
 3.6
12 LOC4325387 cell division protein FtsY homolog, chloroplastic 4325387 Os01g0958100 6.6 6.6
 6.6
 4.0
 4.9
 3.5
 2.0
 1.8
 1.9
 7.3
 1.9
 1.8
 2.8
 1.6
 1.3
13 LOC4331815 ylmG homolog protein 2, chloroplastic 4331815 Os03g0178200 6.6 5.7
 7.4
 5.2
 3.6
 5.7
 5.6
4.8
 4.4
4.3
 6.2
4.9
 5.1
 2.7
 0.2
 2.3
 3.9
 2.2
14 LOC4348745 rubisco accumulation factor 1, chloroplastic-like 4348745 OSNPB_100445600 6.5 6.7
 6.3
 2.7
 5.6
5.0
 4.2
3.3
 5.8
 5.8
 6.7
 6.8
 8.4
 2.1
 6.3
 2.1
 3.6
15 LOC4325168 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 4325168 Os01g0271400 6.4 5.8
 7.1
 3.7
 2.9
 3.3
 7.1
4.7
 5.2
5.1
 5.7
5.0
 4.6
 3.2
 1.8
 2.4
 4.8
 3.0
16 LOC4347871 28 kDa ribonucleoprotein, chloroplastic 4347871 Os09g0565200 6.3 5.5
 7.1
 6.3
 4.4
 4.4
 12.6
9.7
 12.6
7.9
 13.2
9.7
12.6
1.7
 2.3
1.7
 12.6
2.3
 4.0
 4.0
17 LOC4348816 tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 4348816 Os10g0461100 6.3 6.2
 6.3
 3.2
 7.1
 4.7
 6.3
5.2
 5.8
5.1
 4.3
3.9
 5.9
 1.8
1.1
 2.7
2.4
 2.4
2.2
 3.2
 2.0
18 LOC4338877 DAR GTPase 3, chloroplastic 4338877 Os05g0430400 6.3 6.4
 6.2
 3.4
 5.4
 4.5
 6.4
1.8
 6.4
1.0
 4.5
0.3
 3.3
 1.5
 2.4
 2.8
 1.5
 2.8
19 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 6.1 5.3
 7.0
 3.7
1.0
 3.8
1.5
 6.7
0.8
 5.9
4.8
 4.9
3.4
 5.4
4.0
 6.3
1.5
 4.0
3.8
 1.4
0.7
 6.4
5.2
 6.8
1.8
 5.1
2.2
20 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 6.1 6.8
 5.5
 3.7
 3.9
 13.3
 6.2
 5.2
 7.6
 8.0
6.8
 5.0
3.9
 2.9
0.7
 4.7
4.2
 3.9
 6.3
21 LOC4325344 DEAD-box ATP-dependent RNA helicase 39-like 4325344 OSNPB_010184500 6.1 5.4
 6.7
 3.3
 3.4
 2.6
 5.5
 8.2
 5.0
 6.0
 3.1
 -0.3
 3.9
 3.1
 2.5
22 LOC4340846 trigger factor-like protein TIG, Chloroplastic 4340846 Os06g0308000 6.0 5.2
 6.9
 3.4
 7.5
 6.3
 4.2
3.6
 4.1
3.8
 5.0
4.2
 9.4
 3.1
 0.6
 2.8
 2.5
 4.4
23 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 6.0 5.4
 6.6
 2.8
 5.4
 12.4
 5.2
4.9
 3.7
3.6
 6.9
6.6
 8.7
 5.4
 1.0
 5.6
 3.7
 4.9
24 LOC4338667 50S ribosomal protein L1, chloroplastic 4338667 Os05g0388500 6.0 5.8
 6.1
 4.8
 4.5
 11.3
 4.1
2.4
 5.1
2.8
 5.9
3.8
 7.6
 4.3
4.0
 0.9
0.5
 4.8
3.4
 1.8
 2.7
25 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 6.0 5.3
 6.6
 3.7
2.1
 4.1
 3.5
 5.8
5.7
 5.7
5.2
 6.2
6.1
 6.4
 5.6
3.2
 1.2
0.1
 4.3
3.3
 2.8
 3.7
26 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 5.9 6.5
 5.3
 4.2
2.2
 4.2
3.3
 8.4
5.6
 7.9
7.3
 5.3
5.1
 9.2
6.3
 7.6
7.3
 9.9
6.3
 2.0
0.5
 9.1
4.3
 4.0
 5.8
27 LOC4326517 uncharacterized LOC4326517 4326517 Os01g0940600 5.9 6.0
 5.7
 2.3
 0.9
 2.8
 4.7
 4.0
 5.5
 4.0
 4.9
 2.5
 5.3
 2.1
 3.4
28 LOC4341108 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic 4341108 Os06g0498900 5.8 4.8
 6.9
 3.7
 3.7
 3.1
 5.1
 5.9
 3.8
 3.5
 3.2
 2.4
 4.9
 4.5
 2.7
29 LOC4331942 30S ribosomal protein S10, chloroplastic 4331942 Os03g0196800 5.8 5.2
 6.4
 3.7










30 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 5.8 6.0
 5.6
 3.1
 5.0
 11.2
 6.1
5.0
 6.3
3.7
 6.1
5.5
 8.2
 4.9
 1.2
 4.1
 2.8
 5.1
31 LOC4332087 DEAD-box ATP-dependent RNA helicase 47B-like 4332087 OSNPB_030219700 5.8 5.7
 5.9
 1.4
0.8
 4.5
 4.8
 6.9
4.1
 6.3
3.3
 5.5
2.9
 5.3
 4.1
 1.4
 2.5
 2.7
 3.5
32 LOC4339922 superoxide dismutase [Fe] 1, chloroplastic-like 4339922 OSNPB_060115400 5.7 5.1
 6.4
 2.5
 5.5
0.5
 4.3
1.3
 6.3
3.6
 6.0
4.0
 4.5
2.2
 3.5
2.5
 1.2
0.1
 1.5
1.4
 2.2
-0.0
 1.7
 -0.1
33 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 5.7 5.8
 5.6
 4.5
 4.1
0.7
 3.6
0.8
 6.1
 5.2
 7.1
 4.8
2.8
 5.2
3.4
 3.8
1.9
 6.6
6.2
 1.5
 4.8
34 LOC4330582 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 4330582 Os02g0725200 5.7 4.8
 6.6
 3.7
 4.7
 2.9
 3.1
 2.6
 4.4
 5.1
 3.4
 0.7
 3.6
 1.2
 2.1
35 LOC4332730 uncharacterized LOC4332730 4332730 Os03g0331600 5.7 6.0
 5.5
 4.1
 5.3
 5.5
 6.9
5.2
 4.9
4.6
 7.9
6.8
 4.0
 3.8
 0.9
 5.0
 2.7
 4.6
36 LOC4345097 preprotein translocase subunit SECY, chloroplastic-like 4345097 OSNPB_080254500 5.6 5.0
 6.2
 2.9
 3.9
 4.6
 5.0
 3.7
 3.9
 4.9
 1.5
0.9
 0.7
0.5
 1.5
1.5
 3.6
 4.3
37 LOC4334649 DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like 4334649 OSNPB_030827700 5.6 4.7
 6.5
 4.7
 4.4
 5.3
 7.7
5.7
 7.3
6.6
 6.9
6.2
 11.1
 6.3
6.0
 1.8
0.3
 4.7
3.6
 4.4
 4.1
38 LOC4329578 2-Cys peroxiredoxin BAS1, chloroplastic-like 4329578 OSNPB_020537700 5.6 5.4
 5.8
 7.5
 3.2
2.8
 7.3
6.4
 5.9
5.6
 5.2
4.4
 7.3
7.0
 8.6
3.1
 4.6
3.8
 1.9
1.2
 4.2
2.3
 3.6
2.5
 5.2
4.8
39 LOC4334445 probable GTP-binding protein OBGC2 4334445 OSNPB_030799700 5.6 5.1
 6.1
 6.2

3.5
1.8
 4.9
2.4
 3.4
1.8
 5.4
 2.7
 1.4
 2.1
 3.4
 3.3
40 LOC4327627 protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic-like 4327627 OSNPB_010798500 5.6 4.2
 6.9
 3.8
 4.9
 3.0
 4.5
3.7
 5.4
3.3
 5.0
4.6
 2.5
 2.8
 1.5
 2.9
 2.4
 4.1
41 LOC4332652 30S ribosomal protein S1, chloroplastic 4332652 Os03g0315800 5.6 5.7
 5.4
 3.2
 6.1
 9.9
 6.0
5.5
 5.2
5.0
 5.6
5.5
 10.9
2.6
 6.0
4.8
 2.0
2.0
 6.6
4.7
 3.8
 7.4
42 LOC4342497 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 4342497 OSNPB_070168000 5.5 4.8
 6.2
 3.8
 4.7
 3.7
 3.8
 5.1
 3.9
 4.3
 3.6
1.0
 0.1
-0.5
 3.9
0.7
 4.0
 4.2
43 LOC4346032 transcription termination factor MTERF6, chloroplastic/mitochondrial 4346032 Os08g0515800 5.5 5.5
 5.5
 3.0
 2.2
 5.1
 6.9
4.8
 5.1
4.3
 2.8
2.4
 3.8
 2.4
 2.8
 3.1
 2.1
 1.7
44 LOC4345271 ribonuclease E/G-like protein, chloroplastic 4345271 Os08g0323600 5.5 5.9
 5.1
 2.0
 0.4
 2.3
 4.0
3.8
 4.1
3.8
 3.0
2.9
 6.2
 2.9
 1.5
 3.4
 3.0
 3.1
45 LOC4333848 30S ribosomal protein S13, chloroplastic 4333848 Os03g0704000 5.5 5.3
 5.7
 2.5
 5.6
 10.4
 4.3
3.9
 3.4
2.9
 6.0
5.5
 7.7
 5.8
3.5
 1.8
1.4
 7.3
2.5
 0.7
 4.2
46 LOC9270258 protease Do-like 2, chloroplastic 9270258 Os05g0147500 5.5 5.9
 5.0
 3.3
 3.6
 6.5
 6.9
5.3
 6.1
5.7
 5.7
3.5
 5.9
3.1
 3.8
1.1
 -0.1
-0.6
 3.6
0.8
 1.6
 3.6
47 LOC4344522 28 kDa ribonucleoprotein, chloroplastic 4344522 Os08g0117100 5.4 5.4
 5.4
 5.6
 5.6
 5.4
 5.0
2.3
 4.5
3.0
 4.9
2.3
6.7
 3.3
 7.5

48 LOC4343349 methionine aminopeptidase 1B, chloroplastic 4343349 Os07g0510100 5.4 5.4
 5.4
 4.7
4.2
 5.7
 3.7
 5.2
3.9
 6.1
5.0
 2.9
2.8
 3.7
 3.6
 0.5
 2.7
 1.4
 3.0
49 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 5.4 5.7
 5.1
 2.9
 4.3
 11.8
 6.8
 4.7
 6.5
 9.2
 5.2
1.2
 1.6
0.4
 4.4
1.2
 2.1
 5.6
50 LOC4331339 DEAD-box ATP-dependent RNA helicase 50-like 4331339 OSNPB_030108600 5.4 4.6
 6.1
 1.2
 3.1
 4.9
 5.5
4.7
 5.7
4.9
 4.0
3.5
 5.4
 3.4
 0.7
 3.1
 3.0
 1.6
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