Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4346410   CBS domain-containing protein CBSX1, chloroplastic 
 osa-r.5   4346410   CBS domain-containing protein CBSX1, chloroplastic 
 osa-m.8   4346410   CBS domain-containing protein CBSX1, chloroplastic 
 osa-u.4   4345241   CBS domain-containing protein CBSX1, chloroplastic 
 ath-u.4   LEJ1   Cystathionine beta-synthase (CBS) family protein 
 ath-u.4   LEJ2   Cystathionine beta-synthase (CBS) family protein 
 gma-u.4   100781400   CBS domain-containing protein CBSX1, chloroplastic-like 
 gma-u.4   100814621   CBS domain-containing protein CBSX1, chloroplastic 
 gma-u.4   100802500   CBS domain-containing protein CBSX1, chloroplastic 
 sly-u.4   101267675   CBS domain-containing protein CBSX1, chloroplastic 
 sly-u.4   101259199   CBS domain-containing protein CBSX1, chloroplastic 
 sly-u.4   101268047   CBS domain-containing protein CBSX1, chloroplastic 
 ppo-u.4   7489745   CBS domain-containing protein CBSX1, chloroplastic 
 ppo-u.4   7457545   CBS domain-containing protein CBSX2, chloroplastic 
 ppo-u.4   7465031   CBS domain-containing protein CBSX2, chloroplastic 
 mtr-u.4   25494455   CBS domain-containing protein CBSX1, chloroplastic 
 mtr-u.4   11410895   CBS domain-containing protein CBSX1, chloroplastic 

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Top 50 coexpressed genes to 4346410 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa1232   Nucleotide metabolism  2 80 -
 osa561   Glycerolipid metabolism  2 84 -
 osa564   Glycerophospholipid metabolism  2 120 -
 osa1240   Biosynthesis of cofactors  2 248 -
 osa4075   Plant hormone signal transduction  3 262 -

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osa:LOC4346410 (CBS domain-containing protein CBSX1, chloroplastic) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4346410
osa-r.5
for
4346410
osa-m.8
for
4346410
osa-u.4
for
4345241
ath-u.4
for
LEJ1
ath-u.4
for
LEJ2
gma-u.4
for
100781400
gma-u.4
for
100814621
gma-u.4
for
100802500
sly-u.4
for
101267675
sly-u.4
for
101259199
sly-u.4
for
101268047
ppo-u.4
for
7489745
ppo-u.4
for
7457545
ppo-u.4
for
7465031
mtr-u.4
for
25494455
mtr-u.4
for
11410895
1 LOC4340113 iron-sulfur assembly protein IscA, chloroplastic 4340113 Os06g0146400 4.3 4.3
 4.3
 3.5
 3.9
 -0.1
 2.2
1.8
 1.8
0.8
 1.6
0.6
 3.9
 1.1
 5.1
 1.1
0.9
 1.2
0.2
 0.5
0.1
 2.2
 7.7
2 LOC4330592 protein TIC 20-v, chloroplastic 4330592 Os02g0726600 4.3 3.5
 5.1
 3.7
 3.2
 0.1
 1.1
0.9
 0.7
0.7
 6.0
1.7
 4.4
 0.0
 3.2
 3.0
 -0.3
 0.9
 -0.5
 2.2
3 LOC4325586 probable choline kinase 2 4325586 Os01g0717000 4.3 5.3
 3.2
 1.2
0.5
 2.6
0.7
 1.4
-0.9
 1.6
0.8
 1.8
1.1
 1.7
1.1
 0.5
 2.0
 -0.7
 1.0
-0.4
 1.7
0.4
 1.6
0.6
 2.5
1.7
 1.7
-0.8
4 LOC4343960 UMP-CMP kinase 3-like 4343960 OSNPB_070624700 4.2 4.2
 4.2
 1.1
1.0
 1.4
0.1
 1.1
-0.8
 3.6
2.9
 4.8
3.3
 0.2
-0.5
 1.5
-0.2
 1.5
-0.2
 1.0
-2.3
 -1.0
-1.7
 1.6
0.2
 2.0
0.8
 1.7
 -0.1
5 LOC4340988 pheophytinase, chloroplastic 4340988 Os06g0354700 4.2 3.8
 4.6
 1.6
 1.9
 1.3
 1.1
0.3
 1.4
0.0
 1.6
1.4
 1.5
 2.6
 0.7
 1.1
 1.1
 4.8
 3.3
 1.0
6 LOC4329977 UDP-rhamnose/UDP-galactose transporter 5 4329977 Os02g0614500 4.2 4.0
 4.3
 1.8
1.4
 1.3
0.1
 1.1
1.1
 2.1
1.0
 2.5
1.7
 -0.3
-0.4
 -0.8
-1.0
 2.4
0.4
 -0.4
-1.0
 0.4
-0.0
 1.9
0.2
 1.5
1.3
 1.9
0.1
 1.8
-0.5
7 LOC4332478 probable sugar phosphate/phosphate translocator At3g11320 4332478 Os03g0286300 4.2 4.0
 4.3
 0.7
 2.2
1.3
 -0.9
-1.3
 3.0
1.1
 3.2
1.0
 2.0
1.7
 -0.3
 3.3
 -1.0
 -0.8
-1.1
 0.7
-0.3
 1.5
0.6
 0.6
-0.5
 0.2
-0.6
8 LOC4337358 probable adenylate kinase 6, chloroplastic 4337358 OSNPB_040671100 4.1 3.9
 4.2
 0.9
0.1
 0.8
0.5
 1.5
0.5
 2.5
2.4
 2.9
2.5
 2.7
2.1
 -0.0
-0.8
 0.1
0.1
 0.8
-2.4
 0.0
-0.3
 0.2
0.1
 1.5
1.4
 3.3
1.4
 2.3
1.4
9 LOC4330071 ATP-dependent Clp protease proteolytic subunit 4330071 Os02g0634500 4.0 4.7
 3.2
 3.9












10 LOC4328207 cyclin-T1-1 4328207 OSNPB_020133000 3.9 3.9
 4.0
 1.5
 1.2
 -0.2


0.5
 1.4
 -0.4
 -1.1
 1.7
 1.4

11 LOC4331483 K(+) efflux antiporter 5 4331483 Os03g0127950 3.8 3.6
 4.1
 1.7
 1.4
 -1.5
 0.8
0.2
 1.0
0.6
 -1.0
-1.1
 -0.7
 2.2
 -0.5
 0.7
-0.6
 0.5
0.5
 0.9
0.4
 -0.1
 0.1
12 LOC4324136 protein translation factor SUI1 homolog 4324136 Os01g0794500 3.8 4.5
 3.0













13 LOC4326838 neutral/alkaline invertase 1, mitochondrial-like 4326838 Os01g0332100 3.7 4.9
 2.6
 0.8
0.5
 1.9
0.9
 0.0
-1.3
 1.3
1.3
 1.1
0.1
 2.0
0.8
 0.7
-0.2
 1.4
1.0
 -0.2
-1.2
 1.3
0.2
 0.8
0.2
 0.1
-0.4
 2.0
0.4
 1.3
-1.1
14 LOC4333065 protein TIFY 10a-like 4333065 OSNPB_030402800 3.6 3.8
 3.4
 1.6
0.9
 1.3
1.0
 0.8
0.1
 1.3
1.0
 0.6
0.2
 0.2
-0.2
 2.0
1.5
 3.3
1.8
 0.7
0.7
 -0.7
-0.9
 1.1
0.9
 0.8
0.6
 2.6
1.4
 0.3
0.1
15 LOC4343210 uncharacterized LOC4343210 4343210 Os07g0474600 3.6 3.6
 3.6
 0.0
-0.3
 1.6
0.3
 -0.8
-1.2
 1.9
1.0
 0.4
0.3
 -0.7
-1.1
 0.3
-0.3
 0.1
-0.3
 0.6
0.1
 0.2
0.1
 0.2
-1.1
 1.0
0.5
 -0.8
 0.9
16 LOC4343418 glucose-6-phosphate/phosphate translocator 2, chloroplastic 4343418 Os07g0523400 3.6 4.7
 2.5
 -0.1
-0.1
 2.2
-0.2
 1.6
0.5
 1.6
0.3
 1.5
1.5
 0.3
0.2
 0.7
0.7
 1.4
-0.1
 0.7
0.4
 -0.1
-0.6
 1.5
1.3
 2.9
0.8
 1.7
-0.1
 0.3
0.0
17 LOC4346508 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like 4346508 OSNPB_090249900 3.6 4.0
 3.1
 2.3
 3.6
 0.1
 -0.9
-1.2
 -1.4
-1.4
 1.7
0.9
 4.8
 0.7
 3.0
 0.9
 -0.7
 -0.3
 0.7
 2.3
18 LOC4338756 uncharacterized LOC4338756 4338756 Os05g0406100 3.5 4.5
 2.5
 0.5
-0.1
 0.0
 -1.3
 1.5
-0.6
 1.1
-1.7
 1.6
0.3
 0.7
-1.0
 0.1
-0.2
 1.1
0.9
 -1.6
 1.2
 0.8
 0.1
-0.3
 -1.0
-1.0
19 LOC4331045 probable monogalactosyldiacylglycerol synthase 3, chloroplastic 4331045 OSNPB_020802700 3.5 4.7
 2.2
 1.2
-0.2
 0.1
-0.1
 0.5
-0.7
 -0.1
-0.6
 0.7
0.1
 0.2
-0.6
 0.9
-0.3
 1.1
-0.4
 1.2
-0.0
 0.5
-0.3
 1.5
-0.6
 0.2
-0.2
 -0.3
 -0.2
20 LOC4343744 cysteine-rich and transmembrane domain-containing protein WIH2 4343744 Os07g0585500 3.5 4.4
 2.5













21 LOC4339216 protein translation factor SUI1 homolog 4339216 Os05g0498400 3.4 3.6
 3.2
 1.6
-1.6
 2.7
1.8
 0.7
0.3
 1.7
1.3
 1.1
1.0
 1.9
0.9
 1.1
0.4
 1.8
1.6
 1.0
-0.4
 1.2
1.1
 1.6
1.2
 1.0
0.5
 2.5
1.1
 2.1
1.5
22 LOC4334299 uncharacterized LOC4334299 4334299 Os03g0778000 3.4 4.0
 2.7
 1.1












23 LOC4337359 probable polyamine oxidase 2 4337359 Os04g0671200 3.4 5.5
 1.2
 2.6
1.0
 1.0
 -0.0
 2.9
1.6
 3.0
1.3
 0.8
0.6
 1.6
1.3
 1.5
0.0
 1.8
0.8
 0.1
-0.6
 1.2
0.9
 1.8
0.1
 1.7
 0.6
24 LOC4336640 uncharacterized LOC4336640 4336640 Os04g0558700 3.4 3.4
 3.3
 0.9












25 LOC4341796 ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like 4341796 OSNPB_060669400 3.3 3.4
 3.2
 3.8
-0.7
 2.8
0.8
 0.5
-1.5
 0.8
0.1
 1.2
1.0
 2.5
1.3
 2.2
1.5
 1.4
1.1
 3.7
1.2
 2.1
0.0
 1.0
-0.5
 1.2
-0.3
 1.2
0.1
 2.0
1.2
26 LOC4346061 probable mitochondrial adenine nucleotide transporter BTL1 4346061 Os08g0520000 3.3 4.1
 2.5
 1.2
0.9
 1.6
 -0.7
 -0.4
-0.8
 -0.6
-1.0
 2.5
2.3
 0.1
 -0.2
 0.0
 1.5
 -0.5
 -0.5
 -1.1
 1.0
27 LOC107276568 glucose-6-phosphate/phosphate translocator 2, chloroplastic 107276568 Os07g0523600 3.3 4.4
-0.1
-0.1
 2.2
-0.2
 1.6
0.5
 1.6
0.3
 1.5
1.5
 0.3
0.2
 0.7
0.7
 1.4
-0.1
 0.7
0.4
 -0.1
-0.6
 1.5
1.3
 2.9
0.8
 1.7
-0.1
 0.3
0.0
28 LOC107276572 glucose-6-phosphate/phosphate translocator 2, chloroplastic 107276572 Os07g0523965 3.3 4.4
-0.1
-0.1
 2.2
-0.2
 1.6
0.5
 1.6
0.3
 1.5
1.5
 0.3
0.2
 0.7
0.7
 1.4
-0.1
 0.7
0.4
 -0.1
-0.6
 1.5
1.3
 2.9
0.8
 1.7
-0.1
 0.3
0.0
29 LOC4343944 serine/threonine-protein kinase SAPK2-like 4343944 OSNPB_070622000 3.3 3.9
 2.7
 1.4
0.9
 1.3
1.1
 1.7
0.5
 2.9
2.8
 4.1
2.1
 0.9
0.5
 1.2
0.9
 2.1
0.6
 0.7
0.4
 1.2
0.8
 1.2
1.0
 1.5
1.3
 2.0
1.6
 0.9
0.5
30 LOC4330181 GTP-binding protein YPTM2 4330181 Os02g0653800 3.3 4.3
 2.3
 0.6
0.4
 2.6
1.9
 1.0
0.1
 2.1
2.0
 3.0
2.8
 0.6
0.6
 1.8
1.5
 5.6
2.8
 1.2
0.2
 0.2
0.2
 1.4
0.9
 2.7
2.6
 2.5
2.4
 1.9
1.5
31 LOC4330961 diacylglycerol kinase 7 4330961 Os02g0787800 3.3 4.7
 1.9
 1.8
-0.1
 1.8
1.8
 1.2
-2.2
 1.7
0.7
 1.6
0.4
 -0.8
-0.8
 1.3
0.1
 5.2
-0.5
 1.0
-0.9
 1.5
-0.7
 0.9
0.2
 2.0
-0.8
 1.5
-0.5
 -0.4
-1.4
32 LOC4327687 mitochondrial carrier protein CoAc1 4327687 Os01g0708900 3.2 2.3
 4.2
 0.9
-0.0
 0.5
 -0.3
 3.7
2.1
 3.1
0.2
 1.5
0.5
 0.2
 1.2
 -1.4
 0.5
 1.1
 0.7
 2.1
 -1.8
33 LOC4329520 chaperone protein ClpD1, chloroplastic-like 4329520 OSNPB_020526400 3.2 3.2
 3.3
 2.1
0.6
 2.5
 1.6
 3.3
2.9
 4.5
4.4
 1.7
1.2
 2.9
 4.5
 1.0
 1.3
-0.1
 1.9
1.8
 2.0
1.7
 2.5
 0.9
34 LOC4348008 uncharacterized LOC4348008 4348008 Os10g0124100 3.2 4.2
 2.3
 1.1
0.2












35 LOC4326666 CTD small phosphatase-like protein 2 4326666 Os01g0629400 3.2 3.6
 2.7
 1.9
 0.4
-0.3
 0.1
-1.0
 1.6
0.2
 1.1
0.5
 -1.3
-1.5
 -0.4
 0.6
 0.1
 1.7
0.1
 1.9
-0.5
 1.9
0.1
 2.8
 -1.0
36 LOC4346474 zinc finger protein CO3-like 4346474 Os09g0240350 3.1 2.5
 3.8
 0.9
-0.1
 -0.8
 -0.1
 -0.3
-1.0
 -1.8
-2.2
 -0.1
-0.6
 1.3
1.0
 2.1
1.9
 0.5
-0.2
 1.7
1.3
 -0.9
-1.0
 0.1
-0.6
 0.8
 -0.2
37 LOC4346845 uncharacterized LOC4346845 4346845 Os09g0360400 3.1 4.1
 2.1
 0.7
0.1
 -0.5
 0.0
 1.6
0.9
 1.4
1.2
 1.3
1.2
 1.9
0.2
 2.2
1.6
 1.3
-0.5
 1.6
0.2
 0.7
0.1
 1.1
0.3
 0.3
0.2
 1.4
0.6
38 LOC4336494 salutaridine reductase 4336494 Os04g0531900 3.1 3.4
 2.8
 2.5
2.0
 0.9
-0.6
 2.0
0.5
 1.0
0.4
 0.7
0.3
 0.9
0.3
 1.4
0.6
 1.2
-0.5
 1.5
-0.1
 1.1
0.8
 0.7
0.4
 1.6
0.4
 2.2
1.1
 1.4
1.2
39 LOC4336255 uncharacterized LOC4336255 4336255 Os04g0492400 3.1 3.2
 3.0
 0.7
0.2
 1.2
 -0.0
 0.7
-0.1
 1.0
-0.7
 -0.4
-0.7
 0.9
 1.0
 -0.2
 1.0
-0.4
 1.6
1.2
 0.6
0.3
 4.8
 0.5
40 LOC4325023 exocyst complex component EXO70H1 4325023 Os01g0905200 3.1 3.8
 2.5
 0.4
-0.5












41 LOC4333106 ACT domain-containing protein ACR4 4333106 Os03g0413100 3.1 4.8
 1.5
 1.4
0.9
 0.5
-0.8
 0.2
-0.3
 1.3
-0.5
 0.7
0.1
 1.6
0.6
 0.8
0.2
 0.3
-0.7
 1.2
-0.4
 1.3
-0.2
 1.7
0.8
 1.5
1.4
 2.0
-0.4
 0.1
-1.8
42 LOC4352335 polyol transporter 5 4352335 Os12g0514000 3.1 3.1
 3.1
 2.2












43 LOC4329836 uncharacterized LOC4329836 4329836 Os02g0592400 3.1 3.6
 2.6
 1.1
-1.3
 1.1
 1.4
 1.6
0.4
 1.6
1.0
 -0.8
-1.1
 1.9
-1.7
 2.1
-0.1
 -0.9
-1.6
 0.1
-0.8
 1.1
-0.2
 0.9
0.0
 2.4
 -0.1
44 LOC4347820 probable anion transporter 5, chloroplastic 4347820 OSNPB_090556400 3.1 3.6
 2.5
 0.4
 1.0
 0.7
 0.1
0.1
 -0.2
-0.6
 1.0
-0.1
 -0.8
 0.1
 0.5
 0.7
-0.1
 1.1
-0.5
 0.9
0.5
 1.2
 3.1
45 LOC4342503 zinc finger A20 and AN1 domain-containing stress-associated protein 9-like 4342503 Os07g0168900 3.1 1.8
 4.3
 1.8
1.7
 1.1
0.8
 0.4
-0.3
 1.1
1.1
 2.0
2.0
 1.7
1.6
 -0.2
-0.2
 1.3
-0.2
 0.6
0.0
 1.9
0.6
 1.8
1.1
 1.9
1.7
 2.9
1.8
 1.6
-0.2
46 LOC4345657 malate dehydrogenase, chloroplastic 4345657 Os08g0434300 3.0 3.2
 2.8
 2.1
0.3
 2.3
 -0.0
 1.9
-0.5
 2.4
-0.7
 -0.7
-0.8
 2.7
0.3
 1.0
0.2
 1.6
-0.5
 0.8
0.2
 0.9
0.3
 -0.4
-0.8
 0.7
 -0.5
47 LOC4333986 uncharacterized LOC4333986 4333986 Os03g0729100 3.0 2.8
 3.3
 2.5
 1.2
 1.2
 -0.6
 -1.5
 -0.3
 1.9
 -0.3
 2.0
 0.4
 -0.3
 0.4
 0.4
 2.3
48 LOC4336846 UV-B-induced protein At3g17800, chloroplastic 4336846 Os04g0596300 3.0 3.5
 2.4
 1.0
 3.3
 -0.2
 1.7
1.2
 2.6
1.9
 1.7
1.4


1.8
 0.8
 0.3
 0.8
 1.6
49 LOC4333626 E3 ubiquitin ligase PARAQUAT TOLERANCE 3 4333626 Os03g0659400 3.0 3.2
 2.8
 -0.1












50 LOC4347000 protein TIFY 6b-like 4347000 OSNPB_090401300 3.0 3.3
 2.7
 1.3
0.1
 -0.4
-1.0
 -1.0
-1.2
 1.9
1.5
 1.6
0.5
 2.4
1.4
 0.5
0.5
 1.5
0.6
 -0.2
-0.7
 0.4
0.3
 0.2
0.2
 2.7
1.5
 1.8
1.4
 1.3
0.3
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