Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4346605   30S ribosomal protein 2, chloroplastic 
 osa-r.5   4346605   30S ribosomal protein 2, chloroplastic 
 osa-m.8   4346605   30S ribosomal protein 2, chloroplastic 
 ath-u.4   PSRP2   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.4   100811197   RNA recognition motif (RRM) domain-containing protein 
 gma-u.4   100783567   RNA recognition motif (RRM) domain-containing protein 
 ppo-u.4   7454889   30S ribosomal protein 2, chloroplastic 
 mtr-u.4   11440749   30S ribosomal protein 2, chloroplastic 

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Top 50 coexpressed genes to 4346605 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  18 336 20.41
 osa860   Porphyrin metabolism  1 42 -
 osa3060   Protein export  1 57 -
 osa195   Photosynthesis  2 77 -
 osa1240   Biosynthesis of cofactors  1 248 -

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osa:LOC4346605 (30S ribosomal protein 2, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4346605
osa-r.5
for
4346605
osa-m.8
for
4346605
ath-u.4
for
PSRP2
gma-u.4
for
100811197
gma-u.4
for
100783567
ppo-u.4
for
7454889
mtr-u.4
for
11440749
1 LOC4348816 tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 4348816 Os10g0461100 9.4 7.9
 11.0
 7.6
 5.2
5.0
 5.4
5.3
 2.0
1.4
 1.2
2 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 9.1 8.0
 10.3
 5.6
 5.7
5.0
 6.6
5.9
 5.4
 5.0
3 LOC4334651 50S ribosomal protein L18, chloroplastic-like 4334651 OSNPB_030828100 9.0 8.7
 9.3
 9.2
 5.4
 9.1
 4.8
4.6
 6.9
4 LOC4350988 GTPase Der 4350988 Os11g0638000 8.8 7.2
 10.5
 2.8
 6.1
 7.9
 3.1
 1.1
5 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 8.8 7.3
 10.3
 10.1
 8.4
8.1
 8.8
8.6
 6.0
 7.0
6 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 8.3 6.4
 10.2
 5.7
 4.9
4.8
 7.8
6.4
 6.6
1.2
 3.7
7 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 8.1 6.5
 9.6
 11.7
 5.6
 7.2
 3.0
 8.1
8 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 7.9 7.0
 8.9
 10.4
 6.7
 9.1
 5.9
5.6
 5.4
9 LOC4341869 50S ribosomal protein L24, chloroplastic 4341869 Os06g0683200 7.8 7.6
 8.0
 9.7
 5.6
5.5
 8.0
7.3
 5.6
 7.0
10 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 7.7 5.5
 9.9
 12.9
 7.3
5.4
 11.3
9.9
 8.0
 2.5
11 LOC4333624 ferredoxin C 1, chloroplastic 4333624 Os03g0659200 7.7 5.5
 9.9
4.6
1.7
 4.8
3.3
 2.2
1.2
 1.9
12 LOC4331442 50S ribosomal protein L11 4331442 Os03g0122200 7.7 6.9
 8.4
 16.0
 5.2
 7.8
 4.1
3.3
 5.3
13 LOC4332348 50S ribosomal protein L4, chloroplastic 4332348 Os03g0265400 7.6 6.5
 8.8
 9.5
 7.2
6.3
 11.3
5.8
 6.9
 3.2
14 LOC4333848 30S ribosomal protein S13, chloroplastic 4333848 Os03g0704000 7.5 8.2
 6.9
 9.8
 4.6
4.4
 6.0
5.9
 6.2
4.9
 4.0
15 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 7.5 7.2
 7.7
 9.6
0.6
 6.9
 7.1
 7.1
5.7
 3.7
16 LOC4331942 30S ribosomal protein S10, chloroplastic 4331942 Os03g0196800 7.5 5.2
 9.8




17 LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like 4326614 OSNPB_010618400 7.3 6.5
 8.1
 1.4
-1.4
 3.2
1.8
 3.8
3.5
 3.8
2.1
 2.2
0.6
18 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 7.3 6.0
 8.5
 12.3
 5.0
4.4
 7.4
5.8
 4.8
 2.7
19 LOC4346294 28 kDa ribonucleoprotein, chloroplastic 4346294 Os08g0557100 7.2 7.8
 6.5
 7.9
7.8
 7.5
5.4
 12.4
8.0
 7.9
7.9
 5.8
2.5
20 LOC4340846 trigger factor-like protein TIG, Chloroplastic 4340846 Os06g0308000 7.1 7.8
 6.4
 11.1
 5.6
4.9
 7.8
7.4
 4.6
 6.0
21 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 7.0 6.4
 7.5
 5.5
4.8
 6.6
4.8
 7.3
6.7
 9.1
3.7
 5.3
22 LOC4339629 uncharacterized LOC4339629 4339629 Os05g0565500 6.9 6.5
 7.3
3.4
3.1
 3.7
3.1
 3.1
 3.0
23 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 6.9 5.8
 8.0
 9.0
 6.1
5.5
 7.7
6.0
 6.8
 6.0
24 LOC4334555 50S ribosomal protein L17, chloroplastic 4334555 Os03g0815400 6.8 5.7
 8.0
 10.6
 4.9
4.5
 10.1
8.4
 9.2
3.5
 2.6
25 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 6.8 5.9
 7.8
 12.6
 7.9
5.4
 9.1
5.8
 6.0
2.4
 6.0
26 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 6.8 5.7
 7.8
 10.7
 5.0
 6.3
 8.9
1.6
 4.7
27 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 6.7 6.2
 7.2
 7.5
 3.8
3.4
 7.2
7.0
 5.9
0.4
 5.5
28 LOC4349098 uncharacterized LOC4349098 4349098 Os10g0512500 6.7 5.0
 8.4
 7.4
 5.2
 4.2
 5.3
 1.1
29 LOC4346938 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic 4346938 OSNPB_090382400 6.6 4.9
 8.4
 2.9
 4.4
 4.8
 6.4
 4.8
30 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 6.5 6.0
 7.1
 5.0
0.9
 5.2
4.6
 6.6
5.0
 4.4
4.0
 4.7
3.2
31 LOC9267495 signal recognition particle 54 kDa protein, chloroplastic 9267495 Os11g0153600 6.5 7.4
 5.6
 6.2
 5.5
2.4
 7.7
4.6
 3.5
2.8
 2.7
32 LOC4344001 29 kDa ribonucleoprotein A, chloroplastic 4344001 Os07g0631900 6.5 6.8
 6.1
 5.5
4.8
 6.6
4.8
 7.3
6.7
 9.1
3.7
 5.3
33 LOC4331189 50S ribosomal protein L9, chloroplastic 4331189 Os02g0822600 6.4 5.3
 7.5
 11.4
 5.4
4.8
 6.6
5.6
 4.5
 8.3
34 LOC4338460 uncharacterized LOC4338460 4338460 Os05g0337400 6.4 6.2
 6.6
 11.7
 6.2
6.2
 9.0
7.8
 6.5
 3.3
35 LOC4331249 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 4331249 Os02g0831200 6.3 5.8
 6.8
 8.1
 5.0
 4.3
 2.0
 2.5
36 LOC4324026 protein FLUORESCENT IN BLUE LIGHT, chloroplastic 4324026 Os01g0510600 6.3 6.3
 6.3
 6.8
 4.6
3.7
 5.5
4.7
 2.6
 4.5
37 LOC4331339 DEAD-box ATP-dependent RNA helicase 50-like 4331339 OSNPB_030108600 6.3 4.4
 8.3
 3.1
 4.8
4.3
 7.2
5.3
 3.8
 1.2
38 LOC4338005 30S ribosomal protein S31, chloroplastic 4338005 Os05g0186000 6.3 4.6
 8.0
 7.7
 6.3
6.2
 8.2
6.5
 7.1
 5.8
39 LOC4328072 uncharacterized LOC4328072 4328072 Os02g0115600 6.3 5.2
 7.3
 7.9
 2.6
 3.1
 3.3
 2.1
40 LOC4336951 oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 4336951 OSNPB_040610800 6.3 5.0
 7.5
 8.8
 5.6
 5.7
 2.5
 3.0
41 LOC4345435 thioredoxin-like protein CITRX, chloroplastic 4345435 OSNPB_080378900 6.2 6.1
 6.3
 6.9
 6.3
3.7
 3.9
3.9
 5.4
 3.3
2.5
42 LOC4334131 50S ribosomal protein L6, chloroplastic 4334131 Os03g0751400 6.2 5.0
 7.5
 9.0
 6.1
5.5
 7.7
6.0
 6.8
 6.0
43 wsl3 white stripe leaf3 4348823 Os10g0462800 6.2 6.4
 6.1
 5.9
 4.7
2.0
 5.2
1.9
 6.6
 2.1
44 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 6.2 5.9
 6.4
 4.0
 3.8
0.4
 5.1
-0.8
 4.1
 1.5
45 LOC4344632 multiple organellar RNA editing factor 9, chloroplastic 4344632 Os08g0139100 6.2 5.4
 6.9
 7.9
0.3
 6.7
4.9
 9.0
6.4
 7.4
1.9
 4.7
1.3
46 LOC4349608 elongation factor P 4349608 Os11g0116400 6.1 5.0
 7.3
 9.3
 4.8
3.3
 8.4
5.0
 8.2
 5.6
47 ASL2 Albino Seedling Lethal2 4328932 Os02g0259600 6.1 5.1
 7.1
 13.8
 8.6
7.9
 10.5
8.8
 5.7
2.2
 1.7
48 LOC9269534 ribosome-binding ATPase YchF 9269534 Os03g0781000 6.1 4.0
 8.2
 6.2
 2.7
 3.9
 5.0
 4.0
49 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 6.0 5.2
 6.9
 6.7
 5.6
4.0
 9.3
6.9
 5.0
4.4
 3.6
50 LOC4325010 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 4325010 Os01g0901900 6.0 5.6
 6.5
 4.3
 5.0
3.8
 6.4
6.0
 4.0
 3.2
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