Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4346745   pentatricopeptide repeat-containing protein At4g02750 
 osa-r.5   4346745   pentatricopeptide repeat-containing protein At4g02750 
 ath-u.4   AT4G02750   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.4   100804535   pentatricopeptide repeat-containing protein At4g02750 
 gma-u.4   100804011   pentatricopeptide repeat-containing protein At4g02750 
 sly-u.4   101267510   pentatricopeptide repeat-containing protein At4g02750 
 ppo-u.4   7493498   pentatricopeptide repeat-containing protein At4g02750 
 mtr-u.4   11406572   pentatricopeptide repeat-containing protein At4g02750 
 mtr-u.4   11408118   pentatricopeptide repeat-containing protein At4g02750 

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Top 50 coexpressed genes to 4346745 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  3 86 3.10
 osa240   Pyrimidine metabolism  1 63 -
 osa230   Purine metabolism  1 91 -
 osa3013   Nucleocytoplasmic transport  2 109 -
 osa480   Glutathione metabolism  1 114 -

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osa:LOC4346745 (pentatricopeptide repeat-containing protein At4g02750) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4346745
osa-r.5
for
4346745
ath-u.4
for
AT4G02750
gma-u.4
for
100804535
gma-u.4
for
100804011
sly-u.4
for
101267510
ppo-u.4
for
7493498
mtr-u.4
for
11406572
mtr-u.4
for
11408118
1 LOC4348797 midasin 4348797 Os10g0456950 4.2 6.0
 4.8
 5.0
4.1
 3.7
3.5
 3.7
 2.0
 3.1
 2.0
2 LOC4328019 putative pentatricopeptide repeat-containing protein At1g68930 4328019 Os02g0106300 3.9 5.9
 6.5
 8.8
 5.5
 3.6
 4.2
 2.5
0.8
 3.2
3.1
3 LOC4343809 putative pentatricopeptide repeat-containing protein At1g26500 4343809 Os07g0599201 3.5 5.0
 0.9
 0.1
0.1
 0.7
0.3
 0.3
-0.1
 1.3
1.0
 0.8
0.8
 2.4
1.8
4 LOC4325920 pentatricopeptide repeat-containing protein At3g22690 4325920 Os01g0646000 3.3 4.9
 10.5
 1.5
0.3
 1.9
0.2
 2.3
0.2
 2.2
5 LOC107278384 pentatricopeptide repeat-containing protein At4g02750 107278384 Os04g0432800 3.2 4.5






6 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 3.2 4.3
 10.2
 3.6
 3.1
 3.9


7 LOC4344353 pentatricopeptide repeat-containing protein At1g13040, mitochondrial 4344353 Os07g0688100 3.2 4.4
 2.9
 3.2
 4.1
 1.7
 1.8
 3.8
 0.8
8 LOC107277360 putative pentatricopeptide repeat-containing protein At2g01510 107277360 Os01g0101150 3.2 4.4


2.0
3.9
 2.2
9 LOC4346770 L-type lectin-domain containing receptor kinase IX.1 4346770 Os09g0334800 3.1 4.2






10 LOC107277890 pentatricopeptide repeat-containing protein At5g04780, mitochondrial 107277890 Os12g0157066 3.1 4.3
 6.7

3.9


11 LOC9269589 uncharacterized LOC9269589 9269589 Os10g0154600 3.0 4.0
 0.9
 4.3
 4.2
 2.4
 1.6
 3.1
 1.2
12 LOC4332902 pentatricopeptide repeat-containing protein At5g18950 4332902 Os03g0363700 3.0 4.3






13 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 3.0 4.3
6.1
3.9
 8.5
5.8
 3.6


14 LOC4352205 uncharacterized LOC4352205 4352205 Os12g0477700 3.0 4.2
 0.4
 -0.0
 -0.6
 -0.4
 -0.6
-0.6
 0.4
 0.1
15 LOC112936641 uncharacterized LOC112936641 112936641 3.0 4.1






16 LOC9267207 pentatricopeptide repeat-containing protein At5g15010, mitochondrial 9267207 Os01g0816000 2.9 4.0
 4.2
 5.3
 4.6
 0.6
 2.9
2.1
 2.5
 1.6
17 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 2.8 4.1






18 LOC4334193 pentatricopeptide repeat-containing protein At1g77360, mitochondrial 4334193 Os03g0761300 2.8 3.6
 6.3
 1.3
 0.7
 1.7
 2.5
 1.1
 2.8
19 LOC4331821 tubulin--tyrosine ligase-like protein 12 4331821 Os03g0179000 2.8 4.0
 1.6
 1.6
 0.9
 3.8
 2.3
 1.9
 2.3
20 LOC107276641 uncharacterized LOC107276641 107276641 Os07g0645701 2.8 4.2






21 LOC4345655 pentatricopeptide repeat-containing protein At3g47530 4345655 Os08g0434000 2.8 3.6
 6.1
 3.6
 5.1
 3.8
5.5
 1.7
22 LOC107278666 pentatricopeptide repeat-containing protein At1g26900, mitochondrial 107278666 Os08g0494350 2.7 4.0
 2.7

2.5
2.2
 2.2
23 LOC9270751 putative disease resistance protein RGA1 9270751 Os01g0149350 2.7 4.3






24 LOC9272531 pentatricopeptide repeat-containing protein At2g35030, mitochondrial 9272531 Os11g0433101 2.7 3.8
 12.3
 4.9
 5.2
 2.1
4.1
3.4
 1.6
1.5
25 LOC4351121 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4351121 Os11g0680200 2.7 3.6
 6.7
 8.0
 9.5
 4.6


26 LOC107277619 pentatricopeptide repeat-containing protein At1g53600, mitochondrial 107277619 Os06g0143500 2.7 3.8






27 LOC4334461 RNA-binding protein 28 4334461 Os03g0801800 2.7 3.9
 2.8
 3.7
2.8
 4.3
1.8
 1.5
 1.2
 1.7
 -0.1
28 LOC4337062 uncharacterized LOC4337062 4337062 Os04g0625350 2.7 3.7
 4.1
 2.1
1.7
 2.1
1.8
 2.4
 2.1
 3.9
 1.6
29 LOC4326378 regulator of telomere elongation helicase 1 homolog 4326378 OSNPB_010592900 2.7 3.6
 0.9
 2.3
 1.6
 0.6
0.8
 1.2
30 LOC4340651 pentatricopeptide repeat-containing protein At3g61520, mitochondrial 4340651 Os06g0249500 2.6 3.5
 8.4
8.2
 5.2
 5.3
 4.6
 3.2
 3.4
 0.4
31 LOC4346869 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic 4346869 Os09g0364500 2.6 3.8
 2.6
 4.2
 3.9
 3.6
 3.8
 2.4
 1.0
32 LOC4328201 pentatricopeptide repeat-containing protein At2g17140 4328201 Os02g0132100 2.6 3.5
 7.0
 5.1
 3.3
 0.1
4.8
 1.8
33 LOC4340258 ribonucleoside-diphosphate reductase large subunit 4340258 Os06g0168600 2.6 3.4
 1.8
 1.6
1.0
 2.9
1.6
 2.2
2.0
 0.9
0.7
 0.9
0.9
 0.9
0.0
34 LOC4351907 pentatricopeptide repeat-containing protein At5g27110 4351907 Os12g0256900 2.6 3.6
5.9
 5.6
 1.8


35 LOC4331780 nuclear pore complex protein NUP96 4331780 Os03g0172000 2.6 3.6
 1.6
 1.7
 2.7
 2.9
 2.8
 0.7
 1.4
36 LOC4349873 uncharacterized LOC4349873 4349873 Os11g0167300 2.6 3.2
 3.6
2.3
 5.3
3.7
 4.7
4.0
 3.0
 2.9
2.7
 5.0
 0.6
37 LOC107275716 pentatricopeptide repeat-containing protein At5g41170, mitochondrial 107275716 Os12g0615600 2.6 3.5
 2.9
 0.9
-0.6
 1.6
1.1
 -0.7
 2.5
 2.0
 1.6
38 LOC4333935 protein ILITYHIA 4333935 Os03g0721200 2.6 3.5
 1.9
 2.3
1.4
 1.9
1.4
 1.9
 1.2
 1.8
 1.3
39 LOC107275619 alpha-L-fucosidase 2 107275619 Os10g0339290 2.6 3.7
 0.1
 1.1
-0.6
 0.5
-0.2
0.1
-0.1
 0.5
 -0.4
40 LOC4344035 pentatricopeptide repeat-containing protein At5g48910 4344035 Os07g0636900 2.6 3.7






41 LOC4338370 pentatricopeptide repeat-containing protein At2g34400 4338370 Os05g0307200 2.6 3.6
 8.6
 5.9
3.0
 6.6
2.8
 2.5
 2.9

42 LOC107277288 probable serine/threonine-protein kinase ifkB 107277288 2.6 3.7






43 LOC4330009 pentatricopeptide repeat-containing protein At1g33350 4330009 2.6 3.6
 5.7
 6.0
 6.4

4.4
 1.9
44 LOC4343937 pentatricopeptide repeat-containing protein At4g28010 4343937 Os07g0621100 2.6 3.6






45 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 2.5 3.3
 12.5
 7.8
 7.3
 3.5
 4.3
1.8
 5.4
 2.0
46 LOC107278606 pentatricopeptide repeat-containing protein At5g39350 107278606 Os02g0663900 2.5 3.5
 14.5
 0.9
 1.4
 2.8
 4.4
 3.2
 1.3
47 LOC4334314 pentatricopeptide repeat-containing protein At4g21300 4334314 Os03g0781200 2.5 3.5
 1.1
 7.9
3.7
 6.3
4.1
 2.2
 0.1
 1.5
 1.1
48 LOC107281444 putative FBD-associated F-box protein At5g56690 107281444 2.5 3.5



1.2
0.9

49 LOC4336577 uncharacterized protein At3g06530 4336577 Os04g0548300 2.5 3.4
 1.7
 5.9
4.3
 4.4
4.0
 3.2
 1.3
 3.9
 0.1
50 LOC4325056 uncharacterized LOC4325056 4325056 Os01g0858700 2.5 3.6
 -0.1
 1.0
-0.4
 2.1
1.3
 1.2
 -0.1
 0.6
 1.3
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