Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4347791   DNA mismatch repair protein MLH3 
 osa-r.5   4347791   DNA mismatch repair protein MLH3 
 ath-u.4   AT1G20720   RAD3-like DNA-binding helicase protein 
 gma-u.4   100779610   regulator of telomere elongation helicase 1 homolog 
 sly-u.4   101255547   Fanconi anemia group J protein homolog 
 ppo-u.4   7474569   Fanconi anemia group J protein homolog 
 mtr-u.4   25482228   Fanconi anemia group J protein homolog 

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Top 50 coexpressed genes to 4347791 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3440   Homologous recombination  3 53 3.72
 osa3008   Ribosome biogenesis in eukaryotes  3 86 3.10
 osa62   Fatty acid elongation  2 38 2.54
 osa61   Fatty acid biosynthesis  2 43 2.43
 osa1212   Fatty acid metabolism  2 79 -

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osa:LOC4347791 (DNA mismatch repair protein MLH3) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4347791
osa-r.5
for
4347791
ath-u.4
for
AT1G20720
gma-u.4
for
100779610
sly-u.4
for
101255547
ppo-u.4
for
7474569
mtr-u.4
for
25482228
1 LOC4345906 uncharacterized LOC4345906 4345906 Os08g0491100 4.0 5.6




2 LOC4340043 WASH complex subunit 4 4340043 Os06g0136700 4.0 5.0




3 LOC4351241 enoyl-[acyl-carrier-protein] reductase, mitochondrial 4351241 Os12g0102100 3.9 5.3
 -0.6
 -0.1
 -0.2
 -0.6
 1.1
4 LOC4330529 clustered mitochondria protein 4330529 Os02g0717400 3.7 4.7
 1.6
 0.8
0.1
 1.3
 1.0
0.9
 3.0
5 LOC4341904 DNA repair protein REV1 4341904 Os06g0691000 3.6 4.5
 1.9
 1.1
 0.3
 -0.6
 0.4
6 LOC9266269 probable cleavage and polyadenylation specificity factor subunit 1 9266269 Os04g0252200 3.5 5.2
 0.9
 2.2
1.3
 0.7
 0.9
 3.0
7 LOC4352845 anaphase-promoting complex subunit 5 4352845 Os12g0626300 3.5 4.9
 3.1
 1.6
 2.3
 -0.0
 3.7
8 LOC4340858 probable helicase MAGATAMA 3 4340858 Os06g0310200 3.5 4.3
 -0.3
 0.6
 1.2
 0.4
 1.4
0.1
9 LOC4334027 probable NOT transcription complex subunit VIP2 4334027 Os03g0736000 3.4 4.9
 0.8
0.4
 1.2
0.8
 0.3
0.1
 0.4
0.1
 1.9
1.8
10 LOC4351629 putative CCA tRNA nucleotidyltransferase 2 4351629 Os12g0171200 3.4 4.3
 0.5
 0.5
0.3
 -0.9
-1.1
 0.5
 2.4
0.5
11 LOC4339821 structural maintenance of chromosomes protein 5 4339821 Os05g0596600 3.4 4.1
 1.4
 1.9
 1.7
 0.5
 3.4
2.5
12 LOC4337289 protein SON 4337289 Os04g0661700 3.4 4.1
 1.8
 1.1
 0.4
 0.4
 0.6
13 LOC4328210 structural maintenance of chromosomes protein 3 4328210 Os02g0133300 3.3 4.0
 1.8
 2.0
1.1
 -0.4
 1.1
 1.8
14 LOC4348797 midasin 4348797 Os10g0456950 3.3 4.3
 2.3
 2.8
1.9
 1.0
 0.9
 2.7
15 LOC4339743 uncharacterized LOC4339743 4339743 Os05g0583500 3.3 4.5
 0.5
 2.1
1.4
 0.5
0.2
 0.5
0.2
 1.1
16 LOC9271593 lysine-specific demethylase 5B 9271593 Os06g0731600 3.3 4.7
 -0.2
 1.7
1.3
 0.7
 1.4
 1.3
17 LOC4352686 uncharacterized LOC4352686 4352686 Os12g0594200 3.3 3.8
 3.0
 2.2
 -0.3
 0.6
 1.9
18 LOC4324716 bifunctional arginine demethylase and lysyl-hydroxylase psr-1 4324716 Os01g0773200 3.3 4.6
 1.5
 2.7
 -0.9
 0.9
 -0.0
19 LOC9272332 enoyl-[acyl-carrier-protein] reductase, mitochondrial 9272332 Os11g0102500 3.3 4.6
 -0.6
 -0.1
 -0.2
 -0.6
 1.1
20 LOC4349978 DNA topoisomerase 2-binding protein 1-A 4349978 Os11g0191300 3.2 3.9
 5.1
 1.7
 4.1
 2.4
 2.2
0.7
21 LOC4327735 carbon catabolite repressor protein 4 homolog 6 4327735 Os01g0610600 3.2 4.1
 0.9
 1.8
 0.3
 -0.5
 1.4
22 LOC4337137 double-strand break repair protein MRE11-like 4337137 OSNPB_040635900 3.2 3.6
 4.1
 1.5
 0.2
 0.2
 1.2
23 LOC4331719 glutathione reductase, chloroplastic 4331719 Os03g0163300 3.2 4.5
 0.1
 -0.6
-0.9
 -0.1
 -0.1
 0.1
24 LOC4330633 mediator of RNA polymerase II transcription subunit 23 4330633 Os02g0732700 3.2 4.1
 0.5
 -0.3
 1.4
 0.4
 0.9
25 LOC4333925 E3 SUMO-protein ligase SIZ2-like 4333925 OSNPB_030719100 3.2 3.9




26 LOC4326166 pseudo histidine-containing phosphotransfer protein 1 4326166 OSNPB_010743800 3.2 4.3
-1.1


27 LOC9271052 uncharacterized LOC9271052 9271052 Os12g0101000 3.2 4.5
 0.7
 0.7
-0.4
 -0.4
 0.1
 2.3
28 LOC4333346 DNA-binding protein SMUBP-2 4333346 Os03g0586900 3.2 4.0
 -0.1
 1.8
0.8
 -0.4
 0.2
 1.8
29 LOC4339802 chromatin modification-related protein EAF1 B 4339802 Os05g0593550 3.2 3.7
 1.1
1.1
 2.4
2.4
 0.4
0.1
 0.7
-0.4
 1.9
-0.2
30 LOC4327984 kinesin-like protein KIN-6 4327984 Os02g0101800 3.1 3.7
 5.1
 2.9
 0.9
2.4
31 LOC4327345 phosphoribosylaminoimidazole carboxylase, chloroplastic 4327345 Os01g0199900 3.1 3.6
 0.5
 2.3
1.7
 -0.4
 1.8
0.2
 1.7
32 LOC4338505 TATA box-binding protein-associated factor RNA polymerase I subunit B 4338505 Os05g0352700 3.1 4.1
 -0.1
 0.2
 -0.1
-1.4
 -0.8
 1.8
0.7
33 LOC4334111 DExH-box ATP-dependent RNA helicase DExH3 4334111 Os03g0748800 3.1 3.9
 2.0
 1.5
 0.7
 0.7
0.5
 2.0
34 LOC4324336 THO complex subunit 2 4324336 Os01g0916800 3.1 4.0
 1.2
 2.2
1.9
 0.3
 1.2
0.8
 2.1
1.6
35 LOC4324795 transcription factor LHW 4324795 Os01g0865600 3.1 4.2
 -0.0
 1.2
0.9
 -0.1
-0.5
 0.4
-0.3
 0.6
0.5
36 LOC4337062 uncharacterized LOC4337062 4337062 Os04g0625350 3.1 4.3
 2.3
 2.6
1.6
 1.6
 0.6
 3.1
37 LOC4326151 serine/threonine-protein kinase ATM 4326151 Os01g0106700 3.1 4.3
 2.3
 3.2
 1.0
 0.6
 3.4
38 LOC4344297 E3 ubiquitin-protein ligase SHPRH 4344297 Os07g0680500 3.1 3.4
 1.2
 0.6
 0.3
 -0.8
 2.4
39 LOC4343385 DEAD-box ATP-dependent RNA helicase 32-like 4343385 OSNPB_070517000 3.1 3.7
 -0.2
 1.3
1.2
 0.4
 1.1
1.0
 1.3
-0.4
40 LOC4347343 tRNA (cytosine(34)-C(5))-methyltransferase 4347343 Os09g0471900 3.0 4.0
 2.9
1.3
 0.8
0.4
 1.0
0.5
 1.8
 3.3
3.1
41 LOC9271043 putative pentatricopeptide repeat-containing protein At1g19290 9271043 Os05g0275100 3.0 4.3
 0.2
 0.3
 0.9
 0.7
 1.6
42 LOC107278649 protein RETICULATA-RELATED 5, chloroplastic 107278649 Os05g0474600 3.0 4.4
 0.5
0.5
 -0.3
-0.7
 -0.3
 -0.1
 -0.3
43 LOC9269812 RNA pseudouridine synthase 7-like 9269812 OSNPB_020512300 3.0 4.0
 0.9
 1.7
 -0.9
 0.7
 0.1
44 LOC4347697 DNA-(apurinic or apyrimidinic site) lyase 2 4347697 Os09g0536000 3.0 3.6
 0.2
 0.9
 -0.5
 0.4
 0.3
45 LOC4338511 anaphase-promoting complex subunit 1 4338511 Os05g0354300 3.0 3.7
 2.3
 3.3
1.6
 1.6
 2.5
 4.4
46 LOC4334509 calreticulin-2 4334509 3.0 3.8




47 LOC4336345 DNA mismatch repair protein MSH1, mitochondrial 4336345 Os04g0507016 3.0 3.7
 4.2
 3.3
2.1
 -0.1
 1.9
 1.6
48 LOC107278409 pentatricopeptide repeat-containing protein At2g26790, mitochondrial 107278409 Os11g0659400 3.0 4.3




49 LOC4349529 uncharacterized LOC4349529 4349529 Os11g0101200 3.0 4.2
 0.7
 0.7
-0.4
 -0.4
 0.1
 2.3
50 LOC9271765 uncharacterized ATP-dependent helicase YprA 9271765 Os07g0606500 3.0 3.8
 2.5
 0.9
 0.7
 0.2
 0.8
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