Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4348554   uncharacterized LOC4348554 
 osa-r.5   4348554   uncharacterized LOC4348554 
 osa-m.8   4348554   uncharacterized LOC4348554 
 ath-u.4   AT4G20330   Transcription initiation factor TFIIE, beta subunit 
 gma-u.4   100793998   general transcription factor IIE subunit 2 
 gma-u.4   100792075   transcription initiation factor IIE subunit beta 
 gma-u.4   100802433   general transcription factor IIE subunit 2 
 sly-u.4   101250226   uncharacterized LOC101250226 
 ppo-u.4   7478059   general transcription factor IIE subunit 2 
 mtr-u.4   25502025   general transcription factor IIE subunit 2 
 mtr-u.4   11443092   transcription initiation factor IIE subunit beta 

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Top 50 coexpressed genes to 4348554 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4141   Protein processing in endoplasmic reticulum  5 191 4.30
 osa561   Glycerolipid metabolism  1 84 -
 osa4120   Ubiquitin mediated proteolysis  2 149 -
 osa4144   Endocytosis  3 163 -
 osa3040   Spliceosome  1 196 -

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osa:LOC4348554 (uncharacterized LOC4348554) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4348554
osa-r.5
for
4348554
osa-m.8
for
4348554
ath-u.4
for
AT4G20330
gma-u.4
for
100793998
gma-u.4
for
100792075
gma-u.4
for
100802433
sly-u.4
for
101250226
ppo-u.4
for
7478059
mtr-u.4
for
25502025
mtr-u.4
for
11443092
1 LOC4349264 ubiquitin domain-containing protein DSK2a 4349264 Os10g0542200 5.4 7.4
 3.5
 5.2
3.2
 1.1
0.6
 2.9
1.9
 2.8
1.0
 3.6
2.1
 2.3
1.3
 0.7
-0.7
 0.8
0.6
2 LOC4343920 vacuolar protein sorting-associated protein 27 4343920 Os07g0618600 5.1 4.5
 5.7
 1.8
 2.5
1.6
 2.3
1.0
 2.7
1.2
 0.4
 3.3
1.8
 1.2
 2.1
3 LOC4341099 protein decapping 5 4341099 Os06g0496000 4.9 5.2
 4.6
 0.8
 1.4
1.3
 -0.7
-0.8
 -0.3
-0.5
 1.4
 2.5
1.0
 -0.2
 0.1
4 LOC4345167 alpha-soluble NSF attachment protein 2 4345167 Os08g0282400 4.9 5.6
 4.2
 4.2
 0.1
0.1
 1.5
1.3
 0.9
0.5
 3.8
2.8
 3.4
3.1
 1.0
0.2
 2.8
1.9
5 LOC4346652 ubiquitin-conjugating enzyme E2 variant 1C 4346652 Os09g0297100 4.8 5.6
 4.0
 2.7
2.2
 2.0
0.8
 2.2
2.2
 1.3
0.9
 2.7
1.5
 3.2
0.5
 1.9
 1.7
6 LOC4327451 ubiquitin-conjugating enzyme E2-17 kDa 4327451 Os01g0819500 4.8 7.4
3.5
3.5
 2.5
2.2
 2.8
2.7
 2.7
2.3
 3.3
3.1
 3.6
3.4
 1.7
1.1
 1.6
0.7
7 LOC4329868 ultraviolet-B receptor UVR8 4329868 Os02g0597000 4.8 4.9
 4.7
 -0.2
 -0.3
-0.4
 2.1
1.7
 -0.8
-1.3
 0.2
 -0.6
 -2.4
 2.8
8 LOC4339803 casein kinase 1-like protein 2 4339803 Os05g0593800 4.8 6.1
 3.5
 3.8
2.4
 2.2
2.2
 2.3
1.4
 4.3
3.2
 3.0
2.5
 2.0
0.9
 1.0
-0.5
 3.5
2.6
9 LOC4325199 class E vacuolar protein-sorting machinery protein HSE1 4325199 Os01g0169900 4.7 6.4
 3.0
 1.5
1.2
 1.8
1.1
 -0.0
-0.8
 0.2
-0.2
 2.1
2.0
 2.0
1.4
 0.5
-0.9
 2.1
1.1
10 LOC4334307 actin-depolymerizing factor 2-like 4334307 OSNPB_030780400 4.7 5.5
 3.9
 3.0
 -0.0
-0.4
 1.6
1.6
 1.0
-0.0
 2.5
0.5
 2.9
0.6
 1.5
0.8
 0.8
0.1
11 LOC4343996 transcription elongation factor 1 homolog 4343996 OSNPB_070631100 4.6 3.5
 5.8
 2.9
 2.6
2.0
 1.8
0.9
 3.0
1.3
 2.4
-0.4
 4.1
3.7
 1.7
 1.8
12 LOC4347834 cyclic nucleotide-gated ion channel 17 4347834 Os09g0558300 4.6 6.2
 2.9







13 LOC4328514 ubiquitin fusion degradation protein 1 homolog 4328514 Os02g0181800 4.5 5.7
 3.2
 6.3
4.0
 2.2
2.1
 3.3
2.3
 4.5
2.7
 7.4
 4.8
1.7
 1.3
 1.9
14 LOC4338884 uncharacterized protein At5g49945 4338884 Os05g0432400 4.5 5.3
 3.6
 2.0
1.7
 0.2
0.1
 0.6
0.0
 -0.6
-0.6
 2.7
 0.1
 0.7
 0.5
15 LOC4346348 mediator of RNA polymerase II transcription subunit 15a 4346348 Os08g0564800 4.5 4.8
 4.1
 1.4
 1.1
0.6
 1.3
1.2
 -0.3
-0.8
 1.6
 1.5
1.4
 0.2
-1.8
 2.9
0.3
16 LOC4341446 serine-threonine kinase receptor-associated protein 4341446 Os06g0598900 4.5 4.8
 4.1
 3.2
2.2
 1.3
0.5
 1.4
-0.8
 1.6
1.2
 1.6
 2.5
1.9
 2.0
 3.3
17 LOC4325877 TOM1-like protein 9 4325877 Os01g0229200 4.4 4.2
 4.6







18 LOC4327678 vesicle transport v-SNARE 13 4327678 Os01g0707300 4.3 5.8
 2.9
 4.1
2.5
 1.6
1.1
 3.2
2.4
 1.9
0.9
 3.2
1.4
 4.4
1.7
 1.6
0.7
 2.4
2.1
19 LOC4325192 autophagy-related protein 18d 4325192 Os01g0168500 4.3 4.6
 3.9
 1.9
0.0
 1.7
1.2
 1.1
-0.9
 1.0
0.3
 4.1
 1.4
1.2
 -1.2
 3.9
20 LOC4352518 serine/arginine repetitive matrix protein 2 4352518 Os12g0561200 4.3 3.1
 5.5
 1.9
1.6
 1.4
1.2
 1.3
0.7
 1.6
1.0
 0.5
-0.5
 1.6
1.2
 1.5
0.6
 1.3
1.2
21 LOC4334878 F-box protein At4g00755 4334878 Os03g0861800 4.2 5.9
 2.6
 1.2
 2.0
0.6
 3.5
1.6
 2.5
0.9
 3.1
2.5
 0.2
-0.0
 0.0
-0.2
 4.1
2.4
22 LOC4351066 uncharacterized LOC4351066 4351066 Os11g0661400 4.1 4.9
 3.4
 2.2
1.3
 0.4
0.1
 2.7
2.6
 -0.1
-0.4
 1.4
0.3
 -0.6
-1.2
 -0.6
-1.7
 2.1
-0.1
23 LOC4336920 uncharacterized LOC4336920 4336920 Os04g0606800 4.1 4.2
 4.1
 5.5
 0.1
-0.7
 0.7
0.4
 -1.0
-1.0
 4.1
 2.5
2.1
 0.9
 0.4
24 LOC4327033 uncharacterized LOC4327033 4327033 Os01g0763300 4.1 4.6
 3.7
 3.7
 0.3
0.1
 0.4
0.1
 -0.2
-0.4
 3.2
2.2
 0.1
 1.0
 2.3
25 LOC4339268 TNF receptor-associated factor homolog 1a 4339268 Os05g0508700 4.1 4.9
 3.3







26 LOC4326267 rab escort protein 1 4326267 Os01g0269100 4.1 3.3
 4.9
 3.0
 2.0
1.2
 1.2
1.1
 1.4
1.2
 2.6
 -0.3
-0.9
 -1.2
 3.2
27 LOC4335435 dnaJ protein ERDJ2-like 4335435 Os04g0307200 4.1 4.4
 3.7
 2.3
0.7
 -0.4
 0.6
 -0.0
 2.1
 3.1
2.4
 1.1
 0.2
28 LOC4343293 ras-related protein RABH1b 4343293 Os07g0496000 4.1 4.8
 3.3
 3.0
1.3
 0.8
-0.4
 3.3
1.3
 1.9
1.9
 2.1
0.4
 1.6
0.9
 1.9
0.9
 2.8
2.2
29 LOC4337419 clathrin light chain 1-like 4337419 OSNPB_040679100 4.0 5.6
 2.5
 3.5
2.5
 -0.1
-0.5
 1.6
1.0
 1.2
-0.6
 3.1
2.4
 2.8
1.3
 2.0
0.8
 0.7
-0.0
30 LOC4338497 nuclear pore complex protein NUP50B 4338497 Os05g0349500 4.0 3.3
 4.8
 2.7
1.9
 1.1
-0.4
 0.9
-1.8
 1.9
0.7
 0.2
-0.0
 4.5
3.1
 2.2
 0.8
31 LOC4333100 uncharacterized LOC4333100 4333100 Os03g0412200 4.0 5.8
 2.3







32 LOC4330597 protein FAM32A-like 4330597 Os02g0727500 4.0 3.7
 4.4
 3.2
 2.3
2.2
 1.6
0.1
 3.0
2.9
 1.6
0.6
 1.5
-0.6
 2.0
0.8
 3.2
0.9
33 LOC4335795 OTU domain-containing protein 5 4335795 Os04g0414100 4.0 3.3
 4.8
 3.7
 1.9
0.8
 2.8
0.3
 2.6
0.9
 2.3
1.5
 0.9
0.1
 -0.3
 2.1
34 LOC4329365 polyadenylate-binding protein-interacting protein 4 4329365 Os02g0480900 4.0 4.1
 3.9
 2.6
2.3
 1.9
1.6
 1.6
1.4
 3.3
2.9
 1.9
0.6
 1.9
0.5
 -0.2
-0.2
 4.5
0.6
35 LOC4332886 ER membrane protein complex subunit 4 4332886 Os03g0360500 4.0 5.1
 2.8
 2.2
 0.0
-0.5
 -0.5
-1.6
 0.2
-0.7
 3.0
 3.1
2.5
 3.5
2.6
 0.3
-0.2
36 LOC4347544 uncharacterized LOC4347544 4347544 Os09g0511500 4.0 4.3
 3.6







37 LOC4348266 probable E3 ubiquitin-protein ligase LOG2 4348266 Os10g0204100 4.0 4.0
 4.0
 3.8
2.8
 1.2
-0.1
 1.8
1.4
 1.3
-0.0
 1.7
0.9
 1.4
0.7
 0.7
0.4
 0.9
0.4
38 LOC4337820 cullin-1 4337820 Os05g0149600 4.0 5.2
 2.7
 4.7
 2.4
1.9
 4.4
2.1
 3.3
1.9
 3.6
3.3
 1.3
0.8
 1.5
1.2
 2.8
1.7
39 LOC4331199 uncharacterized LOC4331199 4331199 Os02g0823600 4.0 5.1
 2.8
 2.3
 0.4
-0.5
 1.7
1.0
 0.4
-1.1
2.3
 1.2
0.6
 1.2
0.5
40 LOC4340500 GEM-like protein 1 4340500 Os06g0218100 4.0 2.5
 5.4







41 LOC4332476 serine/arginine-rich splicing factor RS2Z32 4332476 Os03g0285900 4.0 5.7
 2.2
 1.3
0.0
 2.3
1.8
 1.6
1.6
 3.7
1.5
 1.5
0.8
 1.4
1.1
 2.7
 0.8
42 LOC4328487 calmodulin-binding protein 60 C 4328487 Os02g0177800 3.9 4.7
 3.2
 0.6
-0.1
 3.2
2.4
 0.2
-0.1
 3.3
2.4
 1.0
-0.0
 1.1
0.1
 -0.0
-0.6
 0.9
0.8
43 LOC4350739 E3 ubiquitin-protein ligase RNF25 4350739 3.9 3.9
 3.9
 2.3
 -1.0
 1.9
 -0.2
 1.7
 2.2
0.2
 1.6
0.3
 1.3
0.9
44 LOC4330983 probable serine incorporator 4330983 Os02g0792900 3.9 3.6
 4.2
 2.9
 0.4
-0.1
 0.4
-0.1
 -0.3
-0.5
 3.1
 3.9
3.0
 -1.2
 0.9
45 LOC4337743 uncharacterized LOC4337743 4337743 Os05g0137300 3.9 4.7
 3.1
 0.2
 2.2
1.5
 0.3
-0.0
 1.9
1.9
 1.3
 1.1
0.2
 0.4
 2.1
46 LOC4340644 dynamin-2B 4340644 Os06g0247800 3.9 3.9
 3.8
 2.6
1.1
 0.3
-0.4
 1.9
0.5
 -0.0
-0.5
 0.5
-0.3
 2.4
-0.2
 0.1
-0.5
 0.2
0.1
47 LOC4352739 ubiquitin-conjugating enzyme E2 variant 1C 4352739 Os12g0605400 3.9 4.4
 3.3
 2.7
2.2
 2.0
0.8
 2.2
2.2
 1.3
0.9
 2.7
1.5
 3.2
0.5
 1.9
 1.7
48 LOC4343612 ADP-ribosylation factor GTPase-activating protein AGD5 4343612 Os07g0563800 3.9 3.2
 4.5
 4.6
 0.8
0.6
 2.2
1.7
 1.0
0.8
 1.5
1.1
 4.5
3.3
 -0.5
-1.1
 2.1
-0.4
49 LOC4341494 vacuolar protein sorting-associated protein 32 homolog 2 4341494 Os06g0608500









50 LOC4327990 phytochrome-interacting ankyrin-repeat protein 2 4327990 Os02g0102600 3.9 4.4
 3.3
 1.6
-0.1
 0.4
0.4
 1.3
0.0
 0.3
-0.3
 0.7
 2.8
2.0
 0.7
 1.3
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