Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   9270208   protein RRP6-like 2 
 osa-r.5   9270208   protein RRP6-like 2 
 osa-m.8   9270208   protein RRP6-like 2 
 osa-u.4   4331677   protein RRP6-like 2 
 ath-u.4   AT1G54440   Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein 
 ath-u.4   AT5G35910   Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein 
 gma-u.4   100819332   protein RRP6-like 2 
 gma-u.4   100815329   protein RRP6-like 2 
 gma-u.4   100804872   protein RRP6-like 2 
 sly-u.4   101243936   protein RRP6-like 2 
 ppo-u.4   112325313   protein RRP6-like 2 
 ppo-u.4   7491060   protein RRP6-like 2 
 ppo-u.4   7482373   protein RRP6-like 2 
 mtr-u.4   25495837   protein RRP6-like 2 
 mtr-u.4   11432643   protein RRP6-like 2 

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Top 50 coexpressed genes to 9270208 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  5 86 5.99
 osa3020   RNA polymerase  3 52 3.74
 osa3440   Homologous recombination  3 54 3.70
 osa250   Alanine, aspartate and glutamate metabolism  1 53 -
 osa240   Pyrimidine metabolism  1 63 -

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osa:LOC9270208 (protein RRP6-like 2) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
9270208
osa-r.5
for
9270208
osa-m.8
for
9270208
osa-u.4
for
4331677
ath-u.4
for
AT1G54440
ath-u.4
for
AT5G35910
gma-u.4
for
100819332
gma-u.4
for
100815329
gma-u.4
for
100804872
sly-u.4
for
101243936
ppo-u.4
for
112325313
ppo-u.4
for
7491060
ppo-u.4
for
7482373
mtr-u.4
for
25495837
mtr-u.4
for
11432643
1 LOC4325041 DNA repair protein recA homolog 3, mitochondrial 4325041 Os01g0901200 10.2 9.0
 11.4
 1.1
0.3
 0.7
 3.7
 1.5
1.2
 1.8
0.8
 1.7
1.4
 3.0
 1.9
1.2
 2.5
1.7
 1.6
1.3
 1.7
1.1
 1.7
0.6
2 LOC9272465 multisubstrate pseudouridine synthase 7 9272465 Os05g0509300 8.5 7.3
 9.6
 0.8
0.7
 3.4
 4.6
 3.7
3.5
 3.5
2.7
 1.9
0.8
 2.0
 2.4
 2.8
 0.9
 1.9
 3.7
3 LOC4331367 uncharacterized LOC4331367 4331367 Os03g0111800 8.1 6.9
 9.3
 0.2
 0.2
 1.9
 4.1
 4.1
 3.1
 2.1
 3.8
 3.4
 2.0
 3.1
 4.5
4 LOC4336254 DNA-directed RNA polymerase III subunit 1 4336254 Os04g0492300 8.0 6.4
 9.5
 1.3
 2.8
 3.8
 5.2
 5.1
 2.4
 2.5
 4.1
 4.0
 1.1
 3.5
1.1
 3.4
1.6
5 LOC4351600 nucleolar protein 6 4351600 Os12g0166500 7.5 5.9
 9.1
 0.0
 2.8
 7.8
 2.6
2.4
 3.3
3.0
 1.5
1.1
 0.8
 3.4
 3.7
 1.1
 4.9
 5.1
6 LOC4342673 rRNA biogenesis protein RRP5 4342673 Os07g0203300 7.3 6.2
 8.4
 -0.6
 3.3
 7.5
 4.6
4.3
 4.7
3.8
 2.4
1.5
 2.7
 4.0
 4.4
 2.4
 3.0
 3.9
7 LOC9270304 lon protease homolog, mitochondrial-like 9270304 OSNPB_070689300 7.2 6.6
 7.8
 1.4
0.9
 0.6
 6.2
 3.0
1.4
 2.8
1.6
 1.8
0.9
 3.2
 2.9
2.8
 3.1
2.2
 0.3
-0.2
 2.7
 2.2
8 LOC4343611 elongator complex protein 1 4343611 Os07g0563700 7.0 7.0
 7.0
 0.1
 3.2
 7.4
 6.9
 8.2
 0.8
 5.0
 4.6
2.0
 4.7
2.2
 3.2
0.3
 5.2
 3.7
9 LOC4348184 chloride conductance regulatory protein ICln 4348184 Os10g0170000 6.7 3.7
 9.7
 1.0
0.1
 2.1
 4.4
 -0.2
-0.5
 -0.2
-0.9
 2.5
2.1
 2.0
 1.8
1.2
 2.2
1.3
 0.2
-0.9
 2.7
 1.9
10 LOC4336229 pentatricopeptide repeat-containing protein At1g06710, mitochondrial 4336229 Os04g0488500 6.6 5.5
 7.7
 0.9
 3.2
 4.4
 3.7
0.7
 3.2
0.4
 2.1
0.4
 2.1
 2.4
 2.6
 0.9
 3.1
 1.9
11 LOC4329835 DNA mismatch repair protein PMS1 4329835 Os02g0592300 6.5 5.4
 7.7
 1.0
 2.9
 2.7
 4.2
2.7
 3.4
2.7
 0.8
-0.2
 1.8
 0.4
 1.8
 0.8
 0.6
 1.3
12 LOC4352003 coilin 4352003 Os12g0288801 6.5 5.1
 7.9
 0.9
 3.2
 6.9
 3.4
3.3
 3.5
2.6
 2.1
1.0
 4.5
2.8
 3.8
2.5
 3.9
2.6
 2.1
1.9
 1.0
 3.1
13 LOC4338320 U3 small nucleolar RNA-associated protein 25 4338320 Os05g0295100 6.5 4.6
 8.4
 1.0
 1.9
 5.1
 4.3
3.0
 5.2
2.0
 1.5
1.4
 4.0
 2.0
 2.7
 1.9
 2.9
1.3
 2.3
1.2
14 LOC4334546 probable DNA gyrase subunit A, chloroplastic/mitochondrial 4334546 OSNPB_030812000 6.5 5.9
 7.1
 -0.5
 0.5
 2.9
 1.1
 1.3
 2.4
 1.6
 2.9
 3.4
 2.3
 2.0
 2.8
15 LOC4344498 squamous cell carcinoma antigen recognized by T-cells 3 4344498 Os08g0113200 6.5 5.5
 7.5
 1.2
 4.1
 7.3
 4.3
3.1
 3.9
2.2
 3.3
1.7
 3.5
 1.7
 1.8
 -0.1
 4.4
 4.6
16 LOC4345071 aspartate carbamoyltransferase, chloroplastic-like 4345071 OSNPB_080248800 6.4 4.9
 8.0
 -1.0
 -0.1
 2.1
 0.3
0.2
 0.5
-0.1
 1.0
0.5
 3.8
 1.2
 1.2
 -1.2
 3.6
0.7
 2.9
1.8
17 LOC4347787 25S rRNA (cytosine-C(5))-methyltransferase nop2 4347787 Os09g0551300 6.4 6.0
 6.9
 0.4
-0.2
 1.8
1.4
 5.0
5.0
 4.2
3.7
 5.3
4.6
 1.7
0.6
 5.3
1.0
 3.9
 4.7
 2.7
 2.5
 3.3
18 LOC4351433 U3 small nucleolar ribonucleoprotein protein MPP10 4351433 Os12g0133900 6.4 5.6
 7.2
 -0.0
-0.3
 2.4
 6.3
 3.2
2.9
 4.1
3.9
 1.1
-0.0
 4.6
 6.2
3.8
 5.8
4.0
 3.8
3.5
 3.9
 3.6
19 LOC4331644 WD repeat-containing protein 3 4331644 Os03g0151700 6.4 6.4
 6.3
 -0.3
 1.4
 6.3
 5.0
2.9
 5.9
2.5
 1.6
0.9
 4.4
 3.4
 3.7
 0.8
 3.9
 4.3
20 LOC4326297 something about silencing protein 10 4326297 Os01g0104800 6.3 4.9
 7.8
 -0.0
 2.7
 8.2
 5.5
4.1
 6.4
3.6
 2.3
0.9
 4.1
3.5
 3.6
 3.6
 0.9
 5.8
 4.0
21 LOC4331214 DEAD-box ATP-dependent RNA helicase 48-like 4331214 OSNPB_020826100 6.3 6.7
 5.9
 1.4
 2.3
 5.5
 4.5
2.3
 3.4
1.2
 2.2
0.1
 3.7
 3.5
2.0
 3.4
2.7
 0.8
-0.3
 2.9
 2.4
22 LOC4343142 tetratricopeptide repeat protein 27 homolog 4343142 Os07g0455100 6.3 6.6
 6.0
 1.0
 3.6
1.9
 6.0
3.0
 4.6
4.0
 5.5
4.2
 1.3
1.3
 2.8
 3.9
 4.1
 1.2
 3.3
 4.4
23 LOC4352218 DEAD-box ATP-dependent RNA helicase 28-like 4352218 OSNPB_120481100 6.1 4.8
 7.4
 0.7
 2.1
 6.2
 5.2
3.7
 6.5
3.8
 1.3
1.0
 3.6
 5.3
 5.6
 2.1
 4.0
 4.8
24 LOC4328227 myb-binding protein 1A-like protein 4328227 Os02g0135700 6.1 7.1
 5.1
 0.4
 1.4
 6.4
 3.9
3.5
 5.1
4.4
 1.1
1.0
 4.3
4.0
 4.5
2.2
 4.3
2.3
 1.1
0.8
 4.6
 4.4
25 LOC4329995 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 4329995 OSNPB_020617700 6.1 5.9
 6.3
 -0.9
 1.2
 5.4
 1.7
 1.5
 1.3
 2.0
 2.2
 2.5
 0.6
 2.4
 2.8
26 LOC4333869 zinc finger protein VAR3, chloroplastic 4333869 Os03g0708900 6.0 5.3
 6.8
 -0.3
 1.8
 2.7
 1.4
-0.1
 0.2
-0.4
 1.8
0.6
 1.1
 1.7
 2.1
 0.1
 2.3
 1.8
27 LOC4325781 pentatricopeptide repeat-containing protein At4g01990, mitochondrial 4325781 Os01g0301000 6.0 5.9
 6.0
 0.2










28 LOC4333677 acidic leucine-rich nuclear phosphoprotein 32-related protein 2-like 4333677 OSNPB_030668900 6.0 4.9
 7.0
 -1.6










29 LOC4343805 pentatricopeptide repeat-containing protein At4g21705, mitochondrial 4343805 Os07g0598500 6.0 3.8
 8.2
 -0.4
 2.3
 1.4
 1.4
1.2
 2.5
1.2
 1.2
0.2
 3.0
1.7
 1.8
0.9
 1.8
1.2
 -0.3
-0.4
 2.2
1.1
 2.7
0.5
30 LOC4325759 protein OSB3, chloroplastic/mitochondrial 4325759 Os01g0949060 6.0 5.1
 6.8
 -0.1
 2.1
2.0
 5.0
2.2
 -0.5
 -1.1
 2.3
 0.6
 0.1
 0.2
 -1.1
 2.5
 2.5
31 LOC4348797 midasin 4348797 Os10g0456950 5.9 4.9
 6.9
 0.5
 2.7
 5.6
 4.9
3.7
 4.8
3.8
 1.3
1.0
 3.5
 3.4
 3.4
 2.2
 2.2
 3.4
32 LOC4348309 glycine-rich RNA-binding protein 10 4348309 Os10g0322032 5.9 5.2
 6.6
 0.5
0.2
 1.3
1.1
 3.8
3.7
 2.3
1.4
 3.1
2.1
 1.0
0.8
 2.3
1.5
 2.0
1.2
 2.1
1.5
 1.4
0.9
 3.4
2.9
 2.3
2.3
33 LOC4337169 DNA-directed RNA polymerases IV and V subunit 2 4337169 Os04g0641000 5.9 5.7
 6.1
 0.0
-0.1
 2.5
2.0
 1.9
0.6
 0.2
0.0
 0.4
-0.2
 2.1
1.6
 3.1
0.4
 2.3
 2.5
 4.1
 2.5
1.6
 4.5
1.1
34 LOC4344789 DNA polymerase I A, chloroplastic-like 4344789 OSNPB_080175300 5.9 4.8
 6.9
 1.8
1.1
 3.0
2.5
 4.8
3.3
 2.3
1.6
 2.3
1.7
 2.8
1.8
 2.2
 2.4
2.4
 2.7
2.3
 0.0
-0.4
 1.8
1.7
 2.8
2.8
35 LOC4337062 uncharacterized LOC4337062 4337062 Os04g0625350 5.9 3.8
 8.0
 0.5
 2.2
 5.0
 4.9
4.2
 4.7
3.8
 1.7
0.3
 3.6
 3.6
 3.4
 0.9
 2.5
 3.6
36 LOC4346171 glycine--tRNA ligase, mitochondrial 1 4346171 Os08g0538000 5.9 7.3
 4.5
 0.3
-0.4
 0.9
 3.4
 0.6
 1.8
 2.4
 3.2
0.2
 3.4
2.3
 4.0
2.4
 1.3
1.0
 3.3
0.1
 2.3
0.5
37 LOC4329409 DNA repair protein RAD50 4329409 Os02g0497500 5.9 4.8
 6.9
 0.9
 4.8
 6.5
 1.6
 1.5
 2.8
 4.0
 2.3
 2.7
 2.5
 1.4
 2.7
38 LOC4350250 RRP15-like protein 4350250 Os11g0266000 5.8 5.2
 6.5
 0.2
 1.3
 5.4
 4.0
2.9
 4.3
2.8
 0.6
-0.2
 3.4
 4.7
 3.9
 1.2
 6.0
 2.5
39 LOC4335144 pumilio homolog 3 4335144 Os04g0201200 5.8 6.2
 5.4
 0.3










40 LOC4339341 periodic tryptophan protein 2 4339341 Os05g0519500 5.8 6.8
 4.8
 -0.7
 -0.1
 4.3
 4.5
3.2
 4.4
4.3
 1.3
0.1
 1.7
 4.0
3.3
 4.9
3.3
 2.4
0.2
 3.3
 3.7
41 LOC4338555 pentatricopeptide repeat-containing protein At1g10270 4338555 Os05g0365500 5.8 5.4
 6.2
 -1.0
 0.6
0.5
 6.2
1.9
 4.3
3.1
 3.8
3.2
 0.9
0.8
 4.2
 2.9
2.5
 2.6
2.6
 0.2
0.0
 2.8
 3.4
42 LOC4330262 tRNA pseudouridine synthase A 4330262 Os02g0668400 5.8 5.7
 5.8
 -0.7
 2.7
2.3
 3.2
1.1
 2.3
2.1
 3.3
2.7
 1.0
0.1
 4.0
 3.5
2.6
 3.9
2.8
 3.2
0.3
 3.1
2.5
 2.9
2.0
43 LOC4334285 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like 4334285 OSNPB_030775300 5.8 6.0
 5.5
 0.3
 2.1
 4.5
 5.4
5.3
 6.7
5.4
 2.0
1.6
 4.1
 4.0
 3.6
 0.7
 4.4
 3.2
44 LOC4340102 translation factor GUF1 homolog, mitochondrial-like 4340102 OSNPB_060144800 5.7 5.1
 6.4
 0.3
 2.3
 1.3
 3.1
 2.5
 0.7
 2.4
 3.8
 3.8
 1.2
 2.1
 2.1
45 LOC4334454 uncharacterized LOC4334454 4334454 Os03g0800800 5.7 4.5
 6.9
 1.7
1.1
 2.1
 3.9
 3.2
1.8
 2.9
1.5
 1.4
0.3
 2.0
1.2
 1.4
1.4
 1.5
0.9
 1.6
0.6
 3.4
 4.3
46 LOC9270457 DNA-directed RNA polymerase I subunit 2 9270457 Os10g0495600 5.7 7.6
0.8
 1.6
 6.8
 4.7
4.5
 4.2
3.0
 3.0
2.1
 2.3
 3.4
 3.7
 2.1
 3.8
 3.8
47 LOC4335539 uncharacterized LOC4335539 4335539 Os04g0347900 5.7 6.0
 5.4
 0.1
 2.0
1.9
 1.6
0.7
 1.9
0.8
 1.2
1.2
 0.4
0.2
 3.7
2.1
 -0.1
-0.7
 -0.1
-0.5
 1.2
-0.7
 2.2
1.8
 3.1
2.7
48 LOC4338325 proline-, glutamic acid- and leucine-rich protein 1 4338325 Os05g0295900 5.7 4.4
 7.0
 -0.1
-0.9
 1.2
 4.6
 2.9
2.5
 3.1
2.6
 3.1
2.4
 3.2
 3.3
 3.3
 1.5
 3.4
2.5
 3.1
3.0
49 LOC4346843 probable protein arginine N-methyltransferase 1 4346843 OSNPB_090359800 5.7 5.5
 5.9
 0.9
 1.3
0.7
 4.7
2.6
 1.0
0.5
 1.8
0.8
 0.1
-0.5
 2.0
1.7
 1.6
1.4
 1.8
1.4
 2.2
1.8
 2.6
 0.7
50 LOC4334667 pumilio homolog 24 4334667 Os03g0831100













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