Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4348732   pentatricopeptide repeat-containing protein At5g08305 
 osa-r.5   4348732   pentatricopeptide repeat-containing protein At5g08305 
 ath-u.4   AT5G08305   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.4   100801523   pentatricopeptide repeat-containing protein At5g08305 
 sly-u.4   101263897   pentatricopeptide repeat-containing protein At5g08305 
 mtr-u.4   11424652   pentatricopeptide repeat-containing protein At5g08305 

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Top 50 coexpressed genes to 4348732 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa230   Purine metabolism  1 91 -
 osa4141   Protein processing in endoplasmic reticulum  1 224 -

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osa:LOC4348732 (pentatricopeptide repeat-containing protein At5g08305) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4348732
osa-r.5
for
4348732
ath-u.4
for
AT5G08305
gma-u.4
for
100801523
sly-u.4
for
101263897
mtr-u.4
for
11424652
1 LOC4324492 pentatricopeptide repeat-containing protein At1g71060, mitochondrial 4324492 Os01g0505500 3.3 4.8
 6.6
 2.8
2.7
 1.5
 2.6
2 LOC9267207 pentatricopeptide repeat-containing protein At5g15010, mitochondrial 9267207 Os01g0816000 3.1 4.6
 1.9
 3.4
 1.8
 2.0
3 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 2.9 4.1
1.5
 3.9
 2.9
4 LOC107278543 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 107278543 Os07g0203900 2.8 4.0

1.2
5 LOC4344262 pentatricopeptide repeat-containing protein At3g18020 4344262 Os07g0674300 2.8 3.5
 6.7
 2.4
 2.2
 2.1
6 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 2.8 3.6
3.5
2.9
 3.5
7 LOC4327795 F-box only protein 7 4327795 Os01g0530500 2.8 3.8



8 LOC4344245 pentatricopeptide repeat-containing protein At2g32630 4344245 Os07g0671200 2.6 3.7



9 LOC112936052 pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like 112936052 2.6 3.7
 9.7
 2.4
 3.2
 0.4
10 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 2.6 3.3



11 LOC4333040 pentatricopeptide repeat-containing protein At4g33990 4333040 Os03g0396200 2.5 3.2
 5.9
 2.2
 1.0
 2.5
12 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 2.5 3.2



13 LOC107280019 putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial 107280019 2.5 3.5



14 LOC107279790 pentatricopeptide repeat-containing protein At1g71460, chloroplastic-like 107279790 2.5 3.4
 6.5
 2.4
 1.7
 2.1
15 LOC4335906 protein disulfide isomerase-like 1-2 4335906 OSNPB_040436300 2.5 3.7
 0.1
0.0
 0.9
0.3
 2.2
0.3
 0.5
16 LOC4340870 putative pentatricopeptide repeat-containing protein At3g01580 4340870 Os06g0314100 2.5 3.5



17 LOC4334935 putative disease resistance RPP13-like protein 1 4334935 Os04g0111900 2.5 3.4



18 LOC4352470 pentatricopeptide repeat-containing protein 4352470 Os12g0552300 2.5 3.6
 5.8
 2.8
1.6
 1.0
 1.4
19 LOC9270492 pentatricopeptide repeat-containing protein At5g56310 9270492 Os03g0169300 2.4 3.4
3.5
2.4
20 LOC9272531 pentatricopeptide repeat-containing protein At2g35030, mitochondrial 9272531 Os11g0433101 2.4 3.4
 7.8
 3.6
 5.2
 3.0
2.0
21 LOC9271701 pentatricopeptide repeat-containing protein At3g58590 9271701 Os01g0754700 2.4 3.5
 11.2
 3.5
 3.8
 2.3
22 LOC9271530 pentatricopeptide repeat-containing protein At3g29230 9271530 Os01g0914600 2.4 3.4



23 LOC4334286 pentatricopeptide repeat-containing protein At2g22070 4334286 Os03g0775400 2.4 3.0
 8.2
 2.6
 3.1
24 LOC4344190 putative pentatricopeptide repeat-containing protein At5g40405 4344190 Os07g0662700 2.4 3.0



25 LOC4327814 pentatricopeptide repeat-containing protein At3g16610 4327814 Os01g0977400 2.4 3.3
1.5
2.4
26 LOC4345851 pentatricopeptide repeat-containing protein At1g09410, mitochondrial 4345851 Os08g0481000 2.4 3.6
1.8
 2.8
 2.5
27 LOC107277736 uncharacterized LOC107277736 107277736 2.4 3.4



28 LOC4339867 uncharacterized LOC4339867 4339867 2.4 3.2



29 LOC4339896 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4339896 Os06g0112000 2.3 2.7
 4.6
 2.5
2.1
 4.0
 3.3
0.2
30 LOC4341090 pentatricopeptide repeat-containing protein At4g13650 4341090 Os06g0493801 2.3 3.3



31 LOC4325906 protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic 4325906 Os01g0673800 2.3 3.4
 -0.4
 -0.2
 1.1
-1.1
 -0.7
32 LOC4329167 pentatricopeptide repeat-containing protein At1g09900 4329167 Os02g0321000 2.3 3.6


-0.0
33 LOC4345871 tRNA (cytosine(34)-C(5))-methyltransferase 4345871 Os08g0484400 2.3 3.0



34 LOC4350065 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4350065 Os11g0213500 2.3 3.2
2.8
2.9
35 LOC4345325 pentatricopeptide repeat-containing protein At4g39530 4345325 Os08g0340900 2.3 2.7
 8.4
 2.8
 3.1
36 LOC4346006 putative pentatricopeptide repeat-containing protein At3g05240 4346006 Os08g0511000 2.3 2.9


2.3
37 LOC112936099 pentatricopeptide repeat-containing protein At1g20230-like 112936099 2.2 3.2
 7.7
2.9
 1.1
38 LOC4347812 pentatricopeptide repeat-containing protein At2g22410, mitochondrial 4347812 Os09g0555400 2.2 3.5


3.7
39 LOC9272050 pentatricopeptide repeat-containing protein At2g22410, mitochondrial 9272050 Os10g0400250 2.2 3.2
 5.8
3.7
 0.4
40 LOC107277967 putative pentatricopeptide repeat-containing protein At5g09950 107277967 Os01g0589900 2.2 3.1
 6.7
 2.0
 2.1
 2.7
41 LOC4342414 non-structural maintenance of chromosomes element 3 homolog 4342414 Os07g0151300 2.2 2.9
 0.0
 0.4
0.1
 -0.8
 1.7
42 LOC4351584 pentatricopeptide repeat-containing protein At4g15720 4351584 Os12g0163600 2.2 2.6


1.8
43 LOC4330860 pentatricopeptide repeat-containing protein At1g05750, chloroplastic 4330860 Os02g0769900 2.2 2.5
 6.1
 2.2
 4.3
 -0.3
-0.7
44 LOC4339437 glucan endo-1,3-beta-glucosidase 8 4339437 Os05g0535100 2.2 3.0
 1.2
0.1
 1.1
1.0
 1.4
-0.0
 1.3
-0.1
45 LOC4324899 probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 4324899 Os01g0888500 2.1 2.7
 1.0
 1.3
1.0
 2.1
 1.6
1.4
46 LOC4339632 uncharacterized LOC4339632 4339632 Os05g0566300 2.1 2.9
 0.9
 2.3
0.3
 -0.7
 0.3
47 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300
1.0
 0.2
 1.3
 1.2
48 LOC4344353 pentatricopeptide repeat-containing protein At1g13040, mitochondrial 4344353 Os07g0688100 2.1 2.8
 2.7
 2.6
 2.3
 2.7
49 LOC4341512 pentatricopeptide repeat-containing protein At1g03540 4341512 Os06g0611200 2.1 3.0



50 LOC4350219 pentatricopeptide repeat-containing protein At3g12770 4350219 Os11g0256100




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