Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4348798   splicing factor 3B subunit 4 
 osa-r.5   4348798   splicing factor 3B subunit 4 
 osa-m.8   4348798   splicing factor 3B subunit 4 
 ath-u.4   emb2444   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.4   100791039   splicing factor 3B subunit 4 
 gma-u.4   100792707   splicing factor 3B subunit 4 
 sly-u.4   101244943   splicing factor 3B subunit 4 
 ppo-u.4   7473156   splicing factor 3B subunit 4 
 mtr-u.4   11419010   splicing factor 3B subunit 4 

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Top 50 coexpressed genes to 4348798 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  9 336 7.51
 osa3040   Spliceosome  5 176 4.47
 osa3015   mRNA surveillance pathway  3 110 2.79
 osa3013   Nucleocytoplasmic transport  1 109 -
 osa3018   RNA degradation  1 112 -

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osa:LOC4348798 (splicing factor 3B subunit 4) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4348798
osa-r.5
for
4348798
osa-m.8
for
4348798
ath-u.4
for
emb2444
gma-u.4
for
100791039
gma-u.4
for
100792707
sly-u.4
for
101244943
ppo-u.4
for
7473156
mtr-u.4
for
11419010
1 LOC4325394 serine/arginine-rich splicing factor SR45 4325394 Os01g0959000 7.0 6.3
 7.6
 7.2
 7.5
5.7
 7.2
5.3
 6.2
 6.6
 9.6
2 LOC4325772 flowering time control protein FY 4325772 Os01g0951000 5.2 5.8
 4.6
 5.1
 4.9
4.8
 5.5
5.5
 8.7
 6.8
3.7
 7.2
3 LOC4347529 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial 4347529 Os09g0509000 5.1 6.7
 3.6
 5.8
 7.2
7.1
 5.2
5.0
 4.2
3.8
 8.5
8.0
 6.1
3.0
4 LOC4346346 zinc finger protein 593 4346346 Os08g0564500 5.0 4.6
 5.5
 0.3
 3.0
2.8
 1.4
1.3
 3.1
 3.0
2.3
 1.8
5 LOC4335854 COP9 signalosome complex subunit 8 4335854 Os04g0428900 4.9 3.2
 6.6
 0.3
 0.9
-1.1
 -0.4
-1.9
 1.6
 2.8
 1.6
6 LOC4345702 uncharacterized protein At4g14342 4345702 Os08g0444100 4.6 5.4
 3.7
 0.4
 2.1
-0.7
 1.0
0.4
 2.0
0.2
 0.6
-1.7
 0.3
7 LOC4350250 RRP15-like protein 4350250 Os11g0266000 4.4 3.9
 4.9
 1.3
 2.6
2.3
 1.7
1.2
 0.9
 3.9
 3.1
8 LOC4337249 COP9 signalosome complex subunit 5a 4337249 Os04g0654700 4.2 3.3
 5.2
 1.7
1.6
 3.4
 3.3
 2.2
1.5
 1.4
1.3
 3.1
1.8
9 LOC4335541 protein CMSS1 4335541 Os04g0348100 4.2 3.5
 5.0
 1.4
 2.4
 -0.2
 0.5
 3.3
 2.0
10 LOC4328199 ras GTPase-activating protein-binding protein 2 4328199 Os02g0131700 4.2 4.2
 4.3
 3.5
 3.8
2.9
 3.5
2.5
 4.1
0.8
 2.1
0.8
 4.6
2.7
11 LOC4345446 protein Dr1 homolog 4345446 Os08g0383700 4.2 4.1
 4.3
 1.0
0.7
 1.4
1.1
 0.8
0.8
 1.6
-0.2
 3.0
-1.0
 0.1
-0.3
12 LOC4325048 polypyrimidine tract-binding protein homolog 3 4325048 Os01g0867800 4.1 5.3
 2.8
 2.5
 0.9
0.0
 0.2
-0.1
 2.9
2.2
 1.6
1.4
 3.7
2.0
13 LOC4352707 flowering locus K homology domain-like 4352707 4.0 4.1
 3.9
 3.5
 3.8
3.0
 4.1
3.5
 3.9
3.1
 5.2
2.9
 4.4
4.3
14 LOC4345944 COP9 signalosome complex subunit 6a 4345944 Os08g0500000 4.0 4.5
 3.5
 2.2
1.5
 2.4
1.0
 3.2
3.0
 2.7
 3.8
 3.1
15 LOC4345238 50S ribosomal protein L15 4345238 Os08g0310100 4.0 4.9
 3.1
 0.7
 1.9
1.1
 0.8
-1.0
 4.2
 4.9
3.8
 5.8
3.8
16 LOC4335926 protein TIC 40, chloroplastic 4335926 Os04g0439900 4.0 4.3
 3.6
 1.9
 2.8
1.7
 2.5
1.9
 1.8
 4.2
2.8
 3.1
17 LOC4332942 protein LTV1 homolog 4332942 Os03g0372700 4.0 4.7
 3.3
 0.0
 3.0
2.7
 3.0
2.5
 -0.2
 4.6
 3.3
18 LOC4339782 RGG repeats nuclear RNA binding protein A 4339782 Os05g0589600 3.9 3.2
 4.6
 2.9
0.4
 3.9
3.8
 4.7
3.4
 2.5
1.9
 3.5
3.2
 6.1
6.0
19 LOC4343784 FRIGIDA-like protein 3 4343784 Os07g0592300 3.9 3.5
 4.3
1.8
0.4
 0.5
-0.4
 1.1
 -0.2
 2.8
20 LOC4337145 regulation of nuclear pre-mRNA domain-containing protein 1A 4337145 Os04g0636700 3.9 4.4
 3.4
 4.6
3.2
 3.1
2.9
 2.5
2.0
 1.9
 4.1
3.9
 2.0
21 LOC4345234 eukaryotic translation initiation factor 3 subunit I 4345234 Os08g0308100 3.9 5.2
 2.5
 0.0
-0.3
 3.8
3.2
 3.0
2.6
 1.7
 2.3
 3.3
22 LOC4332334 splicing factor 3A subunit 2 4332334 Os03g0263500 3.9 4.6
 3.1
 6.4
 6.3
 5.6
 8.2
 6.4
3.4
 6.4
23 LOC4328958 U1 small nuclear ribonucleoprotein C-1 4328958 Os02g0266100 3.8 5.3
 2.4
 5.6
 5.9
5.6
 6.0
4.0
 3.0
 6.6
 6.9
1.6
24 LOC4331347 basic transcription factor 3 4331347 Os03g0109600 3.8 4.2
 3.5
 1.4
1.1
 4.4
2.5
 1.9
1.0
 3.8
2.8
 1.5
1.1
 2.0
1.9
25 LOC4342632 WW domain-binding protein 11 4342632 Os07g0192900 3.8 4.3
 3.3
 5.9
 5.7
 4.3
 6.4
 6.5
4.2
 6.1
3.9
26 LOC4349653 40S ribosomal protein S16-like 4349653 Os11g0127900 3.8 3.3
 4.3
 0.7
-0.5
 5.0
3.5
 4.4
3.3
 1.9
1.4
 2.6
1.7
 4.9
4.2
27 LOC4328599 zinc finger CCCH domain-containing protein 14-like 4328599 OSNPB_020194200 3.8 3.3
 4.3
 1.5
-0.5
 6.5
4.4
 6.1
5.0
 4.6
4.2
 3.3
3.0
 7.0
3.6
28 LOC4328823 U2 small nuclear ribonucleoprotein A' 4328823 Os02g0234800 3.8 3.8
 3.7
 0.3
 2.4
1.1
 -0.2
-1.1
 1.3
 2.2
 1.7
29 LOC4338202 uncharacterized protein At4g28440 4338202 Os05g0244600 3.8 3.9
 3.7
 3.7
1.2
 2.2
1.7
 1.0
0.5
 2.4
1.3
 2.6
1.7
 3.3
1.6
30 LOC4347710 proteasome subunit alpha type-7-B-like 4347710 OSNPB_090538200 3.8 3.6
 3.9
 2.8
2.2
 4.0
2.5
 1.0
-0.8
 2.7
 2.4
2.1
 3.0
31 LOC4342580 40S ribosomal protein S15-like 4342580 3.7 3.5
 3.9
 0.2
-0.2
 1.9
1.7
 2.5
1.4
 2.0
2.0
 3.2
2.9
 4.9
3.6
32 LOC4336070 prohibitin-3, mitochondrial 4336070 Os04g0462900 3.7 3.9
 3.6
 2.6
1.7
 4.5
4.3
 7.4
3.9
 4.6
3.7
 5.0
4.8
 3.2
2.9
33 LOC4329362 40S ribosomal protein S27 4329362 Os02g0478700 3.7 3.6
 3.8
 2.4
0.1
 1.6
0.5
 1.7
0.4
 3.6
 3.2
2.7
 2.7
1.8
34 LOC4328860 probable splicing factor 3A subunit 1 4328860 Os02g0245000 3.7 3.1
 4.3
 3.8
1.1
 3.4
3.3
 4.1
3.4
 3.5
3.5
 4.5
2.0
 2.9
35 LOC4344523 40S ribosomal protein S13-1 4344523 OSNPB_080117200 3.7 5.4
 1.9
 0.8
0.6
 0.9
0.8
 3.1
2.1
 3.0
2.6
 2.8
2.2
 2.8
2.2
36 LOC4333093 uncharacterized LOC4333093 4333093 Os03g0411000 3.7 5.0
 2.4





37 LOC4348999 vacuolar-sorting protein BRO1 4348999 Os10g0495300 3.7 3.0
 4.3
 4.8
 3.3
0.2
 3.3
1.9
 4.4
2.9
 3.3
0.5
 3.3
38 LOC4346392 DNA-directed RNA polymerases II, IV and V subunit 3 4346392 Os09g0110400 3.7 5.3
 2.0
 1.3
0.5
 1.7
1.0
 2.4
1.9
 1.3
 3.2
 2.8
39 LOC4329831 60S ribosomal protein L6-3 4329831 Os02g0591700 3.6 3.6
 3.7
 1.1
0.8
 3.4
3.2
 3.5
3.2
 1.4
0.9
 3.5
2.7
 4.0
3.3
40 LOC4333327 multiple organellar RNA editing factor 3, mitochondrial 4333327 Os03g0581600 3.6 4.0
 3.2
 2.5
 1.7
0.9
 6.2
4.9
 2.0
 4.3
 3.1
41 LOC4342526 40S ribosomal protein S18 4342526 Os07g0173501 3.6 2.5
 4.7
 -0.1
-1.0
 1.0
0.7
 2.0
1.5
 2.6
1.9
 2.9
2.1
 2.6
2.3
42 LOC4352560 60S ribosomal protein L8 4352560 Os12g0567700 3.6 4.2
 3.0
 0.3
-0.0
 4.5
3.9
 3.3
3.2
 3.8
2.7
 2.4
2.3
 6.3
2.9
43 LOC4331258 outer envelope pore protein 21, chloroplastic-like 4331258 OSNPB_020832200 3.6 5.3
 1.8
 -0.7
-0.9
 1.3
 0.6
 -0.4
 -0.1
 0.1
44 LOC4333084 transcription initiation factor TFIID subunit 9 4333084 Os03g0408500 3.6 3.3
 3.9
 4.5
 3.1
1.7
 4.8
3.9
 2.2
 0.7
 5.1
4.5
45 LOC4337459 ribosome biogenesis regulatory protein homolog 4337459 Os04g0685100 3.6 4.7
 2.4
 2.2
 3.2
2.7
 1.0
-0.1
 2.2
 3.1
 2.8
46 LOC4324661 RGG repeats nuclear RNA binding protein A 4324661 Os01g0721900 3.5 4.1
 3.0
 2.9
0.4
 3.9
3.8
 4.7
3.4
 2.5
1.9
 3.5
3.2
 6.1
6.0
47 LOC4333306 60S ribosomal protein L13-2 4333306 Os03g0576700 3.5 3.6
 3.5
 0.7
-0.9
 2.7
2.0
 4.0
2.5
 3.0
1.8
 2.8
1.8
 4.9
4.9
48 LOC4351059 WD repeat-containing protein VIP3 4351059 Os11g0660300 3.5 1.9
 5.2
 0.2
 3.8
2.4
 3.4
2.5
 2.5
1.7
 3.1
 5.4
49 LOC4337319 zinc finger CCCH domain-containing protein 31-like 4337319 OSNPB_040665700 3.5 4.4
 2.7
 1.5
-0.5
 6.5
4.4
 6.1
5.0
 4.6
4.2
 3.3
3.0
 7.0
3.6
50 LOC4337444 pre-mRNA cleavage factor Im 25 kDa subunit 2 4337444 Os04g0683100 3.5 3.6
 3.4
 3.8
 1.2
0.3
 0.4
-0.6
 2.2
1.0
 -0.3
 2.5
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