Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4349027   protein NEOXANTHIN-DEFICIENT 1-like 
 osa-r.5   4349027   protein NEOXANTHIN-DEFICIENT 1-like 
 osa-m.8   4349027   protein NEOXANTHIN-DEFICIENT 1-like 
 ath-u.4   AT1G28100   uncharacterized protein 
 gma-u.4   100306249   protein NEOXANTHIN-DEFICIENT 1 
 sly-u.4   NXD1   Protein NEOXANTHIN-DEFICIENT 1 
 ppo-u.4   7482818   protein NEOXANTHIN-DEFICIENT 1 
 ppo-u.4   7481186   protein NEOXANTHIN-DEFICIENT 1 
 mtr-u.4   25487171   protein NEOXANTHIN-DEFICIENT 1 

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Top 50 coexpressed genes to 4349027 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa1240   Biosynthesis of cofactors  4 233 2.84
 osa906   Carotenoid biosynthesis  2 30 2.74
 osa860   Porphyrin metabolism  2 42 2.45
 osa130   Ubiquinone and other terpenoid-quinone biosynthesis  2 42 2.45
 osa900   Terpenoid backbone biosynthesis  2 52 2.27

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osa:LOC4349027 (protein NEOXANTHIN-DEFICIENT 1-like) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4349027
osa-r.5
for
4349027
osa-m.8
for
4349027
ath-u.4
for
AT1G28100
gma-u.4
for
100306249
sly-u.4
for
NXD1
ppo-u.4
for
7482818
ppo-u.4
for
7481186
mtr-u.4
for
25487171
1 LOC4344566 zinc finger CCCH domain-containing protein 54-like 4344566 OSNPB_080126700 6.8 5.6
 8.1
 1.8
 1.0
0.9
 0.7
0.4
 0.1
-0.4
 0.5
0.2
 -0.0
-0.2
2 LOC4347585 uncharacterized LOC4347585 4347585 Os09g0517000 5.8 5.6
 6.0
 1.6
 0.7
0.0
 0.7
 0.3
 1.5
 1.4
3 LOC4329862 rhodanese-like domain-containing protein 11, chloroplastic 4329862 Os02g0596000 5.6 4.7
 6.5
 3.7
 1.8
 3.8
 1.1
 1.5
 2.7
4 LOC4344427 serine/threonine-protein kinase STY17 4344427 Os08g0103000 5.5 3.6
 7.4





5 LOC4344589 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 4344589 Os08g0130400 5.3 3.2
 7.4
 3.2
 2.3
1.7
 2.1
 0.3
 1.3
 1.6
6 LOC4324196 lycopene epsilon cyclase, chloroplastic 4324196 Os01g0581300 5.1 4.0
 6.3
 1.6
 1.6
-0.8
-0.2
 1.5
 1.2
7 LOC4338768 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic-like 4338768 OSNPB_050408900 5.0 3.9
 6.2
 1.9
-0.5
 3.4
1.5
 -0.2
-0.7
 1.5
0.3
 0.9
0.4
 0.7
-0.4
8 LOC4349041 thylakoid lumenal 17.4 kDa protein, chloroplastic 4349041 Os10g0502000 4.7 3.2
 6.1
 1.0
 0.7
0.6
 2.4
 -1.0
 -0.1
 1.8
9 LOC4333105 nuclear transcription factor Y subunit B-8-like 4333105 Os03g0413000 4.5 4.2
 4.8
 1.2
-1.6
 2.0
-0.6
 1.0
0.8
 -0.4
-0.5
 0.8
0.2
 2.0
0.5
10 LOC4326140 peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic 4326140 Os01g0111100 4.5 4.0
 5.0
 1.5
 1.3
0.5
 0.7
 1.2
 0.0
 2.0
11 LOC4337852 GATA transcription factor 23 4337852 Os05g0155400 4.1 4.1
 4.1
 -0.2
-0.4
 0.5
0.4
 0.8
0.3
 1.3
1.1
 0.7
0.7
 0.1
0.0
12 LOC4324026 protein FLUORESCENT IN BLUE LIGHT, chloroplastic 4324026 Os01g0510600 4.0 2.5
 5.6
 1.7
 1.7
0.6
 3.6
2.7
 1.0
 -0.6
 1.6
13 LOC4349044 glutamyl-tRNA reductase, chloroplastic-like 4349044 OSNPB_100502400 4.0 2.4
 5.6
 1.5
-0.5
 1.2
0.9
 0.7
-0.4
 0.0
-0.1
 1.0
-0.4
 0.4
-0.2
14 LOC9266421 uncharacterized LOC9266421 9266421 4.0 3.8
 4.2





15 LOC4325465 thylakoid lumenal 15 kDa protein 1, chloroplastic 4325465 Os01g0144100 3.9 3.0
 4.9
 0.8
 2.6
0.6
 2.4
 0.7
-0.9
 0.9
0.0
 1.5
16 LOC4342450 CST complex subunit TEN1 4342450 Os07g0160300 3.9 3.3
 4.6





17 LOC4332771 uroporphyrinogen decarboxylase 2, chloroplastic-like 4332771 OSNPB_030337600 3.9 2.6
 5.2
 2.5
 0.6
-0.1
 0.4
 0.1
-0.1
 0.5
0.1
 0.5
18 LOC4332887 transcription termination factor MTEF1, chloroplastic 4332887 Os03g0360600 3.8 2.2
 5.5
 3.2
 0.7
0.7
 1.5
 1.5
 0.1
 0.7
19 LOC4342587 uncharacterized LOC4342587 4342587 Os07g0185200 3.8 3.3
 4.3
 4.7
1.4
 0.2
-1.0
 -0.3
 1.3
-1.3
 0.0
-1.3
 2.0
20 LOC9268149 uncharacterized LOC9268149 9268149 3.8 5.1






21 LOC4328173 transcription factor HBP-1a 4328173 Os02g0128200 3.8 3.6
 3.9
 1.3
 1.0
0.2
 -0.1
 0.6
0.2
 1.0
1.0
 -0.1
22 LOC4331514 probable signal recognition particle 43 kDa protein, chloroplastic 4331514 OSNPB_030131900 3.7 2.5
 4.9
 1.1
 0.6
 1.3
 -0.0
-1.0
 0.9
-0.1
 1.1
23 LOC4348208 pentatricopeptide repeat-containing protein MRL1, chloroplastic 4348208 Os10g0181200 3.7 3.0
 4.3
 0.9
 2.6
0.4
 2.4
 0.1
 2.1
 1.5
24 LOC4344969 chloroplast envelope membrane protein 4344969 Os08g0224300 3.7 2.6
 4.7
 4.6
 0.9
-0.7
 2.0
 1.0
-0.6
 0.4
-0.4
 -0.5
25 LOC4341927 uncharacterized LOC4341927 4341927 Os06g0694400 3.6 3.0
 4.2





26 LOC4343584 protein THYLAKOID FORMATION1, chloroplastic-like 4343584 OSNPB_070558500 3.6 4.5
 2.7
 1.6
 2.3
1.8
 0.9
 -0.0
-0.9
 0.7
0.1
 1.9
1.5
27 LOC9271926 F-box/LRR-repeat protein At3g26922 9271926 Os11g0202300 3.6 3.0
 4.1





28 LOC9270595 serine/threonine-protein kinase STY8 9270595 Os04g0686650 3.5 3.6
 3.4





29 LOC4342137 phytoene synthase 2, chloroplastic 4342137 OSNPB_060729000 3.5 2.0
 5.0
 -0.2
 1.5
1.0
 2.3
1.7
 -0.4
-0.9
 1.1
0.6
 0.9
0.3
30 LOC4325592 uncharacterized LOC4325592 4325592 Os01g0768600 3.5 3.4
 3.6
-0.0


1.1
0.4
31 LOC4334324 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like 4334324 Os03g0782500 3.5 3.1
 3.9





32 LOC4351045 lipase 4351045 Os11g0655800 3.5 2.7
 4.2





33 LOC4345443 peptidyl-prolyl cis-trans isomerase, chloroplastic 4345443 Os08g0382400 3.4 1.2
 5.7
 0.9
 0.6
0.5
 1.3
 -0.2
 0.0
 1.9
34 LOC9266204 nuclear transcription factor Y subunit C-2-like 9266204 OSNPB_030251350 3.4 3.1
 3.7
 2.1
0.8
 1.0
-0.8
 1.1
-0.2
 1.4
0.2
 0.1
0.0
 0.7
-0.6
35 LOC4346357 ribokinase 4346357 Os08g0566400 3.3 3.9
 2.7
 -0.0
 0.6
0.3
 4.3
0.5
 1.4
 1.3
 1.4
0.6
36 LOC4348836 WD repeat-containing protein WDS homolog 4348836 Os10g0465000 3.3 3.0
 3.6
 2.0
 1.5
 -0.2
 -0.1
 -0.3
 1.7
37 LOC4326700 uncharacterized LOC4326700 4326700 Os01g0222600 3.3 3.5
 3.1





38 LOC9268489 isochorismate synthase 1, chloroplastic 9268489 Os09g0361500 3.3 1.5
 5.0
 0.8
0.8
 2.0
1.4
 1.9
 0.2
 1.3
 1.4
39 LOC4326474 uncharacterized LOC4326474 4326474 3.3 4.2
 2.3





40 LOC9270533 uncharacterized LOC9270533 9270533 3.3 4.8
 1.7





41 LOC4349949 F-box/WD-40 repeat-containing protein At3g52030 4349949 Os11g0182400 3.3 3.6
 3.0
 -0.3
 2.3
 0.9
 -0.7
 1.2
 0.6
42 LOC4330344 uncharacterized LOC4330344 4330344 Os02g0684400 3.2 3.0
 3.4
 -0.5
 2.6
2.2
 0.2
-0.0
 -1.4
 -0.1
 2.1
2.1
43 LOC4328624 dehydrodolichyl diphosphate synthase complex subunit NUS1 4328624 Os02g0197700 3.2 1.7
 4.7
 0.9
 0.9
0.2
 0.3
 0.9
 0.3
 1.1
44 LOC4335704 trihelix transcription factor ASR3 4335704 Os04g0397500 3.2 2.4
 4.0
 1.0
 0.3
-0.4
 0.6
 -0.1
-0.8
 0.3
-0.1
 0.2
45 LOC4336886 thylakoid lumenal 29 kDa protein, chloroplastic 4336886 Os04g0602100 3.2 2.8
 3.5
 1.6
 0.8
-0.1
 1.3
 0.1
 0.1
 1.3
46 LOC4342770 glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic-like 4342770 OSNPB_070229800 3.2 2.7
 3.6
 1.9
 -0.2
 2.3
 0.5
 0.4
 0.6
47 LOC9272554 uncharacterized LOC9272554 9272554 3.2 3.7
 2.7





48 LOC4340333 putrescine hydroxycinnamoyltransferase 1-like 4340333 Os06g0184900 3.2 3.5
 2.9





49 LOC107280196 uncharacterized LOC107280196 107280196 Os02g0124800 3.2 4.1
0.7
 2.7
1.0
 1.1
0.3
 -0.5
-0.6
 1.1
0.3
 2.0
1.1
50 LOC4347046 uncharacterized LOC4347046 4347046 Os09g0413200 3.2 3.5
 2.8
 2.6
 1.1
0.8
 2.8
 -1.4
 0.7
 0.8
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