Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4350271   pentatricopeptide repeat-containing protein At2g37320 
 osa-r.5   4350271   pentatricopeptide repeat-containing protein At2g37320 
 osa-m.8   4350271   pentatricopeptide repeat-containing protein At2g37320 
 osa-u.4   4345023   pentatricopeptide repeat-containing protein At2g37320 
 ath-u.4   AT2G37320   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.4   100813915   pentatricopeptide repeat-containing protein At2g37320 
 sly-u.4   104649094   pentatricopeptide repeat-containing protein At2g37320-like 
 mtr-u.4   11435688   uncharacterized LOC11435688 

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Top 50 coexpressed genes to 4350271 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3040   Spliceosome  4 177 3.28
 osa785   Lipoic acid metabolism  1 5 -
 osa561   Glycerolipid metabolism  1 84 -
 osa3018   RNA degradation  2 112 -
 osa1240   Biosynthesis of cofactors  2 248 -

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osa:LOC4350271 (pentatricopeptide repeat-containing protein At2g37320) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4350271
osa-r.5
for
4350271
osa-m.8
for
4350271
osa-u.4
for
4345023
ath-u.4
for
AT2G37320
gma-u.4
for
100813915
sly-u.4
for
104649094
mtr-u.4
for
11435688
1 LOC4337871 putative protease Do-like 14 4337871 Os05g0158200 4.6 3.9
 5.3




2 LOC4341585 uncharacterized LOC4341585 4341585 Os06g0632700 4.5 5.0
 4.0
 3.1
2.7
 -0.1
 1.9
0.9
 1.9
1.0
 -0.2
-0.5
3 LOC4337362 zinc finger CCCH domain-containing protein 32-like 4337362 OSNPB_040671800 4.5 5.3
 3.7
 2.1
 -0.2
 0.5
-1.0
 1.2
0.5
 0.2
4 LOC4326191 uncharacterized LOC4326191 4326191 Os01g0549500 4.3 5.3
 3.3
 1.6
 -0.2
 -0.2
-1.2
 1.3
 0.1
5 LOC4350031 transcriptional corepressor SEUSS 4350031 Os11g0207000 4.3 6.0
3.3
3.2
 -0.5
 -0.0
-0.2
 1.6
0.9
 -0.3
-0.6
6 LOC4332056 uncharacterized LOC4332056 4332056 Os03g0214900 4.2 4.3
 4.1
 2.4
 1.3
 1.6
1.4
 1.1
7 LOC4339279 ubiquitin carboxyl-terminal hydrolase 25 4339279 Os05g0510300 4.2 6.2
 2.2
 2.5
 -0.1
 -0.1
-0.2
 0.9
 -0.5
8 LOC4345023 pentatricopeptide repeat-containing protein At2g37320 4345023 Os08g0238100 4.2 6.4
4.2



9 LOC4336155 protein FAR1-RELATED SEQUENCE 6 4336155 Os04g0476550 4.1 6.7
 1.6
 3.4



10 LOC4327782 RNA-binding KH domain-containing protein RCF3 4327782 Os01g0235800 4.1 4.6
 3.5
 2.5
1.5
0.4
 0.8
 1.0
11 LOC4324173 membrane-bound transcription factor site-2 protease homolog 4324173 Os01g0654200 4.0 5.2
 2.8
 3.1
 0.5
 1.2
 1.9
1.0
 -0.4
12 LOC4347889 protein HIRA-like 4347889 OSNPB_090567700 4.0 4.4
 3.7
 2.5
 0.3
 1.0
0.1
 1.0
 0.4
0.2
13 LOC4328024 DExH-box ATP-dependent RNA helicase DExH12 4328024 Os02g0107000 4.0 4.3
 3.7
 2.3
 -0.3
-0.5
 1.6
1.2
 0.3
-0.2
 1.2
-0.4
14 LOC4347347 uncharacterized LOC4347347 4347347 Os09g0473350 4.0 5.2
 2.8
 2.3
1.9
 1.1
 -1.3
 2.1
0.6
 -0.2
15 LOC4326720 shaggy-related protein kinase alpha 4326720 Os01g0296100 3.9 4.9
 2.9
 1.7
0.8
 0.4
0.2
 1.3
0.8
 1.8
1.3
 2.8
2.8
16 LOC4352794 septin and tuftelin-interacting protein 1 homolog 1 4352794 Os12g0615800 3.9 4.5
 3.3
 2.3
 1.3
-0.8
 0.1
0.1
 1.2
 -0.4
17 LOC4329421 uncharacterized LOC4329421 4329421 Os02g0502500 3.9 4.6
 3.1
 1.5
 1.8
 1.3
0.9
 0.3
-0.8
 0.3
18 LOC4350762 zinc finger CCHC domain-containing protein 7 4350762 Os11g0573200 3.8 4.3
 3.4
 2.3
 -0.0
 0.5
0.3
 1.2
0.6
 0.3
-0.0
19 LOC4350238 protein NLP2-like 4350238 Os11g0264300 3.8 3.9
 3.8
 2.8



20 LOC4326652 zinc finger CCCH domain-containing protein 8-like 4326652 OSNPB_010616400 3.7 3.4
 4.1
 2.0
 -0.7
 0.2
-0.4
 1.1
 0.6
21 LOC4328313 putative adagio-like protein 2 4328313 OSNPB_020150800 3.7 4.4
 3.0
 2.4
2.2
 0.8
-0.0
 1.4
1.0
 1.1
 0.5
22 LOC4330694 protease Do-like 9 4330694 Os02g0742500 3.6 5.7
 1.6
 2.2
0.5
 -0.2
 1.3
1.2
 2.1
0.9
 0.0
23 LOC4340263 zinc finger CCCH domain-containing protein 40-like 4340263 OSNPB_060170500 3.6 4.8
 2.4
 1.5
0.6
 1.3
-1.0
 -0.2
-0.2
 0.5
-0.4
 -0.4
24 LOC4332372 digalactosyldiacylglycerol synthase 2, chloroplastic 4332372 Os03g0268300 3.6 4.4
 2.7
 2.4
-0.2
 0.2
 0.2
-0.0
 -0.1
-0.4
 -1.2
-1.5
25 LOC4324294 uncharacterized LOC4324294 4324294 Os01g0974300 3.6 4.3
 2.9
 2.7
 0.5
 1.5
1.0
 0.4
 0.3
26 LOC4350380 uncharacterized LOC4350380 4350380 3.6 2.2
 4.9




27 LOC4347477 uncharacterized LOC4347477 4347477 Os09g0499600 3.5 3.3
 3.8
 2.2
0.3
 1.0
 0.0
-0.2
28 LOC9270665 protein PAT1 homolog 9270665 Os02g0295700 3.5 3.2
 3.8
 2.5
2.1



29 LOC4344771 cullin-3A 4344771 Os08g0170900 3.5 4.3
 2.7
 2.0
0.6
 0.4
-1.0
 0.7
0.4
 0.7
-0.2
 0.7
0.7
30 LOC4336023 lipoyl synthase, mitochondrial-like 4336023 OSNPB_040455800 3.5 2.9
 4.1
 1.8
 -0.7
 0.4
-0.3
 -1.1
 -0.1
31 LOC4339828 uncharacterized LOC4339828 4339828 Os06g0101000 3.5 4.9
 2.1
 4.2
0.5
 0.4
-0.1
 0.2
-0.0
 2.0
1.3
 0.9
0.2
32 LOC4333886 coatomer subunit alpha-2-like 4333886 OSNPB_030711500 3.5 2.8
 4.1
 1.2
1.0
 -0.2
-0.8
 1.3
0.9
 0.5
0.3
 0.3
0.2
33 LOC4348996 KH domain-containing protein HEN4 4348996 Os10g0495000 3.5 5.1
 1.8
 2.4
1.1

0.4
34 LOC4350450 uncharacterized LOC4350450 4350450 3.5 1.3
 5.6




35 LOC4331846 SAP-like protein BP-73 4331846 OSNPB_030183100 3.4 4.2
 2.7




36 LOC4325502 DExH-box ATP-dependent RNA helicase DExH6 4325502 Os01g0767700 3.4 3.9
 3.0
 2.0
 0.5
-1.1
 1.3
1.0
 0.7
 0.6
37 LOC4326190 DEAD-box ATP-dependent RNA helicase 40-like 4326190 OSNPB_010549400 3.4 3.7
 3.2
 3.7
1.7
 0.3
0.0
 -0.6
-0.7
 0.8
0.7
 0.5
0.3
38 LOC4336214 trihelix transcription factor GT-4 4336214 Os04g0486400 3.4 5.1
 1.8
 3.2
 0.8
 -0.7
-1.6
 1.8
 0.0
39 LOC4341995 uncharacterized LOC4341995 4341995 Os06g0704400 3.4 6.2
 0.6
 2.1
1.7

0.7
-0.3
40 LOC4349686 transmembrane protein 230 4349686 Os11g0132501 3.4 3.3
 3.5
 1.9
-0.8



41 LOC4340047 transcription initiation factor TFIID subunit 14b 4340047 Os06g0137300 3.4 3.7
 3.1
 1.6
 -0.1
-0.3
 2.1
1.3
 0.9
-0.1
 0.3
-0.7
42 LOC4340565 homeobox protein HAZ1-like 4340565 Os06g0229300 3.4 4.6
 2.2
 2.3
 0.4
 1.0
0.4
 1.5
 -0.5
43 LOC4334752 protein FAR1-RELATED SEQUENCE 6 4334752 Os03g0843700 3.4 5.1
 1.7
 3.5



44 LOC4324047 suppressor protein SRP40 4324047 Os01g0507500 3.4 3.6
 3.2
 1.9
 1.7
1.0
 -0.7
-0.8
 1.6
 -0.9
45 LOC4329976 protein TIC 20-I, chloroplastic 4329976 Os02g0614400 3.4 5.1
 1.7
 2.0
-0.5
0.8
0.8
 -0.2
-1.1
 -0.7
46 LOC4336051 cyclic pyranopterin monophosphate synthase, mitochondrial 4336051 Os04g0460500 3.4 3.5
 3.2
 1.3
 0.1
 1.1
 2.4
 0.5
0.3
47 LOC4344088 pre-mRNA-splicing factor SYF1 4344088 Os07g0644300 3.4 3.2
 3.6
 3.4
 0.2
 1.5
0.2
 2.0
 -0.1
48 LOC4324474 protein phosphatase 1 regulatory subunit SDS22 4324474 Os01g0966400 3.4 3.6
 3.2
 2.0
 0.0
 1.3
1.2
 2.1
 -0.5
49 LOC4328583 uncharacterized LOC4328583 4328583 Os02g0192200 3.4 4.3
 2.4
 3.1
2.7
 -0.1
 1.9
0.9
 1.9
1.0
 -0.2
-0.5
50 LOC4332959 KH domain-containing protein At4g18375 4332959 Os03g0376800 3.4 4.1
 2.6
 0.5
 0.1
-0.5
 0.8
0.5
 1.3
0.6
 0.7
0.1
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