Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4350870   F-box/kelch-repeat protein SKIP11 
 osa-r.5   4350870   F-box/kelch-repeat protein SKIP11 
 osa-m.8   4350870   F-box/kelch-repeat protein SKIP11 
 osa-u.4   4331777   F-box/kelch-repeat protein At1g74510 
 osa-u.4   4330727   F-box/kelch-repeat protein At1g74510 
 ath-u.4   AT1G74510   Galactose oxidase/kelch repeat superfamily protein 
 ath-u.4   AT1G26930   Galactose oxidase/kelch repeat superfamily protein 
 ath-u.4   AT1G14330   Galactose oxidase/kelch repeat superfamily protein 
 gma-u.4   100818865   F-box/kelch-repeat protein At1g26930 
 gma-u.4   100788507   F-box/kelch-repeat protein At1g74510 
 sly-u.4   101257964   F-box/kelch-repeat protein At1g26930 
 sly-u.4   101249448   F-box/kelch-repeat protein At1g74510 
 sly-u.4   101246126   F-box/kelch-repeat protein SKIP11 
 ppo-u.4   18105800   F-box/kelch-repeat protein At1g74510 
 mtr-u.4   25502729   F-box/kelch-repeat protein At1g26930 

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Top 50 coexpressed genes to 4350870 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa740   Riboflavin metabolism  1 21 -
 osa770   Pantothenate and CoA biosynthesis  1 38 -
 osa410   beta-Alanine metabolism  1 44 -
 osa330   Arginine and proline metabolism  1 58 -
 osa3015   mRNA surveillance pathway  2 115 -

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osa:LOC4350870 (F-box/kelch-repeat protein SKIP11) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4350870
osa-r.5
for
4350870
osa-m.8
for
4350870
osa-u.4
for
4331777
osa-u.4
for
4330727
ath-u.4
for
AT1G74510
ath-u.4
for
AT1G26930
ath-u.4
for
AT1G14330
gma-u.4
for
100818865
gma-u.4
for
100788507
sly-u.4
for
101257964
sly-u.4
for
101249448
sly-u.4
for
101246126
ppo-u.4
for
18105800
mtr-u.4
for
25502729
1 LOC4331777 F-box/kelch-repeat protein At1g74510 4331777 Os03g0171600 5.1 4.6
 5.7
 8.9
5.1
 8.9
3.1
 3.6
3.4
 4.0
3.6
 5.7
3.3
 14.5
8.6
 7.9
2.6
 4.5
1.1
 1.1
0.0
 4.5
0.0
4.8
2 LOC4339266 jacalin-related lectin 3 4339266 Os05g0508400 4.7 5.2
 4.1
 3.3
2.4
 1.8
1.0
 -0.3
 0.0
 -0.8
 1.0
0.6
 1.6
1.3
 -0.1
-0.6
 0.1
-0.6
 0.3
-0.2
 0.7
0.3
 -0.6
-1.5
3 LOC4332145 probable inactive poly [ADP-ribose] polymerase SRO2 4332145 Os03g0230300 3.7 2.9
 4.6
 1.4
 1.6
 0.2
0.1
 0.3
-0.3
 1.1
0.4
 3.2
2.6
 0.4
-0.2
 1.3
0.3
 0.2
0.0
 1.0
0.8
 1.3
0.2
 2.4
0.2
4 LOC4331096 casein kinase I 4331096 Os02g0810400 3.7 3.7
 3.8
 2.7
0.1
 2.1
0.4
 1.9
1.8
 1.7
1.6
 3.1
3.0
 2.4
2.2
 3.2
1.8
 1.7
1.2
 1.7
-0.2
 0.5
0.5
 1.9
1.9
 1.8
1.2
5 LOC4342515 casein kinase 1-like protein HD16 4342515 Os07g0171300 3.6 3.3
 3.8
 2.3
1.4
 0.8
0.5
 2.9
1.5
 0.6
0.1
 0.6
0.1
 2.1
1.7
 1.9
1.6
 1.9
1.6
 0.5
0.5
 0.0
-0.7
 0.9
0.5
 2.1
1.9
6 LOC4350639 nudix hydrolase 13, mitochondrial 4350639 Os11g0531700 3.6 4.0
 3.1
 2.7
-0.4
 0.7
0.6
 0.7
0.3
 2.8
1.5
 0.1
0.0
 1.3
0.9
 1.0
-0.2


0.4
 -0.8
7 LOC4348134 peptidyl-prolyl cis-trans isomerase 4348134 Os10g0154700 3.5 3.7
 3.4
 2.4
1.9
 3.4
1.4
 1.8
1.4
 0.7
0.2
 0.1
-0.2
 2.0
0.7
 1.1
1.0
 1.1
0.9
 -0.6
-1.2
 0.0
-0.2
 0.4
0.4
 -0.7
-0.9
8 LOC4330770 probable pectin methyltransferase QUA2 4330770 Os02g0755000 3.5 4.3
 2.8
 2.6
 2.1
 0.5
 0.6
 2.2
 2.7
1.7
 0.6
0.1
 1.1
 0.7
 2.0
 1.5
0.6
 1.8
1.0
9 LOC4350986 heterogeneous nuclear ribonucleoprotein 1 4350986 Os11g0637700 3.5 4.5
 2.5
 1.8
1.2
 1.4
1.0
 4.2
2.7
 1.4
0.3
 2.9
-0.3
 1.7
1.6
 1.4
0.8
 1.7
1.4
 0.7
0.2
 1.5
1.3
 1.7
1.7
 2.2
1.3
10 LOC4349773 uncharacterized LOC4349773 4349773 Os11g0148400 3.5 3.4
 3.5
 1.8
 1.7
 0.6
 0.4
 -0.2
 4.7
1.8
 0.6
0.6
 2.2
 -1.4
 0.5
 0.7
0.3
 1.6
11 LOC4330003 E3 ubiquitin-protein ligase WAV3 4330003 Os02g0619600 3.4 3.6
 3.1
 2.2
1.4
 0.9
0.6
 2.0
0.6
 0.5
0.3
 2.8
-0.6
 2.2
2.1
 2.4
0.8
 1.7
0.9
 0.3
-1.3
 0.9
0.2
 1.0
-0.2
 1.7
0.9
12 LOC4343641 zinc finger CCCH domain-containing protein 50-like 4343641 OSNPB_070568300 3.4 3.3
 3.5
 5.3
 4.1









13 LOC4331563 uncharacterized LOC4331563 4331563 Os03g0139200 3.3 3.7
 3.0
 2.4
 1.3
 1.9
0.1
 0.9
0.3
 1.1
0.3
 1.1
0.6
 2.8
1.8
 1.8
 -0.3
 1.8
 0.5
-0.4
 0.1
14 LOC4333586 protein AMEIOTIC 1 homolog 4333586 Os03g0650400 3.2 3.0
 3.4
 2.2
-0.6
 2.4
0.0
 -2.0
 -0.4
 -1.8
 -0.3
-0.7
 -0.4
-0.6


1.0
-1.0
 0.1
15 LOC4327888 jacalin-related lectin 3 4327888 Os01g0775500 3.2 3.5
 2.9
 3.3
2.4
 1.8
1.0
 -0.3
 0.0
 -0.8
 1.0
0.6
 1.6
1.3
 -0.1
-0.6
 0.1
-0.6
 0.3
-0.2
 0.7
0.3
 -0.6
-1.5
16 LOC4345840 ubiquitin carboxyl-terminal hydrolase 17 4345840 Os08g0478566 3.1 4.4
 1.9
 2.1
0.4
 1.1
-0.5
 0.9
0.7
 0.1
-0.8
 0.8
0.2
 1.7
1.3
 1.5
1.3
 1.8
 -0.6
 0.6
 0.0
-0.8
 3.0
1.7
17 LOC4328313 putative adagio-like protein 2 4328313 OSNPB_020150800 3.1 3.2
 3.1
 2.5
1.2
 1.1
0.1
 0.9
0.4
 -0.1
-0.8
 1.2
0.3
 1.3
1.3
 1.8
1.3
 1.8
 0.7
 -0.9
 2.2
2.0
 1.4
18 LOC4330727 F-box/kelch-repeat protein At1g74510 4330727 Os02g0748300 3.1 1.9
 4.2
 8.9
5.1
 8.9
3.1
 3.6
3.4
 4.0
3.6
 5.7
3.3
 14.5
8.6
 7.9
2.6
 4.5
1.1
 1.1
0.0
 4.5
0.0
4.8
19 LOC4347974 transmembrane 9 superfamily member 2 4347974 Os10g0112600 3.1 3.1
 3.0
 2.2
1.3
 3.4
0.8
 2.6
2.6
 0.2
0.1
 0.9
0.7
 0.5
0.4
 1.3
1.3
 1.2
1.0
 -1.5
-1.8
 1.3
0.4
 1.3
0.7
 1.2
0.9
20 LOC4341761 probable serine/threonine-protein kinase PBL17 4341761 Os06g0663200 3.1 3.8
 2.3
 4.6
 4.9
 -0.6
 0.8
 0.9
 0.5
-0.2
 0.5
0.2
 1.4
-0.5
 1.9
-1.2
 0.9
-1.3
 0.9
-0.6
 0.5
21 LOC4338004 protein CHUP1, chloroplastic 4338004 Os05g0185800 3.1 3.1
 3.0
 2.1
 0.7
 2.1
 2.1
 0.2
 2.3
1.7
 2.3
1.3
 0.2
-0.2
 1.4
0.9
 0.5
0.0
 0.6
0.3
 1.4
0.1
22 LOC4329537 neutral/alkaline invertase 3, chloroplastic-like 4329537 OSNPB_020529400 3.0 3.6
 2.4
 1.9
0.5
 1.2
-0.2
 0.4
 -0.6
 -0.1
 0.7
0.1
 0.5
-0.1
 -0.2
-0.3
 1.8
0.3
 0.8
-0.7
 1.0
0.9
 0.7
23 LOC4330057 uncharacterized LOC4330057 4330057 Os02g0631200 3.0 3.6
 2.5
 2.0
0.7
 1.1
0.8
 1.1
0.4
 1.8
-0.5
 2.0
-0.4
 -0.2
-0.4
 0.7
0.7
 -1.5
-1.7
 3.5
2.3
 -0.5
-1.9
 -0.9
-1.6
 0.3
-0.1
24 LOC4324195 uncharacterized LOC4324195 4324195 Os01g0580800 3.0 2.6
 3.4
 1.4
 1.2









25 LOC4339288 serine/threonine-protein kinase tricorner 4339288 Os05g0511400 3.0 3.5
 2.5
 4.2
1.6
 2.8
0.7
 1.6
1.0
 0.2
0.0
 1.6
0.9
 1.2
0.9
 1.5
1.1
 1.9
-0.4
 -0.7
-0.8
 1.1
0.1
 0.3
0.1
 2.4
2.3
26 LOC4329499 protein BONZAI 1 4329499 Os02g0521300 3.0 4.9
 1.1
 1.5
1.3
 1.8
1.8
 -0.2
-0.6
 0.4
-0.6
 1.5
0.1
 0.3
-0.1
 0.6
-0.2
 1.3
1.3
 0.3
-1.0
 0.2
-0.5
 0.3
0.2
 2.4
27 LOC4332287 probable E3 ubiquitin-protein ligase LOG2 4332287 Os03g0254900 3.0 3.5
 2.4
 2.7
0.8
 1.2
0.0
 0.5
0.1
 1.6
1.4
 -0.1
-0.6
 2.3
1.8
 2.8
2.2
 1.1
-0.0
 2.9
-0.3
 0.6
-0.0
 -0.9
-1.1
 2.1
1.0
28 LOC4330498 early nodulin-75 4330498 Os02g0711900 3.0 3.1
 2.8
 2.8
 1.2









29 LOC4343665 protein TIME FOR COFFEE 4343665 Os07g0571100 3.0 3.3
 2.6
 3.2
 1.1
 -0.9
 -0.5
 -1.4
 1.9
1.5
 1.2
0.7
 1.3
 -1.1
 0.4
 1.4
0.6
 0.2
30 LOC4333125 putative G3BP-like protein 4333125 Os03g0418800 3.0 2.7
 3.2
 1.6
 2.1









31 LOC4336207 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 4336207 Os04g0485100 3.0 3.8
 2.1
 2.6
0.4
 0.2
-0.2
 2.4
1.5
 0.6
-0.7
 2.4
2.2
 2.3
2.1
 2.6
2.4
 1.5
1.4
 2.4
1.1
 1.4
0.5
 2.4
1.7
 3.2
1.4
32 LOC4347794 SRSF protein kinase 2 4347794 Os09g0552300 3.0 3.8
 2.1
 2.4
1.4
 2.4
-0.6
 2.6
2.0
 1.2
1.1
 2.6
1.9
 2.9
1.0
 2.8
2.3
 1.8
 0.9
 1.8
 0.7
0.5
 2.4
-0.3
33 LOC4345891 E3 ubiquitin-protein ligase CIP8 4345891 Os08g0487500 2.9 3.4
 2.4
 2.4
2.1
 2.3
1.9
 1.8
1.6
 2.1
1.3
 5.3
2.1
 1.7
1.4
 2.5
2.0
 2.9
2.1
 2.2
-0.4
 1.4
0.8
 0.7
0.3
 1.1
1.0
34 LOC4329091 eukaryotic translation initiation factor 1A 4329091 Os02g0300700 2.9 1.2
 4.6
 1.6
 -0.0
 0.9
 -1.2
 0.1
 1.6
1.1
 1.2
1.0
 -0.7
-1.1
 -1.6
-2.0
 0.2
-0.2
 0.2
0.1
 0.5
-0.5
35 LOC4325283 YTH domain-containing family protein 2 4325283 Os01g0679900 2.9 2.0
 3.8
 3.1
 1.9
 -0.5
-1.2
 -0.3
-2.1
 -0.1
-0.1
 2.7
1.1
 3.2
3.1
 -0.5
 1.3
 0.8
 -0.1
-0.6
 1.7
0.2
36 LOC9268727 probable protein phosphatase 2C 47 9268727 Os10g0541200 2.9 3.4
 2.4
 2.1
 2.0
 1.7
1.2
 1.1
0.4
 2.8
2.6
 1.7
 1.8
 0.3
-0.4
 0.7
-0.5
 1.3
-0.5
 1.3
0.3
 0.5
37 LOC4352863 ATP-dependent RNA helicase DEAH12, chloroplastic 4352863 Os12g0631200 2.9 3.0
 2.8
 1.5
 1.1
 3.7
 1.6
 0.5
 1.5
0.7
 2.9
2.1
 0.3
 -0.9
 0.8
 0.8
-0.0
 2.3
38 LOC4334905 uncharacterized LOC4334905 4334905 Os04g0105100 2.9 2.1
 3.7
 2.5
 2.0









39 LOC4352459 auxilin-related protein 1 4352459 Os12g0548200 2.9 3.1
 2.7
 2.5
2.5
 1.4
0.7
 2.1
1.8
 1.0
0.8
 1.7
1.1
 1.7
1.4
 1.4
1.2
 1.6
1.6
 0.6
-1.2
 1.4
0.4
 1.3
0.7
 2.5
2.0
40 LOC4337359 probable polyamine oxidase 2 4337359 Os04g0671200 2.9 3.2
 2.6
 5.8
0.2
 4.4
0.7
 2.8
 -1.2
 2.8
 2.9
2.4
 0.7
0.6
 3.3
0.3
 0.9
-0.5
 2.6
-0.0
 -0.1
-0.4
 0.5
41 LOC4332195 purple acid phosphatase 3 4332195 Os03g0238600 2.9 1.7
 4.0
 2.1
0.2
 1.5
-0.0
 0.6
0.3
 0.6
-0.1
 1.1
0.6
 2.4
2.0
 2.0
1.9
 -0.0
-0.2
 -0.2
-0.9
 0.4
0.2
 0.8
0.5
 0.0
-0.3
42 LOC4349338 oxysterol-binding protein-related protein 2A 4349338 Os10g0554100 2.9 2.9
 2.8
 5.6
0.5
 3.8
-0.2
 0.9
0.6
 1.4
1.1
 1.6
0.5
 0.7
0.4
 0.3
0.0
 1.0
 -1.0
 0.1
 0.1
-0.2
 1.1
43 LOC4347808 protein PIN-LIKES 7 4347808 Os09g0554300 2.8 2.5
 3.1
 1.2
0.3
 1.6
-0.4
 -0.3
-0.8
 0.2
0.1
 1.0
-0.3
 3.1
2.4
 0.3
0.2
 2.4
 -1.5
 1.5
 -0.8
 0.5
0.4
44 LOC4345939 chloride channel protein CLC-f 4345939 Os08g0499200 2.8 3.8
 1.8
 2.1
2.0
 1.9
0.7
 2.5
 0.8
 2.6
 3.3
2.5
 3.5
2.8
 1.7
0.3
 0.7
-1.3
 0.0
0.0
 -0.1
 2.8
45 LOC4332438 ABC transporter B family member 20 4332438 Os03g0280000 2.8 3.5
 2.1
 3.9
-0.0
 2.8
0.5
 0.9
-0.3
 -1.1
-1.5
 2.6
-0.1
 3.3
3.0
 2.0
1.8
 2.2
 -1.3
 0.9
 1.1
0.4
 4.9
3.3
46 LOC9267486 dof zinc finger protein 1-like 9267486 OSNPB_040567800 2.8 2.9
 2.7
 2.8
2.3
 1.5
1.2









47 LOC4324515 uncharacterized LOC4324515 4324515 Os01g0149900 2.8 3.4
 2.2
 1.9
 2.0









48 LOC4327517 copper transport protein CCH 4327517 Os01g0826000 2.8 2.5
 3.0
 1.5
 0.4
 0.1
 -0.2
 1.1
 -0.0
 0.2
 -0.4
 1.2
 -0.1
 -2.0
 -0.6
49 LOC4324710 casein kinase 1-like protein HD16 4324710 Os01g0772600 2.8 3.4
 2.2
 2.3
1.4
 0.8
0.5
 2.9
1.5
 0.6
0.1
 0.6
0.1
 2.1
1.7
 1.9
1.6
 1.9
1.6
 0.5
0.5
 0.0
-0.7
 0.9
0.5
 2.1
1.9
50 LOC4335947 uncharacterized LOC4335947 4335947 Os04g0443700













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