Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4351389   regulation of nuclear pre-mRNA domain-containing protein 2 
 osa-r.5   4351389   regulation of nuclear pre-mRNA domain-containing protein 2 
 osa-m.8   4351389   regulation of nuclear pre-mRNA domain-containing protein 2 
 osa-u.4   4349670   regulation of nuclear pre-mRNA domain-containing protein 2 
 gma-u.4   100791478   wiskott-Aldrich syndrome protein homolog 1 
 gma-u.4   100800067   regulation of nuclear pre-mRNA domain-containing protein 1A 
 sly-u.4   101266382   regulation of nuclear pre-mRNA domain-containing protein 1A-like 
 mtr-u.4   11427699   regulation of nuclear pre-mRNA domain-containing protein 1A 
 mtr-u.4   11435944   regulation of nuclear pre-mRNA domain-containing protein 1A 

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Top 50 coexpressed genes to 4351389 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3420   Nucleotide excision repair  2 52 2.27
 osa3020   RNA polymerase  1 55 -
 osa3008   Ribosome biogenesis in eukaryotes  2 90 -
 osa3013   Nucleocytoplasmic transport  2 109 -
 osa3018   RNA degradation  2 112 -

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osa:LOC4351389 (regulation of nuclear pre-mRNA domain-containing protein 2) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4351389
osa-r.5
for
4351389
osa-m.8
for
4351389
osa-u.4
for
4349670
gma-u.4
for
100791478
gma-u.4
for
100800067
sly-u.4
for
101266382
mtr-u.4
for
11427699
mtr-u.4
for
11435944
1 LOC4349670 regulation of nuclear pre-mRNA domain-containing protein 2 4349670 Os11g0130100 6.3 8.9
6.3
 7.2
 7.2
1.8
 1.8
2 LOC4336176 SWI/SNF complex subunit SWI3A 4336176 Os04g0480400 5.8 4.6
 7.0
 3.2
 1.8
1.0
 1.9
1.2
 1.8
 2.1
 3.5
3 LOC4326907 transcription factor TGA2.3-like 4326907 Os01g0279900 5.6 4.0
 7.2
 2.9
0.9
 3.2
3.1
 2.3
2.0
 2.7
1.8
 1.5
0.8
 3.5
3.0
4 LOC4334849 protein EXPORTIN 1A 4334849 Os03g0858100 5.4 5.5
 5.3
 3.4
 3.5
3.5
 1.9
1.4
 0.7
 2.5
1.7
 1.7
0.2
5 LOC4327984 kinesin-like protein KIN-6 4327984 Os02g0101800 5.0 5.1
 4.9
 0.9
 1.4
 0.5
 1.2
 0.0
 -0.1
6 LOC4334454 uncharacterized LOC4334454 4334454 Os03g0800800 5.0 4.2
 5.7
 3.0
2.1
 1.2
0.4
 0.9
-0.5
 3.5
1.1
 1.6
 1.9
7 LOC4352173 nuclear pore complex protein NUP1 4352173 Os12g0456400 4.9 3.9
 5.9
 3.2
 5.6
5.6
 5.8
5.3
 5.3
4.7
 7.4
3.5
 2.9
1.7
8 LOC4338362 transcription factor IIIB 60 kDa subunit 4338362 Os05g0305100 4.7 5.3
 4.1
 2.1
 2.0
1.5
 2.5
1.8
 2.6
-0.9
 0.6
-0.6
 -0.1
-0.6
9 LOC4333925 E3 SUMO-protein ligase SIZ2-like 4333925 OSNPB_030719100 4.7 4.7
 4.7
 2.3




10 LOC4340435 uncharacterized LOC4340435 4340435 Os06g0206200 4.6 4.8
 4.5
 3.3
 6.5
6.3
 3.5
3.2
 2.4
 2.6
 4.4
11 LOC4344297 E3 ubiquitin-protein ligase SHPRH 4344297 Os07g0680500 4.5 4.7
 4.4
 2.2
 1.0
 2.0
 2.7
 2.2
 1.6
12 LOC9272156 uncharacterized LOC9272156 9272156 4.5 4.7
 4.3





13 LOC4345436 putative uncharacterized protein DDB_G0271606 4345436 Os08g0379000 4.5 4.8
 4.2
 3.4
2.1
 1.5
1.3
 2.6
2.4
 3.3
2.4
 2.8
1.0
 3.7
2.8
14 LOC4342472 histone deacetylase 15 4342472 Os07g0164100 4.5 3.6
 5.3
 2.6
 0.9
0.2
 1.9
1.0
 3.0
 0.8
 0.9
15 LOC4330529 clustered mitochondria protein 4330529 Os02g0717400 4.5 4.3
 4.6
 2.5
 2.5
2.2
 2.9
2.3
 1.5
 2.6
 -0.2
16 LOC4334103 YTH domain-containing family protein 2 4334103 Os03g0748000 4.5 4.6
 4.3
 2.3
1.3
 2.2
1.9
 2.0
1.6
 3.5
 2.0
 3.0
17 LOC4346622 uncharacterized LOC4346622 4346622 Os09g0284600 4.4 2.9
 5.8
 3.0
2.3
 4.7
4.6
 3.7
3.3
 3.2
2.2
 1.2
 1.4
18 LOC4333696 uncharacterized LOC4333696 4333696 Os03g0672700 4.3 6.0
 2.7
 2.9
 2.7
1.3
 4.5
2.8
 1.2
 2.3
1.3
 2.6
1.6
19 LOC4350032 transcriptional corepressor SEUSS 4350032 Os11g0207100 4.3 3.9
 4.7
 3.1
2.8
 4.9
4.5
 7.4
6.9
 4.1
4.0
 2.4
2.3
 4.7
4.2
20 LOC4341097 uncharacterized LOC4341097 4341097 Os06g0495700 4.3 4.8
 3.8
 2.2
 2.6
2.5
 4.0
3.2
 3.5
 1.4
 4.6
21 LOC4337145 regulation of nuclear pre-mRNA domain-containing protein 1A 4337145 Os04g0636700 4.3 3.7
 5.0
 2.5
 3.4
3.4
 2.6
1.9
 2.4
 1.0
 2.2
22 LOC4340450 uncharacterized LOC4340450 4340450 Os06g0209300 4.3 5.7
 2.9
 2.8
2.4
 2.1
2.0
 3.4
2.9
 2.6
 2.7
 1.2
23 LOC4343385 DEAD-box ATP-dependent RNA helicase 32-like 4343385 OSNPB_070517000 4.3 4.0
 4.5
 2.7
 0.7
0.7
 0.9
-0.5
 2.4
 1.0
-0.2
 1.0
-1.3
24 LOC4324977 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 4324977 Os01g0906600 4.3 4.0
 4.5
 3.3
 1.3
0.3
 2.0
1.5
 1.6
 0.2
 4.8
25 LOC4346059 pumilio homolog 5 4346059 Os08g0519800 4.2 4.5
 4.0
 3.4
0.9
 3.3
3.3
 2.8
2.4
 1.3
 1.4
 4.0
26 LOC4345198 ubiquitin-like domain-containing protein CIP73 4345198 Os08g0295100 4.2 5.6
 2.9
 2.2
 2.0
 2.4
 2.9
 1.9
 6.2
27 LOC4337785 serine/threonine-protein phosphatase BSL1 homolog 4337785 OSNPB_050144400 4.2 4.7
 3.6
 2.4
 4.4
3.9
 4.1
3.3
 1.7
 2.9
 1.7
28 LOC4327230 regulation of nuclear pre-mRNA domain-containing protein 1A 4327230 Os01g0925100 4.2 4.8
 3.5
 2.8
 5.5
5.3
 4.7
3.6
 4.7
 3.6
 1.7
29 LOC9270404 ubiquitin carboxyl-terminal hydrolase 12 9270404 Os11g0573000 4.2 4.7
 3.6
 2.7
2.0
 6.1
4.8
 6.8
4.5
 1.6
1.5
 2.4
2.0
 4.5
2.9
30 LOC4331367 uncharacterized LOC4331367 4331367 Os03g0111800 4.2 3.0
 5.3
 2.7
 1.7
 1.9
 2.0
 2.5
 0.4
31 LOC4329936 mitochondrial proton/calcium exchanger protein 4329936 Os02g0608400 4.2 3.6
 4.7
 3.0
1.4
 2.2
1.4
 3.0
1.9
 -0.8
-0.8
 1.5
-0.6
 -0.7
-1.1
32 LOC4328686 probable splicing factor, arginine/serine-rich 6 4328686 Os02g0208200 4.2 3.8
 4.6
 2.1
 1.4
0.8
 1.3
0.1
0.6
 0.8
33 LOC4334159 uncharacterized LOC4334159 4334159 Os03g0756700 4.1 5.3
3.0




34 LOC4339638 uncharacterized LOC4339638 4339638 Os05g0566900 4.1 4.5
 3.7
 3.4
2.1
 5.4
5.0
 4.8
4.1
 7.1
1.6
 3.3
 5.7
35 LOC9266524 SWI/SNF complex subunit SWI3C 9266524 Os12g0176700 4.1 4.1
 4.1
 2.3
1.6
 2.7
2.2
 4.2
2.8
 4.5
 2.4
 1.6
36 LOC4336589 E3 ubiquitin-protein ligase BRE1-like 1 4336589 OSNPB_040550400 4.1 3.6
 4.6
 2.1
 4.1
3.3
 6.0
4.7
 1.6
 1.8
 0.5
37 LOC9268125 DNA-directed RNA polymerase III subunit RPC5 9268125 Os08g0268900 4.1 4.8
2.5
 3.3
 1.4
 2.3
0.4
 1.7
 -0.3
38 LOC4338689 cyclin-dependent kinase D-1-like 4338689 OSNPB_050392300 4.1 3.7
 4.5
 2.3
 1.9
1.5
 1.3
0.7
 -0.2
 1.8
 0.1
39 LOC4346207 uncharacterized LOC4346207 4346207 Os08g0543600 4.1 4.3
 3.8
 2.3
 3.5
3.1
 4.5
3.5
 4.2
 2.6
 0.9
40 LOC4330371 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 4330371 Os02g0689800 4.1 3.8
 4.3
 2.5
 5.3
4.1
 6.4
5.5
 2.8
 2.3
 4.1
41 LOC4339802 chromatin modification-related protein EAF1 B 4339802 Os05g0593550 4.1 4.3
 3.8
 2.2
1.6
 6.3
5.4
 8.3
7.4
 4.6
4.4
 2.7
0.3
 3.6
1.3
42 LOC4324952 5'-3' exoribonuclease 3 4324952 Os01g0872700 4.1 4.7
 3.4
 3.6
 3.8
3.8
 4.6
4.4
 5.0
0.9
 3.6
-1.0
 2.5
-0.1
43 LOC4346673 mediator of RNA polymerase II transcription subunit 25 4346673 Os09g0306700 4.0 4.6
 3.5
 2.7
 9.3
7.5
 6.7
4.3
 4.0
 3.0
2.6
 2.3
1.7
44 LOC9270208 protein RRP6-like 2 9270208 Os10g0437200 4.0 3.5
 4.5
 2.1
1.5
 5.0
3.3
 3.9
2.1
 1.5
 2.5
1.8
 1.8
1.6
45 LOC4349371 uncharacterized LOC4349371 4349371 Os10g0559700 4.0 5.1
 2.9
 2.5
 4.5
4.5
 6.2
5.6
 2.1
 2.2
1.9
 3.3
3.0
46 LOC9269497 importin-4 9269497 Os03g0261950 4.0 3.9
 4.2
 1.2
 2.2
1.1
 2.4
1.9
 -0.8
 2.3
 0.3
47 LOC4327886 TNF receptor-associated factor homolog 1a 4327886 Os01g0775300 4.0 5.6
 2.4
 3.3




48 LOC9266838 far upstream element-binding protein 1 9266838 Os08g0110800 4.0 5.1
2.2
 4.5
3.4
 4.8
4.4
 4.1
 3.6
2.1
 4.4
1.8
49 LOC4350754 replication factor C subunit 1-like 4350754 OSNPB_110572100 4.0 4.2
 3.7
 1.8
 1.6
1.6
 1.3
0.4
 1.9
 1.5
 0.4
50 LOC4350684 HIRA-interacting protein 3 4350684 Os11g0544600 4.0 3.6
 4.4
 2.5
 1.3
0.7
 1.2
1.1
 1.8
 0.6
 0.7
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