Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4351479   protein TRAUCO 
 osa-r.5   4351479   protein TRAUCO 
 osa-m.8   4351479   protein TRAUCO 
 osa-u.4   4349761   protein TRAUCO 
 ath-u.4   TRO   TRAUCO 
 gma-u.4   100816796   protein TRAUCO 
 gma-u.4   100796715   protein TRAUCO 
 sly-u.4   101243859   protein TRAUCO 
 ppo-u.4   7485742   protein TRAUCO 
 ppo-u.4   7482332   protein TRAUCO 
 mtr-u.4   11442855   protein TRAUCO 

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Top 50 coexpressed genes to 4351479 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3040   Spliceosome  3 177 2.21
 osa750   Vitamin B6 metabolism  1 13 -
 osa900   Terpenoid backbone biosynthesis  1 56 -
 osa3008   Ribosome biogenesis in eukaryotes  1 90 -
 osa1240   Biosynthesis of cofactors  1 248 -

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osa:LOC4351479 (protein TRAUCO) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4351479
osa-r.5
for
4351479
osa-m.8
for
4351479
osa-u.4
for
4349761
ath-u.4
for
TRO
gma-u.4
for
100816796
gma-u.4
for
100796715
sly-u.4
for
101243859
ppo-u.4
for
7485742
ppo-u.4
for
7482332
mtr-u.4
for
11442855
1 LOC4336289 uncharacterized LOC4336289 4336289 Os04g0497900 5.1 3.5
 6.7
 1.9
 -0.8
 1.2
 0.8
 2.8
 1.1
 2.0
 4.3
2 LOC4330260 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic 4330260 Os02g0668100 4.8 3.4
 6.2
 2.4
 -1.0
 3.1
 1.8
 1.0
 0.5
 2.1
 1.0
3 LOC9271668 uncharacterized LOC9271668 9271668 Os09g0491676 4.5 4.5
 4.4
 3.1
1.8
 3.0
 2.4
1.5
 2.3
1.9
 0.3
 1.5
0.9
 2.8
1.5
 3.1
4 LOC4339430 pentatricopeptide repeat-containing protein At3g49240, mitochondrial 4339430 Os05g0534000 4.2 2.9
 5.5
 3.5
2.9
5.6
5.4
 5.0
5.0
 2.7
 1.5
 3.3
 2.1
2.0
5 LOC4336650 lysine-specific histone demethylase 1 homolog 3 4336650 Os04g0560400 4.2 2.9
 5.5
 5.0
 3.2
 2.5
 2.4
 1.8
 2.0
1.8
 3.9
3.3
 3.2
6 LOC4346577 sufE-like protein 1, chloroplastic/mitochondrial 4346577 Os09g0270900 4.1 3.7
 4.6
 0.6
-0.1
4.4
 4.0
 0.7
 -0.2
-0.2
 0.4
0.4
 0.8
7 LOC4346468 protein CLMP1 4346468 Os09g0135400 3.9 2.6
 5.1
 2.8
 0.3
 3.0
2.0
 2.8
1.5
 0.2
-0.1
 1.0
0.5
 1.7
0.1
 2.1
8 LOC4349135 mitochondrial import inner membrane translocase subunit TIM23-2 4349135 Os10g0519700 3.8 2.4
 5.1
 1.6
1.5
 2.4
2.2
 3.6
3.4
 3.2
3.0
 2.2
1.5
 2.6
1.3
 2.5
2.5
 2.7
1.5
9 LOC4340875 atherin 4340875 Os06g0316100 3.7 3.9
 3.6
 3.4






10 LOC4333673 uncharacterized LOC4333673 4333673 Os03g0668000 3.7 1.6
 5.9
 1.7
0.7






11 LOC4325295 uncharacterized LOC4325295 4325295 Os01g0698000 3.7 4.0
 3.4







12 LOC4328057 uncharacterized LOC4328057 4328057 Os02g0113800 3.7 2.8
 4.6







13 LOC4329163 WD repeat-containing protein 25 4329163 Os02g0319800 3.7 1.7
 5.6
 3.2
 0.2
 0.3
0.2
 -0.0
-0.1
 2.5
 -0.6
 -0.3
 0.5
14 LOC4335638 SWI/SNF complex component SNF12 homolog 4335638 Os04g0382100 3.7 2.0
 5.4
 4.8
 3.2
2.6
 2.8
2.8
 3.9
3.3
 1.0
0.6
 0.1
-0.1
 0.4
0.3
 4.5
1.4
15 LOC4327681 glycylpeptide N-tetradecanoyltransferase 1 4327681 Os01g0708100 3.7 3.0
 4.3
 4.4
 1.7
 1.2
1.2
 0.9
0.8
 -0.4
-2.5
 0.7
0.0
 0.5
-0.4
 3.2
1.8
16 LOC4346451 uncharacterized LOC4346451 4346451 3.7 3.0
 4.3







17 LOC4345928 nuclear transcription factor Y subunit C-6-like 4345928 Os08g0496500 3.7 2.4
 4.9
 4.1
3.0
 1.5
1.0
 2.6
2.4
 2.2
1.7
 1.6
0.3
 1.4
1.3
 1.4
1.2
 0.4
-0.0
18 LOC4333766 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog 4333766 Os03g0688200 3.7 2.0
 5.3
 2.9
 1.6
 6.6
4.8
 5.0
4.9
 0.5
-0.5
 2.4
1.7
 5.1
3.0
 0.4
19 LOC4331979 dual-specificity RNA methyltransferase RlmN 4331979 Os03g0202300 3.6 3.1
 4.2
 2.1
 1.6
 2.3
 1.4
 1.3
 0.1
 0.6
 3.6
20 LOC4342162 probable pyridoxal 5'-phosphate synthase subunit PDX1.1 4342162 OSNPB_070100200 3.6 3.9
 3.3
 2.2
0.7
 1.3
0.4
 2.9
2.1
 2.7
2.7
 -1.8
 -1.0
-1.6
 0.2
-0.7
 0.6
21 LOC4349761 protein TRAUCO 4349761 Os11g0146500 3.6 2.6
 4.6
 3.6
16.2
 16.2
7.6
 7.6
22 LOC4333045 pre-mRNA-processing factor 17 4333045 Os03g0397500 3.6 1.9
 5.4
 4.9
 3.6
 7.1
7.0
 7.8
7.0
 8.0
 3.7
2.4
 4.2
1.3
 4.7
3.7
23 LOC4334524 probable protein phosphatase 2C 55 4334524 Os03g0809300 3.6 3.4
 3.9
 1.7
 3.3
0.6
 3.0
2.4
 2.3
2.1
 0.4
-0.9
 -0.6
-0.7
 0.4
0.4
 1.3
0.1
24 LOC4345856 dicarboxylate transporter 2.1, chloroplastic 4345856 Os08g0481800 3.6 2.5
 4.7
 1.1
1.0
 0.9
0.2
 0.1
-2.1
 0.3
-0.6
 -1.2
-1.8
 -0.8
-1.9
 -0.0
-0.4
 0.6
25 LOC4331168 protein KINESIN LIGHT CHAIN-RELATED 2 4331168 Os02g0820300 3.6 2.9
 4.3
 3.4
 0.9
 1.8
1.3
 2.8
1.3
 -0.7
 2.0
 5.2
 1.6
26 LOC4342530 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 4342530 Os07g0175100 3.6 2.3
 4.9
 2.1
 3.0
 -0.1
-0.3
 -0.5
-0.6
 0.6
 0.2
 1.0
 -0.5
27 LOC4349693 G-rich sequence factor 1 4349693 Os11g0133600 3.6 2.2
 4.9
 2.5
2.4
 3.0
 3.8
1.8
 2.9
1.4
 2.0
1.6
 -2.0
 -0.5
 4.3
28 LOC4330592 protein TIC 20-v, chloroplastic 4330592 Os02g0726600 3.5 2.1
 5.0
 2.4
 -0.4
 -0.4
-0.8
 0.7
-0.9
 0.9
 -2.0
 -1.8
 0.1
29 LOC9268114 splicing factor-like protein 1 9268114 3.5 4.2
 2.8
 2.5
 2.8
 4.4
1.3
 3.3
1.4
 1.0
 3.7
3.4
 5.4
3.6
 2.8
30 LOC4349020 protein STABILIZED1 4349020 Os10g0498600 3.5 2.5
 4.4
 3.0
 2.7
 5.7
3.8
 5.6
4.1
 2.8
 0.6
 1.6
 4.1
31 LOC4325865 pentatricopeptide repeat-containing protein At1g69290 4325865 Os01g0788900 3.5 2.3
 4.6
 3.6
 3.7
3.4
 1.0
 1.3
 1.3
 0.5
 -0.0
 1.0
-0.5
32 LOC4330736 uncharacterized LOC4330736 4330736 Os02g0749900 3.4 3.4
 3.4
 4.1
3.1


1.1
0.5


33 LOC4334388 BTB/POZ and MATH domain-containing protein 5 4334388 Os03g0792500 3.4 3.0
 3.8
 3.0
0.9
 2.6
2.3
 3.6
3.5
 3.0
2.1
 1.9
1.1
 1.5
0.7
 2.3
1.9
 2.2
1.2
34 LOC4346659 flowering time control protein FPA 4346659 Os09g0298700 3.4 3.1
 3.7
 2.4
 2.5
 1.7
0.7
 1.0
-0.1
 3.4
 0.1
 0.4
 0.0
35 LOC4349477 60S ribosomal export protein NMD3 4349477 Os10g0573900 3.3 3.3
 3.3
 3.7
 2.8
 2.4
2.0
 1.7
1.0
 -0.1
 -1.9
 0.5
 3.0
36 LOC4330939 transcription termination factor MTERF4, chloroplastic-like 4330939 Os02g0783100 3.3 1.9
 4.7
 2.0
 2.3
 4.2
 3.8


0.7
37 LOC4327482 zinc finger protein VAR3, chloroplastic 4327482 Os01g0815700 3.3 2.2
 4.3
 1.9
 0.1
 1.9
0.6
 1.4
0.2
 0.8
 2.3
 2.3
 1.6
38 LOC4347686 seipin-2 4347686 Os09g0534000 3.2 1.8
 4.7
 2.9
 3.0
1.1
 1.1
-1.0
 2.3
-1.2
 0.6
-0.7
 -0.4
 0.0
 1.3
1.2
39 LOC4329970 uncharacterized LOC4329970 4329970 Os02g0613400 3.2 0.9
 5.5
 2.1
 2.4
 1.8
1.6
 2.6
1.5
 2.1
 3.0
2.1
 4.5
2.2
 0.3
40 LOC4334493 DEAD-box ATP-dependent RNA helicase 37-like 4334493 OSNPB_030805200 3.2 2.3
 4.1
 3.9
3.2
 2.4
1.5
 4.3
3.2
 2.9
2.5
 2.2
1.7
 1.5
0.7
 1.7
1.3
 2.0
1.5
41 LOC4328308 DEAD-box ATP-dependent RNA helicase 35A-like 4328308 OSNPB_020150100 3.2 3.0
 3.4
 3.3
-0.2
 3.1
 4.4
2.8
 4.1
1.6
 2.6
1.2
 -0.6
 1.9
 2.7
0.2
42 LOC4337992 protein SLOW GREEN 1, chloroplastic 4337992 Os05g0182100 3.2 2.0
 4.4
 1.4
 0.1
 0.2
-0.3
 0.0
-0.9
 1.2
 1.6
1.1
 2.4
1.8
 0.0
43 LOC4332334 splicing factor 3A subunit 2 4332334 Os03g0263500 3.2 2.4
 3.9
 3.1
 1.6
 3.0
 2.7
 1.8
 1.5
1.1
 3.1
2.7
 1.3
44 LOC4324012 proteinaceous RNase P 2 4324012 Os01g0968000 3.2 2.6
 3.8
 2.9
 2.6
0.9
 3.5
3.1
 4.2
2.9
 1.2
 1.5
1.3
 2.0
1.6
 2.6
45 LOC4346064 methyltransferase-like protein 13 4346064 Os08g0520400 3.2 2.7
 3.6
 2.5
1.6
1.0
 1.6
0.7
 1.0
 -0.6
 -0.8
 -0.5
46 LOC4341119 splicing factor ESS-2 homolog 4341119 Os06g0502900 3.2 2.2
 4.1
 2.1
 2.3
 2.8
2.6
 2.9
2.8
 2.9
 1.1
-0.3
 2.9
1.5
 3.5
47 LOC4338555 pentatricopeptide repeat-containing protein At1g10270 4338555 Os05g0365500 3.2 2.8
 3.5
 3.6
 2.3
1.7
 4.0
2.4
 4.2
2.8
 1.6
 2.5
1.6
 3.3
1.7
 2.3
48 LOC4347726 mediator of RNA polymerase II transcription subunit 4 4347726 Os09g0540500 3.2 3.4
 2.9
 3.9
 2.5
 3.0
2.6
 2.6
2.2
 3.1
1.7
 1.2
 3.0
 3.6
1.7
49 LOC4332117 pentatricopeptide repeat-containing protein At5g47360 4332117 Os03g0225300 3.1 1.9
 4.4
 2.7
 0.6
 -0.4
 -0.7
 -0.7
 0.5
 1.1
 2.0
50 LOC107275576 chaperone protein dnaJ A7A, chloroplastic-like 107275576 OSNPB_050334000 3.1 3.6
0.8
0.7
 2.0
1.9
 2.8
1.3
 1.4
1.4
 1.2
 0.4
-2.4
 1.1
0.6
 1.0
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