Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4352538   psbP domain-containing protein 1, chloroplastic 
 osa-r.5   4352538   psbP domain-containing protein 1, chloroplastic 
 osa-m.8   4352538   psbP domain-containing protein 1, chloroplastic 
 osa-u.4   4342913   psbP domain-containing protein 1, chloroplastic 
 ath-u.4   PPD1   Photosystem II reaction center PsbP family protein 
 gma-u.4   100792664   psbP domain-containing protein 1, chloroplastic 
 sly-u.4   101264980   psbP domain-containing protein 1, chloroplastic 
 ppo-u.4   18098559   psbP domain-containing protein 1, chloroplastic 
 ppo-u.4   7478888   psbP domain-containing protein 1, chloroplastic 
 mtr-u.4   25499636   psbP domain-containing protein 1, chloroplastic 

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Top 50 coexpressed genes to 4352538 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  21 336 25.44
 osa3060   Protein export  1 57 -
 osa3018   RNA degradation  2 112 -
 osa3015   mRNA surveillance pathway  1 115 -
 osa970   Aminoacyl-tRNA biosynthesis  1 117 -

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osa:LOC4352538 (psbP domain-containing protein 1, chloroplastic) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4352538
osa-r.5
for
4352538
osa-m.8
for
4352538
osa-u.4
for
4342913
ath-u.4
for
PPD1
gma-u.4
for
100792664
sly-u.4
for
101264980
ppo-u.4
for
18098559
ppo-u.4
for
7478888
mtr-u.4
for
25499636
1 wgl2 white green leaf2 4334247 Os03g0769100 7.9 8.1
 7.8
 3.2
 4.0
 3.8
3.0
 9.8
 2.0
1.1
 5.8
2.3
 3.9
2 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 7.7 6.8
 8.6
 3.8
 3.4
 4.3
3.1
 7.8
 1.2
 3.3
 3.0
3 LOC4338460 uncharacterized LOC4338460 4338460 Os05g0337400 7.6 5.5
 9.8
 2.9
 4.2
 7.3
5.4
 8.6
 2.6
 5.2
 2.2
4 LOC4337506 30S ribosomal protein S17, chloroplastic-like 4337506 Os04g0691600 7.4 5.4
 9.5
 3.4
4.3
2.9
 5.1
 0.3
 3.2
 2.7
5 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 7.4 6.4
 8.4
 3.3
 4.6
 5.1
4.0
 8.4
 0.8
 6.3
 1.6
6 LOC4331442 50S ribosomal protein L11 4331442 Os03g0122200 7.1 5.5
 8.7
 3.7
 5.5
 2.1
 7.3
 1.0
0.7
 2.5
1.9
 2.7
7 LOC4333848 30S ribosomal protein S13, chloroplastic 4333848 Os03g0704000 7.1 7.9
 6.2
 2.5
 4.0
 5.2
4.5
 6.0
 1.4
0.8
 5.8
3.5
 2.9
8 LOC4334555 50S ribosomal protein L17, chloroplastic 4334555 Os03g0815400 7.0 6.2
 7.8
 2.4
 4.1
 5.8
4.2
 5.8
4.0
 1.4
0.4
 3.3
2.2
 2.0
9 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 6.9 6.0
 7.9
 4.5
2.1
 3.7
 6.0
4.5
 6.1
 1.3
 4.4
 2.4
10 LOC4338005 30S ribosomal protein S31, chloroplastic 4338005 Os05g0186000 6.9 6.0
 7.9
 3.2
 4.0
 3.6
3.3
 3.6
 0.7
 6.6
 3.8
11 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 6.7 6.3
 7.2
 3.1
 5.6
1.6
 3.9
 4.9
4.1
 1.9
1.4
 5.0
4.6
 2.3
12 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 6.7 4.8
 8.6
 3.6
 3.8
 4.4
 5.3
3.6
 1.2
0.6
 4.3
3.5
 1.8
13 LOC4324275 50S ribosomal protein 5, chloroplastic 4324275 Os01g0278900 6.7 7.0
 6.5
 3.3





14 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 6.6 5.8
 7.4
 4.0
 2.8
 5.9
3.4
 6.3
4.9
 1.0
0.2
 2.9
0.4
 3.8
15 LOC4324908 rhodanese-like domain-containing protein 4A, chloroplastic 4324908 Os01g0889800 6.5 5.5
 7.6
 2.7
 3.7
 3.8
3.3
 5.8
 1.2
 4.0
 1.7
16 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 6.4 5.2
 7.6
 2.9
 4.0
 5.7
3.9
 3.2
 0.5
-0.3
 3.2
2.0
 3.5
17 LOC4341869 50S ribosomal protein L24, chloroplastic 4341869 Os06g0683200 6.4 4.9
 7.8
 2.9
 3.7
 5.6
4.4
 6.4
 0.4
 2.4
 3.1
18 LOC4331189 50S ribosomal protein L9, chloroplastic 4331189 Os02g0822600 6.3 5.5
 7.2
 3.8
 5.2
 6.7
3.1
 5.2
 0.3
 3.2
 3.1
19 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 6.3 3.4
 9.2
 2.5
 4.3
 5.6
4.3
 7.8
 1.1
 3.0
 2.5
20 LOC4337177 glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial-like 4337177 6.2 3.9
 8.5
 3.0
 3.1
 3.3
 4.2
 0.5
 1.8
 2.2
21 LOC4333233 30S ribosomal protein S5, chloroplastic 4333233 Os03g0452300 6.2 5.7
 6.6
 3.0
 2.9
 4.4
3.4
 6.8
 1.1
 5.2
 2.6
22 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 6.2 4.7
 7.6
 2.8
 3.7
 3.3
 8.3
 1.4
-0.4
 6.0
0.4
 2.9
23 LOC4327541 50S ribosomal protein L34, chloroplastic 4327541 Os01g0805000 6.2 5.3
 7.1
 2.2
 3.1
 4.3
3.8
 5.6
 1.9
 4.8
 5.0
24 LOC4334651 50S ribosomal protein L18, chloroplastic-like 4334651 OSNPB_030828100 6.1 4.7
 7.5
 3.7
 3.8
 6.6
 6.3
 0.6
0.5
 4.1
3.6
 3.2
25 LOC4331249 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 4331249 Os02g0831200 6.0 5.3
 6.6
 3.4
2.1
 1.9
 2.6
 4.1
 0.4
 1.4
 1.1
26 LOC4334131 50S ribosomal protein L6, chloroplastic 4334131 Os03g0751400 5.9 4.3
 7.6
 4.5
2.1
 3.7
 6.0
4.5
 6.1
 1.3
 4.4
 2.4
27 LOC9267495 signal recognition particle 54 kDa protein, chloroplastic 9267495 Os11g0153600 5.9 6.2
 5.6
 3.6
2.0
 4.2
 3.9
2.4
 4.3
 1.0
-0.3
 3.3
1.4
 1.2
28 LOC4350378 protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like 4350378 Os11g0425300 5.9 5.8
 6.0
 2.8
 0.6
 2.1
2.0
 -0.0
 -0.3
 1.4
 1.6
29 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 5.8 4.3
 7.4
 4.5
 4.6
 3.3
 5.7
 -0.2
 2.0
 3.0
30 LOC4342497 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 4342497 OSNPB_070168000 5.8 5.7
 6.0
 2.4
 2.4
 1.6
 3.1
 1.3
0.9
 2.2
1.7
 1.1
31 LOC4332348 50S ribosomal protein L4, chloroplastic 4332348 Os03g0265400 5.8 6.2
 5.4
 2.8
 3.1
 2.8
2.5
 6.4
 1.7
 4.0
 1.0
32 LOC4334100 photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 4334100 Os03g0747700 5.7 4.1
 7.3
 3.2
 3.4
 2.4
0.9
 2.7
 0.4
 3.6
 1.0
33 LOC4331439 nascent polypeptide-associated complex subunit alpha-like protein 1 4331439 Os03g0121700 5.7 5.4
 6.1
 3.4
-0.3
 2.8
1.0
 1.4
1.1
 0.1
-0.1
 0.5
0.3
 2.7
2.1
 1.5
-0.0
34 LOC4350988 GTPase Der 4350988 Os11g0638000 5.7 5.2
 6.3
 4.2
 1.1
 3.1
 3.2
 0.5
 0.6
 1.2
35 LOC4331942 30S ribosomal protein S10, chloroplastic 4331942 Os03g0196800 5.7 5.8
 5.6
 3.1





36 LOC4327742 uncharacterized RNA methyltransferase pc1998 4327742 Os01g0920300 5.7 5.8
 5.6
 3.4
 1.9
 0.5
 3.1
 0.6
 0.3
 0.9
37 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 5.6 3.6
 7.6
 3.4
 3.4
 2.4
2.2
 3.9
 -0.2
 1.4
 2.5
38 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 5.5 3.8
 7.2
 3.8
 5.6
 4.7
3.9
0.7
 3.5
 2.5
39 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 5.5 4.9
 6.1
 3.3
1.5
 2.2
0.8
 2.7
2.2
 3.0
-0.0
 1.5
0.6
 2.2
1.8
 0.4
0.4
40 LOC4342438 RNA-binding protein CP33, chloroplastic 4342438 Os07g0158300 5.4 5.6
 5.3
 3.4
 4.7
 2.7
1.4
 3.6
 1.0
0.4
 2.5
1.5
 2.1
1.9
41 LOC4338877 DAR GTPase 3, chloroplastic 4338877 Os05g0430400 5.4 4.7
 6.2
 2.9
 3.5
 1.5
-0.6
 3.1
 0.3
 0.3
 2.0
42 LOC4328072 uncharacterized LOC4328072 4328072 Os02g0115600 5.4 5.2
 5.7
 2.8
 4.5
 1.5
 3.4
 0.9
 3.0
 1.0
43 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 5.4 4.7
 6.0
 3.2
 3.7
 3.5
2.4
 5.7
 1.5
0.8
 5.0
1.3
 3.8
44 LOC4333747 uncharacterized tRNA/rRNA methyltransferase YsgA 4333747 Os03g0685100 5.4 5.5
 5.3
 2.7
 1.6
 -0.4
 2.8
 0.8
 0.9
 0.8
45 LOC4329578 2-Cys peroxiredoxin BAS1, chloroplastic-like 4329578 OSNPB_020537700 5.3 6.5
 4.2
 2.1
 4.4
4.0
 4.6
4.3
 5.3
1.9
 1.5
1.2
 4.0
2.7
 4.2
3.3
46 LOC4324026 protein FLUORESCENT IN BLUE LIGHT, chloroplastic 4324026 Os01g0510600 5.3 6.0
 4.7
 2.1
-0.4
 2.6
 4.2
2.1
 6.1
1.7
 -0.9
 1.5
 3.4
47 LOC4331815 ylmG homolog protein 2, chloroplastic 4331815 Os03g0178200 5.3 5.0
 5.5
 1.7
 4.2
 3.6
1.8
 3.8
 1.2
 3.3
 1.4
48 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 5.3 3.8
 6.8
 3.3
2.9
 2.2
0.7
 3.9
3.7
 5.0
3.7
 0.7
0.6
 2.6
1.4
 2.4
49 LOC4334910 uncharacterized LOC4334910 4334910 Os04g0105700 5.2 6.2
 4.3
 3.0
 5.8
 1.8
 1.6
 0.3
 3.2
 2.7
50 LOC4346938 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic 4346938 OSNPB_090382400 5.2 4.0
 6.5
 3.5
 0.8
 2.0
 2.9
 0.2
 3.4
 2.2
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