[←][→] vvi   VIT_00024227001 Gene
functional annotation
Function   DEAD-box ATP-dependent RNA helicase 21  
GO BP
GO CC
GO MF
KEGG vvi03040 [list] [network] Spliceosome (166 genes)
Protein XP_003631587.2 
BLAST XP_003631587.2 
Orthologous [Ortholog page] AT2G33730 (ath)  LOC4333866 (osa)  LOC11430254 (mtr)  LOC25494333 (mtr)  LOC100263263 (vvi)  LOC100281521 (zma)  LOC100286176 (zma)  LOC100792810 (gma)  LOC100799264 (gma)  LOC101245423 (sly)  LOC101267079 (sly)  LOC103865293 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for XP_003631587.2)
Subcellular
localization
TargetP
other 7,  chlo 6  (predict for XP_003631587.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03040 Spliceosome 2
Genes directly connected with LOC100241918 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 LOC100252123 eukaryotic translation initiation factor 3 subunit C [detail] 100252123
7.1 LOC100854406 protein RTF1 homolog [detail] 100854406
7.1 LOC100242352 probable splicing factor 3A subunit 1 [detail] 100242352
6.2 LOC100252230 KH domain-containing protein HEN4 [detail] 100252230
5.9 LOC100247827 patellin-3 [detail] 100247827
5.8 LOC100248954 eukaryotic peptide chain release factor subunit 1-3-like [detail] 100248954
5.8 LOC100251605 ATP-dependent 6-phosphofructokinase 2 [detail] 100251605
5.7 LOC100265458 AT-rich interactive domain-containing protein 1 [detail] 100265458
5.0 LOC100252393 pentatricopeptide repeat-containing protein At5g27460 [detail] 100252393
4.3 LOC100260157 plant-specific TFIIB-related protein PTF2 [detail] 100260157
3.5 LOC100259805 uncharacterized LOC100259805 [detail] 100259805
3.4 LOC100248251 endoglucanase 3 [detail] 100248251
Coexpressed
gene list		 [Coexpressed gene list for LOC100241918]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100241918      
Refseq ID (protein) XP_003631587.2 


The preparation time of this page was 0.1 [sec].