[←][→] vvi   VIT_00033551001 Gene
functional annotation
Function   U4/U6 small nuclear ribonucleoprotein PRP4-like protein  
GO BP
GO CC
GO MF
KEGG vvi03040 [list] [network] Spliceosome (166 genes)
Protein XP_010653924.1  XP_010653925.1 
BLAST XP_010653924.1  XP_010653925.1 
Orthologous [Ortholog page] AT2G05720 (ath)  LIS (ath)  LOC4332861 (osa)  LOC7496110 (ppo)  LOC11434456 (mtr)  LOC25488880 (mtr)  LOC100279862 (zma)  LOC100788948 (gma)  LOC100800927 (gma)  LOC101256472 (sly)  LOC103865889 (bra)  LOC103866560 (bra)  LOC107275966 (osa) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  nucl_plas 2,  chlo 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_010653924.1)
nucl 4,  cyto 2,  nucl_plas 2,  chlo 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_010653925.1)
Subcellular
localization
TargetP
other 8  (predict for XP_010653924.1)
other 8  (predict for XP_010653925.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03015 mRNA surveillance pathway 2
vvi03013 RNA transport 2
Genes directly connected with LOC100243602 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 LOC100245730 transcriptional repressor ILP1 [detail] 100245730
7.1 LOC100256571 protein CASC3 [detail] 100256571
7.0 LOC100252123 eukaryotic translation initiation factor 3 subunit C [detail] 100252123
6.6 LOC100253973 SWI/SNF complex subunit SWI3C [detail] 100253973
6.2 LOC100256585 WD repeat-containing protein 70 [detail] 100256585
5.7 LOC100256712 translation initiation factor eIF-2B subunit beta [detail] 100256712
4.9 LOC100241872 TBC1 domain family member 13 [detail] 100241872
Coexpressed
gene list		 [Coexpressed gene list for LOC100243602]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100243602      
Refseq ID (protein) XP_010653924.1 
XP_010653925.1 


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