[←][→] vvi   VIT_00008866001 Gene
functional annotation
Function   photosystem II 22 kDa protein, chloroplastic  
GO BP
GO CC
GO MF
KEGG vvi00195 [list] [network] Photosynthesis (84 genes)
Protein XP_002285857.1 
BLAST XP_002285857.1 
Orthologous [Ortholog page] LOC542126 (zma)  NPQ4 (ath)  LOC4324933 (osa)  LOC4337500 (osa)  LOC7463155 (ppo)  LOC11419130 (mtr)  LOC100779417 (gma)  LOC100807355 (gma)  psbS (sly)  LOC103833131 (bra)  LOC103847722 (bra) 
Subcellular
localization
wolf
plas 4,  golg 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_002285857.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002285857.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 6
vvi00710 Carbon fixation in photosynthetic organisms 5
vvi00195 Photosynthesis 2
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00030 Pentose phosphate pathway 2
Genes directly connected with LOC100245393 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 LOC100252601 uncharacterized LOC100252601 [detail] 100252601
8.4 LOC100250522 thylakoid lumenal protein TL20.3, chloroplastic [detail] 100250522
7.9 LOC100263871 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [detail] 100263871
7.8 LOC100852555 2-methylene-furan-3-one reductase [detail] 100852555
7.3 LOC100260011 photosystem II reaction center PSB28 protein, chloroplastic [detail] 100260011
7.1 LOC100247687 uncharacterized protein At5g02240 [detail] 100247687
6.5 LOC100255653 uncharacterized LOC100255653 [detail] 100255653
6.5 LOC100267099 flagellar radial spoke protein 5 [detail] 100267099
6.1 LOC100257375 uncharacterized oxidoreductase At1g06690, chloroplastic [detail] 100257375
6.1 LOC100241486 uncharacterized LOC100241486 [detail] 100241486
5.9 LOC100264493 short-chain dehydrogenase TIC 32, chloroplastic [detail] 100264493
5.9 LOC100264142 epimerase family protein SDR39U1 homolog, chloroplastic [detail] 100264142
5.0 LOC100267301 probable lysophospholipase BODYGUARD 4 [detail] 100267301
Coexpressed
gene list		 [Coexpressed gene list for LOC100245393]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100245393      
Refseq ID (protein) XP_002285857.1 


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