[][] vvi   VIT_00011171001 Gene
functional annotation
Function   omega-3 fatty acid desaturase, chloroplastic
GO BP
GO CC
GO MF
KEGG
Protein XP_002264350.1 
BLAST XP_002264350.1 
Orthologous [Ortholog page] LOC542222 (zma)Fad7 (sly)FAD3C (gma)FAD3A (gma)FAD3-2b (gma)FAD3 (ath)FAD7 (ath)FAD8 (ath)LOC4332500 (osa)LOC4344389 (osa)LOC4349544 (osa)LOC4351253 (osa)LOC7466077 (ppo)LOC7468059 (ppo)LOC7478523 (ppo)LOC7490323 (ppo)LOC7494502 (ppo)LOC11411563 (mtr)LOC11415576 (mtr)LOC25490906 (mtr)LOC25498767 (mtr)FAD3B (gma)LOC100134915 (sly)FAD8-1 (gma)LOC100243349 (vvi)LOC100251798 (vvi)LOC100260414 (vvi)LOC100281245 (zma)LOC100283566 (zma)FAD7-1 (gma)FAD7-2 (gma)FAD8.2 (gma)LOC103644592 (zma)LOC103850591 (bra)LOC103857278 (bra)LOC103859380 (bra)LOC103859381 (bra)LOC103864998 (bra)LOC103867994 (bra)LOC103870371 (bra)
Subcellular
localization
wolf
plas 4,  chlo 4,  cyto_plas 3,  mito 1,  E.R. 1  (predict for XP_002264350.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002264350.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin and chlorophyll metabolism 3
vvi01200 Carbon metabolism 2
Genes directly connected with LOC100247097 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.4 LOC100241461 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic-like [detail] 100241461
6.1 CHLH magnesium chelatase H subunit [detail] 100258964
6.1 LOC100241562 uncharacterized LOC100241562 [detail] 100241562
5.7 LOC100252353 protein STAY-GREEN LIKE, chloroplastic [detail] 100252353
3.9 LOC100242043 monoacylglycerol lipase ABHD6 [detail] 100242043
3.9 LOC100251364 protein DMR6-LIKE OXYGENASE 2 [detail] 100251364
Coexpressed
gene list
[Coexpressed gene list for LOC100247097]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100247097    
Refseq ID (protein) XP_002264350.1 


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