[←][→] vvi   VIT_00035576001 Gene
functional annotation
Function   DNA topoisomerase 1  
GO BP
GO CC
GO MF
KEGG
Protein XP_002280960.2  XP_019075107.1 
BLAST XP_002280960.2  XP_019075107.1 
Orthologous [Ortholog page] AT4G31210 (ath)  LOC4329352 (osa)  LOC9271035 (osa)  LOC11429623 (mtr)  LOC25480723 (mtr)  LOC25481862 (mtr)  LOC100778913 (gma)  LOC100788049 (gma)  LOC101248941 (sly)  LOC103631377 (zma)  LOC103638270 (zma)  LOC103851997 (bra)  LOC103862037 (bra) 
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_002280960.2)
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_019075107.1)
Subcellular
localization
TargetP
mito 1  (predict for XP_002280960.2)
other 6,  mito 4  (predict for XP_019075107.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
Genes directly connected with LOC100247441 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 LOC100254820 zinc phosphodiesterase ELAC protein 2 [detail] 100254820
8.4 LOC100257571 polyribonucleotide nucleotidyltransferase 2, mitochondrial [detail] 100257571
8.0 LOC100266920 chaperonin CPN60-like 2, mitochondrial [detail] 100266920
7.0 LOC100241125 homeobox-DDT domain protein RLT3 [detail] 100241125
6.6 LOC100253463 DEAD-box ATP-dependent RNA helicase 22 [detail] 100253463
6.6 LOC100257653 chaperonin 60 subunit alpha 2, chloroplastic [detail] 100257653
6.3 LOC100245429 uncharacterized LOC100245429 [detail] 100245429
5.6 LOC100250302 pentatricopeptide repeat-containing protein At4g04790, mitochondrial [detail] 100250302
5.0 LOC100265527 tRNA-specific 2-thiouridylase MnmA [detail] 100265527
4.5 LOC100250957 protein root UVB sensitive 4 [detail] 100250957
3.7 LOC100249804 uncharacterized LOC100249804 [detail] 100249804
3.4 LOC100257550 N-alpha-acetyltransferase 40 [detail] 100257550
2.5 LOC100261780 uncharacterized LOC100261780 [detail] 100261780
Coexpressed
gene list		 [Coexpressed gene list for LOC100247441]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100247441      
Refseq ID (protein) XP_002280960.2 
XP_019075107.1 


The preparation time of this page was 0.1 [sec].