[←][→] vvi   VIT_00032657001 Gene
functional annotation
Function   E3 ubiquitin-protein ligase SHPRH  
GO BP
GO CC
GO MF
KEGG
Protein XP_010658167.1  XP_010658168.1  XP_019079923.1 
BLAST XP_010658167.1  XP_010658168.1  XP_019079923.1 
Orthologous [Ortholog page] AT2G40770 (ath)  LOC4344297 (osa)  LOC11410582 (mtr)  LOC100776659 (gma)  LOC101254366 (sly)  LOC103633565 (zma)  LOC103865835 (bra) 
Subcellular
localization
wolf
nucl 6,  mito 1,  cyto_mito 1,  chlo 1,  cysk 1  (predict for XP_010658167.1)
nucl 6,  mito 1,  cyto_mito 1,  chlo 1,  cysk 1  (predict for XP_010658168.1)
nucl 6,  cysk 1,  mito 1,  cyto_mito 1  (predict for XP_019079923.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_010658167.1)
other 6,  mito 4  (predict for XP_010658168.1)
other 6,  mito 4  (predict for XP_019079923.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03040 Spliceosome 2
Genes directly connected with LOC100248506 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 LOC100249183 nipped-B-like protein [detail] 100249183
7.9 LOC100261599 lysine-specific demethylase 5B [detail] 100261599
7.6 LOC100262578 uncharacterized LOC100262578 [detail] 100262578
7.4 LOC100262507 uncharacterized LOC100262507 [detail] 100262507
6.1 LOC109121509 uncharacterized LOC109121509 [detail] 109121509
5.0 LOC100253902 DNA mismatch repair protein MLH3 [detail] 100253902
4.3 LOC100261892 putative disease resistance RPP13-like protein 1 [detail] 100261892
3.5 LOC100260791 serine/threonine-protein kinase STY8 [detail] 100260791
Coexpressed
gene list		 [Coexpressed gene list for LOC100248506]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100248506      
Refseq ID (protein) XP_010658167.1 
XP_010658168.1 
XP_019079923.1 


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