[←][→] vvi   VIT_00007870001 Gene
functional annotation
Function   histone deacetylase 5  
GO BP
GO CC
GO MF
KEGG
Protein XP_002280859.2  XP_010663245.1  XP_019082029.1  XP_019082030.1  XP_019082031.1 
BLAST XP_002280859.2  XP_010663245.1  XP_019082029.1  XP_019082030.1  XP_019082031.1 
Orthologous [Ortholog page] LOC541883 (zma)  HDA05 (ath)  LOC4343829 (osa)  LOC7493532 (ppo)  LOC25493882 (mtr)  HDA6 (gma)  HDA15 (gma)  LOC101256079 (sly)  LOC103837366 (bra)  LOC103860568 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_002280859.2)
cyto 6,  nucl 3  (predict for XP_010663245.1)
cyto 6,  nucl 4  (predict for XP_019082029.1)
cyto 6,  nucl 4  (predict for XP_019082030.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_019082031.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002280859.2)
other 9  (predict for XP_010663245.1)
other 9  (predict for XP_019082029.1)
other 9  (predict for XP_019082030.1)
other 9  (predict for XP_019082031.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
Genes directly connected with LOC100250074 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.2 LOC100249389 lysine-specific demethylase JMJ25 [detail] 100249389
5.1 LOC100252352 uncharacterized LOC100252352 [detail] 100252352
4.8 LOC100260925 inactive poly [ADP-ribose] polymerase RCD1 [detail] 100260925
4.6 LOC100264259 BRCA1-A complex subunit BRE [detail] 100264259
Coexpressed
gene list		 [Coexpressed gene list for LOC100250074]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100250074      
Refseq ID (protein) XP_002280859.2 
XP_010663245.1 
XP_019082029.1 
XP_019082030.1 
XP_019082031.1 


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