[←][→] vvi   VIT_00004116001 Gene
functional annotation
Function   ribosome biogenesis protein BOP1 homolog  
GO BP
GO CC
GO MF
KEGG
Protein XP_003635118.2  XP_019073734.1 
BLAST XP_003635118.2  XP_019073734.1 
Orthologous [Ortholog page] AT2G40360 (ath)  LOC4343071 (osa)  LOC11429211 (mtr)  LOC100803648 (gma)  LOC100818497 (gma)  LOC101245591 (sly)  LOC103858155 (bra)  LOC103866863 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_003635118.2)
nucl 4,  cyto 2,  nucl_plas 2,  chlo 1,  pero 1  (predict for XP_019073734.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003635118.2)
other 8  (predict for XP_019073734.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi00970 Aminoacyl-tRNA biosynthesis 3
Genes directly connected with LOC100251720 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.2 LOC100242719 nucleolar protein 6 [detail] 100242719
8.4 LOC100253683 proline--tRNA ligase, cytoplasmic [detail] 100253683
8.3 LOC100244591 mRNA turnover protein 4 homolog [detail] 100244591
8.0 LOC100250159 uncharacterized protein At2g40430 [detail] 100250159
7.5 LOC100853559 phenylalanine--tRNA ligase alpha subunit, cytoplasmic [detail] 100853559
7.5 LOC100265754 RRP12-like protein [detail] 100265754
7.4 LOC100263672 U3 small nucleolar RNA-associated protein 18 homolog [detail] 100263672
7.3 LOC100251412 uncharacterized LOC100251412 [detail] 100251412
6.7 LOC100261955 protein RRP6-like 3 [detail] 100261955
6.7 LOC100257207 valine--tRNA ligase, mitochondrial 1 [detail] 100257207
6.3 LOC100248091 pumilio homolog 23 [detail] 100248091
6.3 LOC100245020 60S ribosomal export protein NMD3 [detail] 100245020
5.7 LOC100258315 DEAD-box ATP-dependent RNA helicase 1 [detail] 100258315
5.5 LOC100250946 DEAD-box ATP-dependent RNA helicase 17 [detail] 100250946
5.4 LOC100264347 protein ROOT INITIATION DEFECTIVE 3 [detail] 100264347
4.4 LOC109121740 gibberellin 3-beta-dioxygenase 4 [detail] 109121740
Coexpressed
gene list		 [Coexpressed gene list for LOC100251720]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100251720      
Refseq ID (protein) XP_003635118.2 
XP_019073734.1 


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