[←][→] vvi   VIT_00033642001 Gene
functional annotation
Function   pentatricopeptide repeat-containing protein At1g80270, mitochondrial  
GO BP
GO CC
GO MF
KEGG
Protein XP_002266581.2 
BLAST XP_002266581.2 
Orthologous [Ortholog page] LOC778342 (sly)  AT3G15590 (ath)  AT1G15480 (ath)  PPR596 (ath)  LOC4326909 (osa)  LOC4342742 (osa)  LOC4351621 (osa)  LOC7464096 (ppo)  LOC7479672 (ppo)  LOC11416123 (mtr)  LOC11429425 (mtr)  LOC100281211 (zma)  LOC100500196 (gma)  LOC100805354 (gma)  LOC100806780 (gma)  LOC103632127 (zma)  LOC103650031 (zma)  LOC103830428 (bra)  LOC103869899 (bra)  LOC103872343 (bra) 
Subcellular
localization
wolf
chlo 4,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1  (predict for XP_002266581.2)
Subcellular
localization
TargetP
mito 9  (predict for XP_002266581.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
Genes directly connected with LOC100252030 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.2 LOC100263672 U3 small nucleolar RNA-associated protein 18 homolog [detail] 100263672
10.0 LOC100253139 probable protein arginine N-methyltransferase 3 [detail] 100253139
9.1 LOC100242258 DEAD-box ATP-dependent RNA helicase 27 [detail] 100242258
8.4 LOC104881408 uncharacterized LOC104881408 [detail] 104881408
7.5 LOC100240821 probable Xaa-Pro aminopeptidase 3 [detail] 100240821
7.2 LOC100259239 uncharacterized mitochondrial protein ymf11 [detail] 100259239
7.1 LOC100246746 pentatricopeptide repeat-containing protein At3g48250, chloroplastic [detail] 100246746
6.3 LOC100257445 uncharacterized LOC100257445 [detail] 100257445
5.8 LOC100260357 pentatricopeptide repeat-containing protein At1g08610 [detail] 100260357
5.7 LOC100262638 alkylated DNA repair protein alkB homolog 8 [detail] 100262638
5.0 LOC100256702 RNA demethylase ALKBH5 [detail] 100256702
Coexpressed
gene list		 [Coexpressed gene list for LOC100252030]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100252030      
Refseq ID (protein) XP_002266581.2 


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