[←][→] vvi   VIT_00023997001 Gene
functional annotation
Function   RNA-binding protein 39  
GO BP
GO CC
GO MF
KEGG
Protein XP_002279887.2  XP_019074478.1  XP_019074479.1 
BLAST XP_002279887.2  XP_019074478.1  XP_019074479.1 
Orthologous [Ortholog page] AT2G16940 (ath)  AT5G09880 (ath)  LOC7453655 (ppo)  LOC7476432 (ppo)  LOC9269341 (osa)  LOC9270364 (osa)  LOC11423679 (mtr)  LOC11426905 (mtr)  LOC100243992 (vvi)  LOC100274411 (zma)  LOC100278875 (zma)  LOC100383130 (zma)  LOC100789839 (gma)  LOC100793461 (gma)  LOC100795336 (gma)  LOC100802446 (gma)  LOC100818613 (gma)  LOC101259103 (sly)  LOC103846010 (bra)  LOC103846856 (bra)  LOC103850353 (bra)  LOC112417170 (mtr) 
Subcellular
localization
wolf
nucl 10  (predict for XP_002279887.2)
nucl 10  (predict for XP_019074478.1)
chlo 6,  mito 3  (predict for XP_019074479.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002279887.2)
other 9  (predict for XP_019074478.1)
mito 5,  other 4  (predict for XP_019074479.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
vvi03013 RNA transport 2
vvi03015 mRNA surveillance pathway 2
Genes directly connected with LOC100253813 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.1 LOC100244445 U1 small nuclear ribonucleoprotein 70 kDa [detail] 100244445
7.2 LOC100244513 uncharacterized LOC100244513 [detail] 100244513
7.1 LOC104882152 uncharacterized LOC104882152 [detail] 104882152
6.1 LOC100260199 ubiquilin [detail] 100260199
5.7 LOC100258635 DEAD-box ATP-dependent RNA helicase 20 [detail] 100258635
5.6 LOC100262417 flowering time control protein FCA [detail] 100262417
5.0 LOC100243034 splicing factor U2af large subunit B [detail] 100243034
4.2 LOC100265179 uncharacterized LOC100265179 [detail] 100265179
4.0 LOC100258168 THO complex subunit 4B [detail] 100258168
Coexpressed
gene list		 [Coexpressed gene list for LOC100253813]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100253813      
Refseq ID (protein) XP_002279887.2 
XP_019074478.1 
XP_019074479.1 


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