[←][→] vvi   VIT_00018506001 Gene
functional annotation
Function   cleavage and polyadenylation specificity factor subunit 1  
GO BP
GO CC
GO MF
KEGG vvi03015 [list] [network] mRNA surveillance pathway (110 genes)
Protein XP_002268371.1  XP_019081674.1  XP_019081675.1  XP_019081676.1  XP_019081677.1 
BLAST XP_002268371.1  XP_019081674.1  XP_019081675.1  XP_019081676.1  XP_019081677.1 
Orthologous [Ortholog page] CPSF160 (ath)  LOC9266269 (osa)  LOC25497136 (mtr)  LOC100785543 (gma)  LOC100801803 (gma)  LOC101246111 (sly)  LOC103648775 (zma)  LOC103852133 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 3,  chlo_mito 3  (predict for XP_002268371.1)
chlo 5,  nucl 3,  cysk 1,  nucl_plas 1  (predict for XP_019081674.1)
chlo 5,  nucl 3,  cysk 1,  nucl_plas 1  (predict for XP_019081675.1)
chlo 6,  nucl 3,  chlo_mito 3  (predict for XP_019081676.1)
chlo 6,  nucl 2,  cysk 1,  cyto_nucl 1  (predict for XP_019081677.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002268371.1)
other 6  (predict for XP_019081674.1)
other 6  (predict for XP_019081675.1)
other 6  (predict for XP_019081676.1)
other 6  (predict for XP_019081677.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 RNA transport 3
Genes directly connected with LOC100256706 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 LOC100252352 uncharacterized LOC100252352 [detail] 100252352
8.9 LOC100266475 nuclear pore complex protein NUP205 [detail] 100266475
8.8 LOC100254031 protein SABRE [detail] 100254031
7.6 LOC100257580 nuclear pore complex protein GP210 [detail] 100257580
6.9 LOC100855390 uncharacterized LOC100855390 [detail] 100855390
6.3 LOC100248009 uncharacterized LOC100248009 [detail] 100248009
5.2 LOC109121399 putative pentatricopeptide repeat-containing protein At3g18840 [detail] 109121399
5.2 LOC100265424 D-alanine--D-alanine ligase [detail] 100265424
5.2 LOC100257691 protein KAKU4 [detail] 100257691
5.0 LOC100248990 protein translocase subunit SECA2, chloroplastic [detail] 100248990
4.5 LOC100852438 anaphase-promoting complex subunit 5 [detail] 100852438
4.4 LOC100249219 pentatricopeptide repeat-containing protein At5g61800 [detail] 100249219
4.4 LOC100255872 putative bifunctional dihydrofolate reductase-thymidylate synthase [detail] 100255872
Coexpressed
gene list		 [Coexpressed gene list for LOC100256706]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100256706      
Refseq ID (protein) XP_002268371.1 
XP_019081674.1 
XP_019081675.1 
XP_019081676.1 
XP_019081677.1 


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