[][] vvi   VIT_00035357001 Gene
functional annotation
Function   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
GO BP
GO CC
GO MF
KEGG vvi03015 [list] [network] mRNA surveillance pathway (110 genes)
Protein XP_002277550.1  XP_010648327.1 
BLAST XP_002277550.1  XP_010648327.1 
Orthologous [Ortholog page] ATB BETA (ath)B ALPHA (ath)LOC4328769 (osa)LOC4341313 (osa)LOC7457753 (ppo)LOC7462265 (ppo)LOC9270873 (osa)LOC11419844 (mtr)LOC11425778 (mtr)LOC25500415 (mtr)LOC100191387 (zma)LOC100191991 (zma)LOC100193694 (zma)LOC100243351 (vvi)LOC100265267 (vvi)LOC100266437 (vvi)LOC100383125 (zma)LOC100786941 (gma)LOC100789058 (gma)LOC100790801 (gma)LOC100795137 (gma)LOC100799449 (gma)LOC101246329 (sly)LOC101251957 (sly)LOC101256096 (sly)LOC101260240 (sly)LOC103832831 (bra)LOC103835944 (bra)LOC103842735 (bra)PP2AB (bra)LOC103871268 (bra)LOC103872554 (bra)
Subcellular
localization
wolf
nucl 5,  cyto 4,  pero 1,  cysk 1  (predict for XP_002277550.1)
nucl 5,  cyto 4,  pero 1,  cysk 1  (predict for XP_010648327.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002277550.1)
other 8  (predict for XP_010648327.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LOC100257641 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.0 LOC100258075 probable serine/threonine-protein kinase DDB_G0276461 [detail] 100258075
5.0 LOC100244262 magnesium transporter MRS2-I [detail] 100244262
4.8 LOC100259369 two-component response regulator ARR12 [detail] 100259369
4.4 LOC100265606 serine/threonine-protein kinase ppk15 [detail] 100265606
4.4 LOC100257960 zeaxanthin epoxidase, chloroplastic [detail] 100257960
Coexpressed
gene list
[Coexpressed gene list for LOC100257641]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100257641    
Refseq ID (protein) XP_002277550.1 
XP_010648327.1 


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