[←][→] vvi   VIT_00034722001 Gene
functional annotation
Function   probable ATP-dependent RNA helicase ddx5  
GO BP
GO CC
GO MF
KEGG
Protein XP_002268926.1  XP_010658711.1  XP_010658712.1  XP_010658713.1  XP_010658714.1  XP_019080091.1 
BLAST XP_002268926.1  XP_010658711.1  XP_010658712.1  XP_010658713.1  XP_010658714.1  XP_019080091.1 
Orthologous [Ortholog page] AT2G28600 (ath)  LOC4351499 (osa)  LOC7455505 (ppo)  LOC11424303 (mtr)  LOC100284481 (zma)  LOC100809099 (gma)  LOC101253955 (sly)  LOC103832594 (bra)  LOC104881177 (vvi)  LOC109123768 (vvi) 
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_002268926.1)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_010658711.1)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_010658712.1)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_010658713.1)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_010658714.1)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_019080091.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_002268926.1)
chlo 6,  other 4  (predict for XP_010658711.1)
chlo 6,  other 4  (predict for XP_010658712.1)
chlo 6,  other 4  (predict for XP_010658713.1)
chlo 6,  other 4  (predict for XP_010658714.1)
chlo 6,  other 4  (predict for XP_019080091.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with LOC100260841 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 LOC100247856 nucleolar complex protein 2 homolog [detail] 100247856
6.8 LOC100253139 probable protein arginine N-methyltransferase 3 [detail] 100253139
6.5 LOC100244591 mRNA turnover protein 4 homolog [detail] 100244591
6.3 LOC100245020 60S ribosomal export protein NMD3 [detail] 100245020
6.1 LOC100244896 probable serine/threonine-protein kinase abkC [detail] 100244896
4.9 LOC109121395 tRNA (cytosine-5-)-methyltransferase [detail] 109121395
Coexpressed
gene list		 [Coexpressed gene list for LOC100260841]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100260841      
Refseq ID (protein) XP_002268926.1 
XP_010658711.1 
XP_010658712.1 
XP_010658713.1 
XP_010658714.1 
XP_019080091.1 


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