[←][→] vvi   VIT_00033965001 Gene
functional annotation
Function   E3 ubiquitin-protein ligase rnf8  
GO BP
GO CC
GO MF
KEGG
Protein XP_002280008.1  XP_010654158.1  XP_010654159.1 
BLAST XP_002280008.1  XP_010654158.1  XP_010654159.1 
Orthologous [Ortholog page] AT3G47160 (ath)  AIRP2 (ath)  AT5G58787 (ath)  LOC4337424 (osa)  LOC4344184 (osa)  LOC4348743 (osa)  LOC7466068 (ppo)  LOC7477415 (ppo)  LOC7481481 (ppo)  LOC7487314 (ppo)  LOC9269562 (osa)  LOC11410065 (mtr)  LOC11420407 (mtr)  LOC11424918 (mtr)  LOC25493183 (mtr)  LOC100126941 (zma)  LOC100244841 (vvi)  LOC100281234 (zma)  LOC100282914 (zma)  LOC100777318 (gma)  LOC100786183 (gma)  LOC100789769 (gma)  LOC100811330 (gma)  LOC100814293 (gma)  LOC100818286 (gma)  LOC100819267 (gma)  LOC101243841 (sly)  LOC101248144 (sly)  LOC103642202 (zma)  LOC103855416 (bra)  LOC103856664 (bra)  LOC103873258 (bra)  LOC104879530 (vvi)  LOC109942841 (zma) 
Subcellular
localization
wolf
nucl 7,  mito 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_002280008.1)
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_010654158.1)
chlo 7,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_010654159.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_002280008.1)
other 9  (predict for XP_010654158.1)
scret 9  (predict for XP_010654159.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LOC100261401 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.1 LOC100259029 uncharacterized LOC100259029 [detail] 100259029
5.9 LOC100243561 uncharacterized LOC100243561 [detail] 100243561
5.4 LOC100258286 uncharacterized protein YciO [detail] 100258286
5.1 LOC100247128 E3 ubiquitin-protein ligase At3g02290 [detail] 100247128
5.0 LOC100258793 protein yippee-like [detail] 100258793
4.7 LOC100254487 R3H domain-containing protein 4 [detail] 100254487
4.6 LOC100257195 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [detail] 100257195
4.5 LOC100246113 uncharacterized protein At2g39920 [detail] 100246113
Coexpressed
gene list		 [Coexpressed gene list for LOC100261401]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100261401      
Refseq ID (protein) XP_002280008.1 
XP_010654158.1 
XP_010654159.1 


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