[←][→] vvi   VIT_00033622001 Gene
functional annotation
Function   protein SMG7  
GO BP
GO CC
GO MF
KEGG vvi03015 [list] [network] mRNA surveillance pathway (110 genes)
Protein XP_002272687.3  XP_010653966.1  XP_010653967.1  XP_010653968.1 
BLAST XP_002272687.3  XP_010653966.1  XP_010653967.1  XP_010653968.1 
Orthologous [Ortholog page] SMG7 (ath)  LOC4345227 (osa)  LOC7480120 (ppo)  LOC11431860 (mtr)  LOC25480553 (mtr)  LOC100267161 (vvi)  LOC100278146 (zma)  LOC100384817 (zma)  LOC100779982 (gma)  LOC100787602 (gma)  LOC101244332 (sly)  LOC101247106 (sly)  LOC103845757 (bra)  LOC103851271 (bra) 
Subcellular
localization
wolf
plas 5,  nucl 3,  cysk_plas 3  (predict for XP_002272687.3)
plas 5,  nucl 3,  cysk_plas 3  (predict for XP_010653966.1)
plas 5,  nucl 3,  cysk_plas 3  (predict for XP_010653967.1)
plas 5,  nucl 3,  cysk_plas 3  (predict for XP_010653968.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002272687.3)
other 8  (predict for XP_010653966.1)
other 8  (predict for XP_010653967.1)
other 8  (predict for XP_010653968.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 4
vvi03013 RNA transport 2
vvi00260 Glycine, serine and threonine metabolism 2
vvi00460 Cyanoamino acid metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
Genes directly connected with LOC100264171 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 LOC100259831 ABC transporter B family member 20 [detail] 100259831
6.5 LOC100267161 protein SMG7 [detail] 100267161
6.2 LOC100258822 zinc finger CCCH domain-containing protein 30 [detail] 100258822
6.0 LOC100241225 serine hydroxymethyltransferase 7 [detail] 100241225
5.1 LOC100247854 serine/threonine-protein kinase/endoribonuclease IRE1b [detail] 100247854
3.2 LOC100259057 uncharacterized LOC100259057 [detail] 100259057
Coexpressed
gene list		 [Coexpressed gene list for LOC100264171]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100264171      
Refseq ID (protein) XP_002272687.3 
XP_010653966.1 
XP_010653967.1 
XP_010653968.1 


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