[←][→] gma   GLYMA_12G173200 Gene
functional annotation
Function   4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic  
GO BP
GO CC
GO MF
KEGG gmx00900 [list] [network] Terpenoid backbone biosynthesis (93 genes)
Protein XP_003540178.1  XP_006592698.1  XP_006592699.1 
BLAST XP_003540178.1  XP_006592698.1  XP_006592699.1 
Orthologous [Ortholog page] LOC542690 (zma)  HDS (sly)  HDS (ath)  LOC4329911 (osa)  LOC7489339 (ppo)  LOC11413255 (mtr)  LOC100257071 (vvi)  LOC100801743 (gma)  LOC103845475 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  mito 1,  mito_plas 1,  nucl 1,  vacu 1  (predict for XP_003540178.1)
chlo 4,  cyto 3,  mito 1,  mito_plas 1,  nucl 1,  vacu 1  (predict for XP_006592698.1)
chlo 4,  cyto 3,  mito 1,  mito_plas 1,  nucl 1,  vacu 1  (predict for XP_006592699.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_003540178.1)
chlo 6,  other 4  (predict for XP_006592698.1)
chlo 6,  other 4  (predict for XP_006592699.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 9
gma01230 Biosynthesis of amino acids 3
gma00270 Cysteine and methionine metabolism 2
gma01200 Carbon metabolism 2
Genes directly connected with LOC100819481 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.0 LOC100801743 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [detail] 100801743
7.6 LOC100805941 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic [detail] 100805941
6.0 LOC100818067 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic [detail] 100818067
5.7 LOC100812541 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like [detail] 100812541
5.5 LOC100784845 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic [detail] 100784845
4.7 LOC100808796 D-aminoacyl-tRNA deacylase-like [detail] 100808796
4.6 LOC100791973 actin-related protein 8 [detail] 100791973
Coexpressed
gene list		 [Coexpressed gene list for LOC100819481]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100819481      
Refseq ID (protein) XP_003540178.1 
XP_006592698.1 
XP_006592699.1 


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