[][] sly   101243642 Gene
functional annotation
Function   E3 ubiquitin-protein ligase RMA3-like
GO BP
GO CC
GO MF
KEGG sly04141 [list] [network] Protein processing in endoplasmic reticulum (226 genes)
Protein XP_004248270.1  XP_019071624.1 
BLAST XP_004248270.1  XP_019071624.1 
Orthologous [Ortholog page] RMA1 (ath)RMA3 (ath)RMA2 (ath)LOC4330106 (osa)LOC4336483 (osa)LOC7460826 (ppo)LOC7477410 (ppo)LOC25485936 (mtr)LOC25487645 (mtr)LOC25487651 (mtr)LOC25493170 (mtr)LOC25493171 (mtr)LOC25502627 (mtr)LOC100192071 (zma)LOC100255559 (vvi)LOC100257429 (vvi)LOC100265502 (vvi)LOC100286356 (zma)LOC100779793 (gma)LOC100780643 (gma)LOC100782827 (gma)LOC100785491 (gma)LOC100786373 (gma)LOC100807061 (gma)LOC100807729 (gma)LOC100816864 (gma)LOC100817526 (gma)LOC101247183 (sly)LOC101248949 (sly)LOC101253976 (sly)LOC101254012 (sly)LOC101262152 (sly)MKB1 (sly)LOC101264841 (sly)LOC103627470 (zma)LOC103834771 (bra)LOC103846598 (bra)LOC103861695 (bra)LOC103861821 (bra)LOC103867189 (bra)LOC103867947 (bra)
Subcellular
localization
wolf
nucl 6,  cyto 1,  golg 1,  chlo 1,  extr 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_004248270.1)
nucl 6,  cyto 1,  golg 1,  chlo 1,  extr 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_019071624.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004248270.1)
other 9  (predict for XP_019071624.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
Genes directly connected with LOC101243642 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
4.5 LOC101264375 uncharacterized LOC101264375 [detail] 101264375
4.3 LOC101249588 CCR4-NOT transcription complex subunit 9-like [detail] 101249588
4.3 LOC101247371 universal stress protein PHOS34 [detail] 101247371
3.5 LOC101264939 protein PHOX1-like [detail] 101264939
3.0 LOC112941610 small nucleolar RNA snoR109 [detail] 112941610
Coexpressed
gene list
[Coexpressed gene list for LOC101243642]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 101243642    
Refseq ID (protein) XP_004248270.1 
XP_019071624.1 


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