[←][→] sly   101259772 Gene
functional annotation
Function   DEAD-box ATP-dependent RNA helicase 56  
GO BP
GO CC
GO MF
KEGG sly03013 [list] [network] RNA transport (169 genes)
sly03015 [list] [network] mRNA surveillance pathway (130 genes)
sly03040 [list] [network] Spliceosome (188 genes)
Protein XP_004245029.1  XP_010324987.1  XP_010324988.1 
BLAST XP_004245029.1  XP_010324987.1  XP_010324988.1 
Orthologous [Ortholog page] UAP56a (ath)  UAP56b (ath)  LOC4326192 (osa)  LOC4326193 (osa)  LOC7468631 (ppo)  LOC11424505 (mtr)  LOC11431965 (mtr)  LOC25491302 (mtr)  LOC100250852 (vvi)  LOC100268003 (vvi)  LOC100273717 (zma)  LOC100384654 (zma)  LOC100785358 (gma)  LOC100796232 (gma)  LOC100799082 (gma)  LOC100808957 (gma)  LOC101261336 (sly)  LOC103846744 (bra)  LOC103846746 (bra)  LOC103850757 (bra)  LOC103850759 (bra)  LOC103855903 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  cysk 3  (predict for XP_004245029.1)
nucl 4,  cyto 3,  cysk 3  (predict for XP_010324987.1)
cyto 6,  nucl 1,  vacu 1,  E.R. 1,  golg 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_010324988.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004245029.1)
other 9  (predict for XP_010324987.1)
scret 6,  other 5  (predict for XP_010324988.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04144 Endocytosis 2
sly03015 mRNA surveillance pathway 2
Genes directly connected with LOC101259772 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 LOC101260909 actin-related protein 4 [detail] 101260909
5.2 LOC101257670 serine/arginine-rich splicing factor SR34B [detail] 101257670
4.9 LOC101267847 ER membrane protein complex subunit 2 [detail] 101267847
Coexpressed
gene list		 [Coexpressed gene list for LOC101259772]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 101259772      
Refseq ID (protein) XP_004245029.1 
XP_010324987.1 
XP_010324988.1 


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