[←][→] sly   101268042 Gene
functional annotation
Function   serine/threonine-protein kinase SMG1-like  
GO BP
GO CC
GO MF
KEGG sly03015 [list] [network] mRNA surveillance pathway (130 genes)
Protein XP_010315281.1  XP_010315282.1  XP_010315283.1  XP_010315284.1  XP_010315286.1  XP_010315287.1  XP_025884403.1  XP_025884404.1  XP_025884406.1 
BLAST XP_010315281.1  XP_010315282.1  XP_010315283.1  XP_010315284.1  XP_010315286.1  XP_010315287.1  XP_025884403.1  XP_025884404.1  XP_025884406.1 
Orthologous [Ortholog page] LOC4334045 (osa)  LOC11414460 (mtr)  LOC100260579 (vvi)  LOC100808763 (gma)  LOC103643975 (zma)  LOC103844331 (bra) 
Subcellular
localization
wolf
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_010315281.1)
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_010315282.1)
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_010315283.1)
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_010315284.1)
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_010315286.1)
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_010315287.1)
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_025884403.1)
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_025884404.1)
nucl 3,  plas 3,  nucl_plas 3,  chlo 2  (predict for XP_025884406.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_010315281.1)
mito 2  (predict for XP_010315282.1)
mito 2  (predict for XP_010315283.1)
mito 2  (predict for XP_010315284.1)
mito 2  (predict for XP_010315286.1)
mito 2  (predict for XP_010315287.1)
mito 2  (predict for XP_025884403.1)
mito 2  (predict for XP_025884404.1)
mito 2  (predict for XP_025884406.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
Genes directly connected with LOC101268042 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.7 LOC101261615 E3 ubiquitin-protein ligase UPL2 [detail] 101261615
14.3 LOC101259792 sacsin [detail] 101259792
14.2 LOC101249744 E3 ubiquitin-protein ligase UPL1 [detail] 101249744
12.9 LOC101260131 protein SABRE [detail] 101260131
12.7 LOC101247785 chromatin structure-remodeling complex protein SYD [detail] 101247785
11.9 LOC101257436 uncharacterized LOC101257436 [detail] 101257436
11.6 LOC101259468 protein DDB_G0276689 [detail] 101259468
11.5 LOC101259295 serine/threonine-protein kinase TOR [detail] 101259295
10.8 LOC101265768 chromatin modification-related protein EAF1 B-like [detail] 101265768
9.3 LOC101262536 uncharacterized LOC101262536 [detail] 101262536
9.0 LOC101252999 histone-lysine N-methyltransferase ASHH2-like [detail] 101252999
8.6 LOC101253578 serine/threonine-protein kinase ATM [detail] 101253578
8.5 LOC101262837 guanine nucleotide exchange factor SPIKE 1 [detail] 101262837
8.3 LOC101259204 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [detail] 101259204
8.1 LOC101258404 uncharacterized LOC101258404 [detail] 101258404
8.1 LOC101254835 uncharacterized LOC101254835 [detail] 101254835
7.3 LOC101263664 exosome complex exonuclease RRP44 homolog A [detail] 101263664
6.8 LOC112941363 uncharacterized LOC112941363 [detail] 112941363
6.7 LOC101261764 pentatricopeptide repeat-containing protein At5g39710 [detail] 101261764
6.7 LOC101244666 putative late blight resistance protein homolog R1A-4 [detail] 101244666
5.7 LOC112941561 uncharacterized LOC112941561 [detail] 112941561
5.3 LOC112942119 uncharacterized LOC112942119 [detail] 112942119
5.1 LOC101249027 protein SUPPRESSOR OF PHYA-105 1-like [detail] 101249027
4.6 LOC101246406 DNA-(apurinic or apyrimidinic site) lyase 2 [detail] 101246406
4.2 LOC101244842 tripeptidyl-peptidase 2-like [detail] 101244842
Coexpressed
gene list		 [Coexpressed gene list for LOC101268042]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 101268042      
Refseq ID (protein) XP_010315281.1 
XP_010315282.1 
XP_010315283.1 
XP_010315284.1 
XP_010315286.1 
XP_010315287.1 
XP_025884403.1 
XP_025884404.1 
XP_025884406.1 


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