[←][→] mtr   MTR_4g116430 Gene
functional annotation
Function   110 kDa U5 small nuclear ribonucleoprotein component CLO  
GO BP
GO CC
GO MF
KEGG mtr03040 [list] [network] Spliceosome (215 genes)
Protein XP_003609507.2 
BLAST XP_003609507.2 
Orthologous [Ortholog page] AT5G25230 (ath)  MEE5 (ath)  LOC4341492 (osa)  LOC7489480 (ppo)  LOC100253367 (vvi)  LOC100782529 (gma)  LOC100783191 (gma)  LOC101252197 (sly)  LOC103638709 (zma)  LOC103836488 (bra)  LOC103875457 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_003609507.2)
Subcellular
localization
TargetP
other 8  (predict for XP_003609507.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with LOC11438189 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.4 LOC11442176 DExH-box ATP-dependent RNA helicase DExH10 [detail] 11442176
9.9 LOC25489111 leucine--tRNA ligase, cytoplasmic [detail] 25489111
9.0 LOC25501876 tRNA (cytosine(34)-C(5))-methyltransferase [detail] 25501876
8.7 LOC11418051 carbamoyl-phosphate synthase large chain, chloroplastic [detail] 11418051
8.5 LOC25485734 spliceosome-associated protein 130 A [detail] 25485734
8.4 LOC11434873 nuclear pore complex protein NUP133 [detail] 11434873
7.7 LOC11439130 protease Do-like 9 [detail] 11439130
7.3 LOC11411071 transmembrane protein 209 [detail] 11411071
6.8 LOC11443643 peroxisomal ATPase pex6 [detail] 11443643
5.0 LOC11408567 pentatricopeptide repeat-containing protein At5g65560 [detail] 11408567
4.9 LOC11430878 pentatricopeptide repeat-containing protein At4g19440, chloroplastic [detail] 11430878
Coexpressed
gene list		 [Coexpressed gene list for LOC11438189]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 11438189      
Refseq ID (protein) XP_003609507.2 


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