[←][→] osa   Os05g0178900 Gene
functional annotation
Function   pre-mRNA splicing factor SR-like 1  
GO BP
GO CC
GO MF
KEGG osa03040 [list] [network] Spliceosome (195 genes)
Protein XP_015640508.1  XP_025881460.1  XP_025881461.1 
BLAST XP_015640508.1  XP_025881460.1  XP_025881461.1 
Orthologous [Ortholog page] ATSRL1 (ath)  LOC7494516 (ppo)  LOC11436892 (mtr)  LOC100191198 (zma)  LOC100267328 (vvi)  LOC100383017 (zma)  LOC100788237 (gma)  LOC100793812 (gma)  LOC101266210 (sly)  LOC103863710 (bra)  LOC107281411 (osa) 
Subcellular
localization
wolf
nucl 10  (predict for XP_015640508.1)
cyto 5,  cyto_E.R. 3,  chlo 1,  nucl 1,  plas 1,  extr 1,  cysk 1,  golg 1,  cysk_nucl 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1  (predict for XP_025881460.1)
cyto 5,  cyto_E.R. 3,  cysk 1,  chlo 1,  nucl 1,  plas 1,  golg 1,  nucl_plas 1,  golg_plas 1  (predict for XP_025881461.1)
Subcellular
localization
TargetP
other 8,  scret 4  (predict for XP_015640508.1)
other 8,  scret 4  (predict for XP_025881460.1)
other 8,  scret 4  (predict for XP_025881461.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
osa03018 RNA degradation 2
Genes directly connected with LOC4337972 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 LOC4342674 splicing factor 3B subunit 3 [detail] 4342674
5.5 LOC4340813 formin-binding protein 4 [detail] 4340813
5.5 LOC4332645 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 [detail] 4332645
5.3 LOC4336482 syntaxin-81 [detail] 4336482
4.2 LOC4336296 cell division control protein 48 homolog B [detail] 4336296
Coexpressed
gene list		 [Coexpressed gene list for LOC4337972]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 4337972      
Refseq ID (protein) XP_015640508.1 
XP_025881460.1 
XP_025881461.1 


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