[←][→] osa   Os05g0447580 Gene
functional annotation
Function   mediator of RNA polymerase II transcription subunit 13  
GO BP
GO CC
GO MF
KEGG
Protein XP_015639680.1  XP_015639681.1  XP_015639682.1  XP_015639683.1 
BLAST XP_015639680.1  XP_015639681.1  XP_015639682.1  XP_015639683.1 
Orthologous [Ortholog page] GCT (ath)  LOC11437356 (mtr)  LOC100263945 (vvi)  LOC100279985 (zma)  LOC100781873 (gma)  LOC100782017 (gma)  LOC101261015 (sly)  LOC103829787 (bra)  LOC103871044 (bra) 
Subcellular
localization
wolf
nucl 5,  cysk_nucl 3,  chlo 1,  vacu 1,  mito 1,  plas 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_015639680.1)
nucl 5,  cysk_nucl 3,  chlo 1,  vacu 1,  mito 1,  plas 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_015639681.1)
nucl 5,  cysk_nucl 3,  chlo 1,  vacu 1,  mito 1,  plas 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_015639682.1)
nucl 5,  cysk_nucl 3,  chlo 1,  vacu 1,  mito 1,  plas 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_015639683.1)
Subcellular
localization
TargetP
other 6  (predict for XP_015639680.1)
other 6  (predict for XP_015639681.1)
other 6  (predict for XP_015639682.1)
other 6  (predict for XP_015639683.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
Genes directly connected with LOC4338949 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.1 LOC107278765 SAC3 family protein B [detail] 107278765
11.5 LOC4332044 hornerin [detail] 4332044
11.1 LOC107277724 uncharacterized LOC107277724 [detail] 107277724
10.3 LOC4330371 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [detail] 4330371
10.3 LOC4344410 ENHANCER OF AG-4 protein 2 [detail] 4344410
10.0 LOC4323885 uncharacterized LOC4323885 [detail] 4323885
9.8 LOC4344141 protein HUA2-LIKE 3 [detail] 4344141
9.8 LOC9270052 transformation/transcription domain-associated protein [detail] 9270052
9.4 LOC4348553 F-box/LRR-repeat protein 15 [detail] 4348553
9.0 LOC4333889 probable serine/threonine protein kinase IREH1 [detail] 4333889
8.9 LOC4340825 enhancer of mRNA-decapping protein 4 [detail] 4340825
8.7 LOC4329933 protein FAR1-RELATED SEQUENCE 6 [detail] 4329933
7.6 LOC4345278 uncharacterized LOC4345278 [detail] 4345278
7.3 LOC4333174 lysine-specific demethylase JMJ25 [detail] 4333174
7.1 LOC4325502 DExH-box ATP-dependent RNA helicase DExH6 [detail] 4325502
7.1 LOC4328690 death-inducer obliterator 1 [detail] 4328690
7.0 LOC4347140 AT-rich interactive domain-containing protein 4 [detail] 4347140
7.0 LOC4328857 ubiquitin carboxyl-terminal hydrolase 15 [detail] 4328857
6.9 LOC4335414 protein TRANSPARENT TESTA 9 [detail] 4335414
6.3 LOC4338212 switch 2 [detail] 4338212
5.9 LOC4332959 KH domain-containing protein At4g18375 [detail] 4332959
5.8 LOC4337006 peroxisome biogenesis protein 6 [detail] 4337006
5.2 LOC9267710 UPF0503 protein At3g09070, chloroplastic [detail] 9267710
5.1 LOC4335673 2-oxoglutarate dehydrogenase, mitochondrial [detail] 4335673
Coexpressed
gene list		 [Coexpressed gene list for LOC4338949]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 4338949      
Refseq ID (protein) XP_015639680.1 
XP_015639681.1 
XP_015639682.1 
XP_015639683.1 


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